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5H_04062016_scaffold_1_prodigal-single.1__X__X__00324
Bact-Vir5H_04062016_scaffold_1_prodigal-single.1__X__X__00324
Identity
- Kingdom:
- phage
Quality
87.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-87
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4devD01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 43.0 | 3.70e-01 | 90.8% | 100.0% |
| 1z2zA01 | 3.30.2350.20 | Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › TruD, catalytic domain | 0.52 | 36.0 | 2.59e-01 | 72.4% | 56.5% |
| 4cshA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.52 | 42.0 | 3.34e-01 | 90.8% | 49.4% |
| 4bi3A01 | 3.90.1720.80 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.52 | 41.0 | 3.90e-01 | 89.5% | 79.1% |
| 1yhpA01 | 2.60.20.10 | Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › Crystallins | 0.51 | 38.0 | 3.62e-01 | 82.9% | 72.8% |
| 3m70A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 41.0 | 3.81e-01 | 97.4% | 97.2% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3394062 | 11.10.1.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 | 0.52 | 40.0 | 3.36e-01 | 86.8% | 97.2% |
| 3231163 | 390.1.1.4 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › MANEC | 0.52 | 34.0 | 3.38e-01 | 89.5% | 62.4% |
| 3791083 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.51 | 34.0 | 3.37e-01 | 89.5% | 62.4% |
| 3298989 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 39.0 | 3.58e-01 | 88.2% | 72.7% |
| 4569833 | 221.1.5.2 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Chemotaxis inhibitory protein CHIPS › FPRL1_inhibitor | 0.51 | 37.0 | 3.38e-01 | 78.9% | 81.6% |
| 3796759 | 4.1.1.287 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5641 | 0.50 | 36.0 | 3.38e-01 | 76.3% | 77.9% |
| 5062248 | 4261.1.1.0 ↗ | a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like | 0.50 | 41.0 | 3.97e-01 | 96.1% | 100.0% |