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5H_04062016_scaffold_1_prodigal-single.1__X__X__00124
Bact-Vir5H_04062016_scaffold_1_prodigal-single.1__X__X__00124
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 27-90
Domain cluster:
rep: IMGVR_UViG_3300009715_000538-3300009715-Ga0116160_100481114__D27-86
D2
high
residues 101-194
Domain cluster:
rep: OV032902.1__CAH0447963.1__SM033_00139__00139__D168-264
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6o38A04 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.81 | 70.0 | 7.24e-01 | 100.0% | 96.6% |
| 6o38A02 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.79 | 71.0 | 7.18e-01 | 98.9% | 98.9% |
| 1qexA02 | 2.60.120.640 | Mainly Beta › Sandwich › Jelly Rolls › gp9 | 0.79 | 73.0 | 7.05e-01 | 100.0% | 95.1% |
| 6o38A01 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.78 | 70.0 | 7.10e-01 | 96.8% | 97.8% |
| 6o38A03 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.77 | 62.0 | 6.61e-01 | 91.5% | 97.6% |
| 4dnyA00 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 67.0 | 6.33e-01 | 98.9% | 87.2% |
| 2nncA00 | 2.60.40.2470 | Mainly Beta › Sandwich › Immunoglobulin-like › SoxY domain | 0.57 | 39.0 | 3.77e-01 | 85.1% | 60.9% |
| 3axsA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 48.0 | 3.38e-01 | 100.0% | 79.8% |
| 4gucA00 | 2.60.40.3720 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 40.0 | 3.73e-01 | 86.2% | 63.5% |
| 3u50C01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 39.0 | 3.56e-01 | 81.9% | 97.6% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 184462 | 520.1.1.1 ↗ | beta sandwiches › gp9 N-terminal domain-like › gp9 N-terminal domain-related › gp9 N-terminal domain-related › T4_gp9_10 | 0.79 | 73.0 | 5.90e-01 | 100.0% | 58.3% |
| 2581337 | 520.2.1.1 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich | 0.78 | 70.0 | 7.06e-01 | 96.8% | 96.8% |
| 2581339 | 520.2.1.1 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich | 0.77 | 69.0 | 6.98e-01 | 100.0% | 96.8% |
| 4994079 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.66 | 32.0 | 3.53e-01 | 72.3% | 57.3% |
| 3276550 | 4312.2.1.0 ↗ | a+b two layers › RelE-like › YaeB-like › YaeB-like | 0.59 | 31.0 | 3.16e-01 | 91.5% | 51.6% |
| 3589620 | 4312.1.1.11 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE-like_toxin | 0.56 | 29.0 | 3.05e-01 | 71.3% | 53.3% |
| 5015045 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 36.0 | 4.04e-01 | 83.0% | 91.4% |
| 4981578 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 43.0 | 4.15e-01 | 100.0% | 78.1% |