←Back to structures
5H_04062016_scaffold_1_prodigal-single.1__X__X__00229
Bact-Vir5H_04062016_scaffold_1_prodigal-single.1__X__X__00229
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-64
Domain cluster:
rep: OR613466.1__WNT44299.1__SEA_CANDC_88__00088__D8-82
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2cuwA00 | 3.30.1280.10 | Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS | 0.76 | 56.0 | 5.11e-01 | 77.8% | 100.0% |
| 2djwA01 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.68 | 49.0 | 4.66e-01 | 76.2% | 98.6% |
| 2jsxA01 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.66 | 46.0 | 4.45e-01 | 73.0% | 98.6% |
| 2cyyA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.66 | 48.0 | 4.25e-01 | 79.4% | 78.9% |
| 2zbcA01 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.65 | 46.0 | 4.47e-01 | 76.2% | 100.0% |
| 3rgzA02 | 3.30.1490.310 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.63 | 48.0 | 4.85e-01 | 84.1% | 88.5% |
| 2fgcA03 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.61 | 43.0 | 4.11e-01 | 76.2% | 84.2% |
| 3pm9A03 | 3.30.70.2190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 51.0 | 4.19e-01 | 98.4% | 90.9% |
| 4rdlA02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.60 | 44.0 | 3.73e-01 | 79.4% | 56.1% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.58 | 51.0 | 4.83e-01 | 100.0% | 84.2% |
| 3nyiB01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 42.0 | 3.27e-01 | 82.5% | 88.5% |
| 7pupA01 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.57 | 47.0 | 3.30e-01 | 93.7% | 66.5% |
| 1kbaA00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.57 | 40.0 | 4.00e-01 | 81.0% | 71.2% |
| 7ejoB01 | 3.30.2260.10 | Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary | 0.57 | 41.0 | 3.77e-01 | 77.8% | 72.3% |
| 5v7qZ00 | 3.30.1390.20 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L30; Chain: A, › Ribosomal protein L30/L7 | 0.56 | 40.0 | 4.12e-01 | 76.2% | 100.0% |
| 5yppA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.56 | 43.0 | 3.94e-01 | 87.3% | 94.4% |
| 2jvfA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.56 | 40.0 | 3.59e-01 | 77.8% | 54.3% |
| 2gmlA02 | 3.30.70.1560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Alpha-L RNA-binding motif | 0.56 | 40.0 | 3.88e-01 | 79.4% | 100.0% |
| 2qmwA03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.55 | 39.0 | 3.69e-01 | 76.2% | 100.0% |
| 4lvnP00 | 3.30.70.2380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 40.0 | 3.79e-01 | 84.1% | 96.3% |
| 2jheA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.52 | 40.0 | 3.75e-01 | 87.3% | 96.3% |
| 3mdnD00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.52 | 42.0 | 2.99e-01 | 93.7% | 37.2% |
| 4nohA01 | 3.30.70.3060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 38.0 | 3.72e-01 | 79.4% | 97.2% |
| 4dzdA02 | 3.30.70.1210 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 2 | 0.52 | 40.0 | 3.28e-01 | 85.7% | 95.1% |
| 6lxgA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.52 | 37.0 | 3.57e-01 | 76.2% | 100.0% |
| 4aukA01 | 3.30.70.2810 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 40.0 | 3.82e-01 | 88.9% | 100.0% |
| 2q18X01 | 3.10.330.40 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.51 | 35.0 | 3.46e-01 | 92.1% | 65.7% |
| 4wiwA02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.51 | 35.0 | 3.48e-01 | 73.0% | 100.0% |
| 1vi7A01 | 3.30.230.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › Impact, N-terminal domain | 0.51 | 43.0 | 3.49e-01 | 100.0% | 88.1% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3941732 | 3115.6.1.0 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon | 0.72 | 50.0 | 5.51e-01 | 77.8% | 92.0% |
| 4008166 | 3115.1.1.10 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › PF27430 | 0.71 | 61.0 | 5.29e-01 | 95.2% | 94.7% |
| 5012895 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.70 | 51.0 | 5.37e-01 | 77.8% | 100.0% |
| 5067865 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.67 | 51.0 | 5.00e-01 | 82.5% | 90.0% |
| 4977774 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.67 | 46.0 | 4.51e-01 | 73.0% | 100.0% |
| 3287039 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.66 | 48.0 | 4.23e-01 | 79.4% | 78.9% |
| 4944201 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.65 | 45.0 | 4.39e-01 | 73.0% | 100.0% |
| 3666083 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.65 | 53.0 | 4.48e-01 | 93.7% | 99.1% |
| 4930005 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.64 | 49.0 | 4.39e-01 | 84.1% | 90.0% |
| 5030904 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.64 | 44.0 | 4.30e-01 | 73.0% | 100.0% |
| 4994799 | 304.16.1.1 ↗ | a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE | 0.63 | 46.0 | 4.28e-01 | 77.8% | 96.2% |
| 3959955 | 304.163.1.3 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › PF31118 | 0.63 | 43.0 | 4.89e-01 | 76.2% | 100.0% |
| 3797657 | 304.55.2.0 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like | 0.63 | 45.0 | 3.84e-01 | 77.8% | 98.2% |
| 5059379 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.63 | 45.0 | 4.42e-01 | 77.8% | 97.1% |
| 3634674 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.63 | 53.0 | 3.33e-01 | 96.8% | 57.5% |
| 5026971 | 304.16.1.1 ↗ | a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE | 0.62 | 45.0 | 4.14e-01 | 77.8% | 100.0% |
| 4047960 | 304.16.1.1 ↗ | a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE | 0.61 | 43.0 | 4.01e-01 | 76.2% | 96.5% |
| 3668465 | 304.120.1.9 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › MBTP1_N | 0.61 | 45.0 | 4.20e-01 | 79.4% | 100.0% |
| 5065806 | 304.8.1.7 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ALS_ss_C | 0.61 | 42.0 | 4.16e-01 | 74.6% | 92.9% |
| 5007483 | 304.6.1.1 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C | 0.61 | 51.0 | 3.51e-01 | 100.0% | 63.2% |
| 4021062 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.60 | 44.0 | 4.49e-01 | 77.8% | 98.3% |
| 3591023 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.60 | 43.0 | 4.01e-01 | 76.2% | 93.8% |
| 5011383 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.60 | 44.0 | 4.48e-01 | 77.8% | 91.7% |
| 4968326 | 304.16.1.1 ↗ | a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE | 0.59 | 42.0 | 3.91e-01 | 77.8% | 96.5% |
| 4953363 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.59 | 45.0 | 2.67e-01 | 84.1% | 12.8% |
| 4952659 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.59 | 42.0 | 4.10e-01 | 76.2% | 100.0% |
| 5054197 | 304.16.1.1 ↗ | a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE | 0.59 | 42.0 | 3.96e-01 | 77.8% | 96.2% |
| 4969863 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.58 | 52.0 | 4.93e-01 | 100.0% | 85.3% |
| 1678098 | 1.1.7.56 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Arabinose_Iso_C | 0.58 | 50.0 | 3.75e-01 | 100.0% | 52.1% |
| 3185591 | 3792.1.1.0 ↗ | beta sandwiches › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain | 0.58 | 43.0 | 3.52e-01 | 79.4% | 47.8% |
| 5063230 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.57 | 41.0 | 3.98e-01 | 79.4% | 96.0% |
| 4936431 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.57 | 41.0 | 3.96e-01 | 79.4% | 96.0% |
| 5052827 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.57 | 42.0 | 4.13e-01 | 82.5% | 100.0% |
| 5075731 | 3435.1.1.0 ↗ | a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC | 0.55 | 43.0 | 3.74e-01 | 90.5% | 58.1% |
| 3415245 | 4342.1.1.1 ↗ | alpha complex topology › Tex N-terminal region-like › Tex N-terminal region-like › Tex N-terminal region-like › Tex_central_region | 0.54 | 39.0 | 2.79e-01 | 77.8% | 25.5% |
| 4970609 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.54 | 38.0 | 3.70e-01 | 76.2% | 100.0% |
| 4006107 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.52 | 40.0 | 3.83e-01 | 87.3% | 100.0% |
| 3942221 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.51 | 41.0 | 3.97e-01 | 95.2% | 100.0% |