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5H_04062016_scaffold_1_prodigal-single.1__X__X__00166
Bact-Vir5H_04062016_scaffold_1_prodigal-single.1__X__X__00166
Identity
- Kingdom:
- phage
Quality
75.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 48-149
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3g0kA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.70 | 48.0 | 4.47e-01 | 70.6% | 93.8% |
| 3f9sB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.67 | 47.0 | 4.19e-01 | 71.6% | 98.6% |
| 2mj7A00 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.67 | 52.0 | 4.64e-01 | 87.3% | 59.6% |
| 1i72A00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.65 | 51.0 | 3.83e-01 | 89.2% | 33.9% |
| 3ehcB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 44.0 | 4.11e-01 | 70.6% | 98.4% |
| 1sjwA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 45.0 | 4.08e-01 | 73.5% | 95.8% |
| 3kkgA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 45.0 | 4.03e-01 | 74.5% | 97.2% |
| 1omoA01 | 3.30.1780.10 | Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 | 0.63 | 43.0 | 3.76e-01 | 70.6% | 56.4% |
| 1yq2A05 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.62 | 55.0 | 3.94e-01 | 97.1% | 97.3% |
| 7wa9A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.61 | 53.0 | 4.86e-01 | 100.0% | 91.5% |
| 1o7dD01 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.61 | 49.0 | 3.65e-01 | 87.3% | 92.7% |
| 1xf8A02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.60 | 45.0 | 3.86e-01 | 79.4% | 66.1% |
| 2g2sA00 | 3.30.1300.40 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.59 | 34.0 | 3.99e-01 | 92.2% | 87.5% |
| 2bngC00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 42.0 | 3.86e-01 | 75.5% | 90.0% |
| 2g18I00 | 3.40.1500.20 | Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › | 0.59 | 51.0 | 3.93e-01 | 97.1% | 89.5% |
| 4fnvA02 | 2.70.98.70 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.59 | 49.0 | 3.63e-01 | 93.1% | 84.4% |
| 3ebtA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 42.0 | 3.88e-01 | 75.5% | 100.0% |
| 2x5gA00 | 3.30.720.60 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.57 | 42.0 | 4.40e-01 | 98.0% | 86.8% |
| 4exrA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 39.0 | 4.27e-01 | 71.6% | 96.3% |
| 2r5vB02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.57 | 45.0 | 3.70e-01 | 97.1% | 45.6% |
| 2zf8A01 | 2.60.40.2540 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 43.0 | 3.81e-01 | 81.4% | 94.2% |
| 3ia8A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 48.0 | 4.17e-01 | 94.1% | 77.8% |
| 3hdjA01 | 3.30.1780.10 | Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 | 0.56 | 41.0 | 3.70e-01 | 75.5% | 69.3% |
| 4n4bA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.56 | 38.0 | 2.73e-01 | 70.6% | 32.6% |
| 3f40A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 38.0 | 3.78e-01 | 71.6% | 96.4% |
| 6gp1A00 | 3.30.1300.40 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.56 | 33.0 | 3.97e-01 | 83.3% | 92.3% |
| 3bgaA05 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.56 | 47.0 | 3.49e-01 | 93.1% | 97.4% |
| 1x99A00 | 2.60.270.20 | Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › Cytolysin/lectin | 0.55 | 49.0 | 4.39e-01 | 100.0% | 94.5% |
| 1kfiA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.55 | 44.0 | 4.17e-01 | 87.3% | 78.4% |
| 2iusD01 | 3.30.980.40 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › | 0.55 | 43.0 | 4.37e-01 | 98.0% | 88.8% |
| 6m9yA00 | 3.30.1300.40 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.54 | 31.0 | 3.84e-01 | 91.2% | 100.0% |
| 1u17A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 38.0 | 3.18e-01 | 75.5% | 83.2% |
| 5b4wA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 41.0 | 2.77e-01 | 87.3% | 60.4% |
| 3lhnA00 | 2.40.128.640 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 34.0 | 3.37e-01 | 94.1% | 63.6% |
| 3ebkB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 37.0 | 3.22e-01 | 94.1% | 47.0% |
| 1i1iP02 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.51 | 43.0 | 3.79e-01 | 93.1% | 62.3% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5043125 | 809.2.1.0 ↗ | a+b two layers › BLIP-like › BT0923-like › BT0923-like | 0.68 | 39.0 | 4.71e-01 | 89.2% | 89.2% |
| 3397338 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.67 | 56.0 | 5.07e-01 | 91.2% | 82.1% |
| 3856140 | 331.2.1.0 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain | 0.66 | 53.0 | 4.83e-01 | 87.3% | 79.3% |
| 3169357 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.65 | 52.0 | 5.08e-01 | 85.3% | 81.8% |
| 3236101 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.65 | 50.0 | 5.11e-01 | 82.4% | 83.0% |
| 4768398 | 331.10.1.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › SAM_decarbox | 0.65 | 50.0 | 3.92e-01 | 88.2% | 38.4% |
| 4011560 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.63 | 47.0 | 3.73e-01 | 79.4% | 83.8% |
| 3512503 | 883.1.1.22 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › PF26547 | 0.62 | 54.0 | 4.58e-01 | 97.1% | 92.6% |
| 3583812 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.62 | 43.0 | 2.83e-01 | 70.6% | 24.8% |
| 3523579 | 883.1.1.10 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › SMP_C2CD2L | 0.62 | 53.0 | 4.31e-01 | 98.0% | 75.7% |
| 4965513 | 331.19.1.5 ↗ | a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains › DUF5784 | 0.60 | 45.0 | 4.48e-01 | 100.0% | 76.2% |
| 3583444 | 9.1.1.12 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › THAP4_heme-bd | 0.60 | 45.0 | 4.36e-01 | 89.2% | 70.4% |
| 3173528 | 331.10.1.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › SAM_decarbox | 0.59 | 50.0 | 3.48e-01 | 93.1% | 84.5% |
| 3296838 | 4099.1.1.14 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Knl1_RWD_C | 0.59 | 42.0 | 4.32e-01 | 72.5% | 87.4% |
| 5009577 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.59 | 51.0 | 4.82e-01 | 99.0% | 87.2% |
| 3505384 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.59 | 43.0 | 3.00e-01 | 75.5% | 28.4% |
| 3744704 | 5.1.4.173 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR75_2nd | 0.58 | 42.0 | 2.88e-01 | 74.5% | 47.4% |
| 3330702 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.58 | 41.0 | 2.92e-01 | 74.5% | 30.8% |
| 3990176 | 883.1.1.22 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › PF26547 | 0.58 | 49.0 | 4.09e-01 | 99.0% | 87.5% |
| 1843010 | 331.19.1.1 ↗ | a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains › RnlA_toxin | 0.58 | 36.0 | 3.99e-01 | 81.4% | 80.0% |
| 3230195 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 39.0 | 2.75e-01 | 70.6% | 28.1% |
| 3940470 | 5.1.4.320 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_LRRK2 | 0.56 | 39.0 | 2.62e-01 | 70.6% | 21.8% |
| 4285345 | 4099.1.1.20 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med14_RM6 | 0.56 | 45.0 | 4.36e-01 | 95.1% | 75.8% |
| 5025792 | 3692.1.1.1 ↗ | a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall | 0.56 | 42.0 | 4.03e-01 | 77.5% | 73.9% |
| 3851566 | 4099.1.1.20 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med14_RM6 | 0.56 | 46.0 | 4.27e-01 | 95.1% | 69.6% |
| 3552038 | 4099.1.1.20 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med14_RM6 | 0.56 | 46.0 | 3.77e-01 | 95.1% | 47.0% |
| 3415098 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.56 | 43.0 | 3.62e-01 | 82.4% | 92.6% |
| 4030047 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 39.0 | 2.66e-01 | 72.5% | 23.1% |
| 3934570 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.55 | 38.0 | 2.62e-01 | 70.6% | 24.8% |
| 3616717 | 5.1.4.407 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, Alsin_RLD | 0.55 | 39.0 | 2.66e-01 | 74.5% | 85.5% |
| 3875237 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.55 | 47.0 | 2.81e-01 | 95.1% | 91.3% |
| 3216630 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 37.0 | 2.57e-01 | 70.6% | 50.0% |
| 2804034 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.54 | 37.0 | 2.54e-01 | 70.6% | 49.9% |
| 3966637 | 304.156.1.0 ↗ | a+b two layers › Alpha-beta plaits › DNA translocase FtsK N-terminal domain › DNA translocase FtsK N-terminal domain | 0.54 | 43.0 | 4.35e-01 | 100.0% | 87.0% |
| 4253075 | 304.156.1.1 ↗ | a+b two layers › Alpha-beta plaits › DNA translocase FtsK N-terminal domain › DNA translocase FtsK N-terminal domain › FtsK_alpha | 0.54 | 44.0 | 4.45e-01 | 99.0% | 91.0% |
| 3228525 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.54 | 44.0 | 4.32e-01 | 92.2% | 82.7% |
| 3962855 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.54 | 36.0 | 3.56e-01 | 92.2% | 62.8% |
| 3704753 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.53 | 40.0 | 3.06e-01 | 79.4% | 75.0% |
| 3932463 | 5084.5.1.3 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 | 0.53 | 44.0 | 3.19e-01 | 88.2% | 96.1% |
| 4000395 | 2007.1.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like | 0.53 | 42.0 | 3.34e-01 | 89.2% | 41.9% |
| 5022918 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 44.0 | 4.03e-01 | 95.1% | 87.4% |
| 3585414 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.51 | 40.0 | 3.91e-01 | 83.3% | 92.7% |