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5H_04062016_scaffold_1_prodigal-single.1__X__X__00374
Bact-Vir5H_04062016_scaffold_1_prodigal-single.1__X__X__00374
Identity
- Kingdom:
- phage
Quality
92.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-88
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7ejoB01 | 3.30.2260.10 | Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary | 0.65 | 50.0 | 5.15e-01 | 97.7% | 85.5% |
| 2nmlA00 | 3.30.2260.10 | Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary | 0.60 | 51.0 | 4.85e-01 | 97.7% | 79.0% |
| 3wo4B01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 34.0 | 3.32e-01 | 97.7% | 52.6% |
| 3c9aA01 | 2.20.20.160 | Mainly Beta › Single Sheet › Anthopleurin-A › | 0.53 | 33.0 | 3.48e-01 | 93.0% | 69.7% |
| 1va9A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 34.0 | 3.05e-01 | 97.7% | 45.9% |
| 1wgpA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 33.0 | 3.04e-01 | 94.2% | 46.3% |
| 2v3sA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.52 | 37.0 | 3.59e-01 | 97.7% | 66.7% |
| 3cetB01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 37.0 | 3.49e-01 | 79.1% | 94.5% |
| 3r5dA01 | 3.30.70.2010 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 44.0 | 3.89e-01 | 100.0% | 93.8% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3285401 | 3986.2.1.0 ↗ | a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd | 0.68 | 41.0 | 4.41e-01 | 97.7% | 69.3% |
| 3576143 | 221.1.1.113 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA_3 | 0.65 | 46.0 | 4.23e-01 | 94.2% | 57.3% |
| 2771923 | 4326.1.1.1 ↗ | a+b two layers › ERH-like › ERH-like › ERH-like › ER | 0.65 | 50.0 | 4.82e-01 | 97.7% | 73.7% |
| 3734833 | 304.14.1.0 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) | 0.64 | 56.0 | 5.59e-01 | 95.3% | 97.8% |
| None | — | 0.62 | 51.0 | 4.93e-01 | 97.7% | 81.1% | |
| 4028523 | 4326.1.1.1 ↗ | a+b two layers › ERH-like › ERH-like › ERH-like › ER | 0.60 | 50.0 | 4.91e-01 | 97.7% | 83.2% |
| 3923043 | 4326.1.1.1 ↗ | a+b two layers › ERH-like › ERH-like › ERH-like › ER | 0.58 | 50.0 | 4.79e-01 | 97.7% | 81.0% |
| 4175430 | 1119.1.1.1 ↗ | a+b complex topology › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › BioW | 0.56 | 44.0 | 3.20e-01 | 86.0% | 59.3% |
| 3464654 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.55 | 35.0 | 3.22e-01 | 95.3% | 47.0% |
| 4939739 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.52 | 34.0 | 3.99e-01 | 97.7% | 98.3% |
| 3652660 | 210.2.1.1 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C | 0.51 | 39.0 | 2.87e-01 | 82.6% | 84.9% |
| 3584885 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.51 | 32.0 | 3.61e-01 | 98.8% | 88.3% |
| 4967222 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.51 | 34.0 | 3.92e-01 | 98.8% | 98.3% |