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5H_04062016_scaffold_1_prodigal-single.1__X__X__00390
Bact-Vir5H_04062016_scaffold_1_prodigal-single.1__X__X__00390
Identity
- Kingdom:
- phage
Quality
95.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-39
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4m0nA02 | 3.55.50.30 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.56 | 43.0 | 3.57e-01 | 91.9% | 83.1% |
| 2xqnT01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.55 | 42.0 | 3.71e-01 | 89.2% | 61.3% |
| 2a22B00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.53 | 41.0 | 2.73e-01 | 100.0% | 84.7% |
| 4r5qA00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.51 | 37.0 | 2.36e-01 | 100.0% | 14.4% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3436774 | 207.1.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRRNT_2 | 0.60 | 42.0 | 2.44e-01 | 75.7% | 15.0% |
| 3211439 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.56 | 41.0 | 4.31e-01 | 86.5% | 100.0% |
| 4019307 | 304.37.1.1 ↗ | a+b two layers › Alpha-beta plaits › Sulfite reductase, domains 1 and 3 › Sulfite reductase, domains 1 and 3 › NIR_SIR_ferr | 0.54 | 38.0 | 2.68e-01 | 73.0% | 62.9% |
| 4024019 | 325.1.8.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein | 0.53 | 40.0 | 3.85e-01 | 97.3% | 100.0% |
| 3973328 | 7523.1.1.15 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate | 0.52 | 39.0 | 3.10e-01 | 100.0% | 93.3% |
| 3266609 | 388.1.1.0 ↗ | few secondary structure elements › Huristasin-like › Huristasin-like › Huristasin-like | 0.52 | 34.0 | 3.42e-01 | 83.8% | 96.0% |
| 4605339 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.51 | 35.0 | 2.39e-01 | 73.0% | 18.6% |
| 3524550 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.50 | 36.0 | 3.21e-01 | 89.2% | 57.1% |