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50_kDa_Cathepsin_B
Euk-VirSpodoptera_frugiperda_ascovirus_1a
50_kDa_Cathepsin_B__YP_762469__Spodoptera_frugiperda_ascovirus_1a__113370
Identity
- Accession:
- YP_762469 ↗
- Protein ID:
- 50_kDa_Cathepsin_B
- Kingdom:
- euk
Quality
75.2
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Ascoviridae›
Ascovirus›
Spodoptera_frugiperda_ascovirus_1a
TaxID: 113370
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 26-189_351-367
Domain cluster:
rep: hypothetical_protein_MIV024R__YP_654596__Invertebrate_iridescent_virus_3__345201__D105-246
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00112.30 best | Peptidase_C1 | 48.1 | 2.30e-12 | 86.7% | 48.2% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1xkgA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.82 | 52.0 | 4.31e-01 | 90.1% | 38.6% |
| 1deuB00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.73 | 55.0 | 4.78e-01 | 89.5% | 53.3% |
| 5egwA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.62 | 54.0 | 4.19e-01 | 90.6% | 55.4% |
| 7wd3A02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.51 | 25.0 | 3.46e-01 | 82.3% | 100.0% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3706458 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.83 | 56.0 | 5.72e-01 | 90.1% | 70.3% |
| 4053732 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.82 | 53.0 | 4.33e-01 | 90.1% | 37.6% |
| 3488949 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.82 | 52.0 | 4.73e-01 | 90.1% | 49.4% |
| 4024702 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.81 | 53.0 | 4.65e-01 | 89.5% | 46.7% |
| 3261680 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.78 | 56.0 | 4.66e-01 | 89.0% | 45.3% |
| 3426348 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.78 | 53.0 | 5.49e-01 | 90.1% | 73.5% |
| 4970459 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.76 | 56.0 | 5.23e-01 | 90.6% | 63.3% |
| 3993857 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.75 | 65.0 | 5.29e-01 | 90.6% | 61.0% |
| 3505106 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.73 | 55.0 | 5.58e-01 | 84.5% | 77.8% |
| 3584686 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.70 | 57.0 | 4.94e-01 | 85.6% | 64.1% |
| 3516722 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.68 | 61.0 | 4.09e-01 | 93.4% | 40.0% |
| 4377695 | 219.1.1.2 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1,Propeptide_C1 | 0.68 | 59.0 | 4.77e-01 | 90.6% | 75.9% |
| 3479869 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.67 | 59.0 | 4.77e-01 | 92.3% | 79.6% |
| 3705335 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.65 | 56.0 | 4.89e-01 | 90.6% | 84.6% |
| 3998812 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.64 | 55.0 | 4.40e-01 | 90.1% | 70.6% |
| 4027374 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.64 | 57.0 | 4.76e-01 | 93.4% | 99.7% |
| 3745990 | 219.1.1.110 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1, Peptidase_C1_2 | 0.63 | 53.0 | 4.79e-01 | 90.1% | 66.8% |
| 3674165 | 219.1.1.110 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1, Peptidase_C1_2 | 0.62 | 53.0 | 4.60e-01 | 90.6% | 79.6% |
| 4024199 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.61 | 53.0 | 4.30e-01 | 90.6% | 65.4% |
| 3669025 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.59 | 47.0 | 4.02e-01 | 100.0% | 54.7% |
D2
medium
residues 190-350
Domain cluster:
rep: papain-like_cysteine_peptidase__YP_004347255__Lausannevirus__999883__D243-364
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00112.30 best | Peptidase_C1 | 50.4 | 4.60e-13 | 85.7% | 24.1% |