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5H_04062016_scaffold_1_prodigal-single.1__X__X__00448
Bact-Vir5H_04062016_scaffold_1_prodigal-single.1__X__X__00448
Identity
- Kingdom:
- phage
Quality
66.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 11-89
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2bskB00 | 1.10.287.810 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Mitochondrial import inner membrane translocase subunit tim13 like domains | 0.60 | 40.0 | 4.40e-01 | 83.5% | 84.6% |
| 3f1iS00 | 1.20.5.1940 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.56 | 38.0 | 3.92e-01 | 70.9% | 75.3% |
| 2ipcA04 | 1.10.3060.10 | Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA | 0.54 | 48.0 | 3.44e-01 | 100.0% | 58.3% |
| 1hr7C02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.53 | 32.0 | 2.32e-01 | 75.9% | 21.3% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3219393 | 106.1.1.1 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › Globin | 0.62 | 42.0 | 3.24e-01 | 86.1% | 32.0% |
| 3494198 | 328.7.1.0 ↗ | a+b two layers › IF3-like › Smr domain › Smr domain | 0.61 | 45.0 | 3.43e-01 | 78.5% | 86.3% |
| 3858777 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.54 | 37.0 | 3.73e-01 | 70.9% | 71.2% |
| 3641266 | 6158.1.1.0 ↗ | alpha bundles › Nucleoporin p58/p45 helical region › Nucleoporin p58/p45 helical region › Nucleoporin p58/p45 helical region | 0.53 | 43.0 | 4.19e-01 | 97.5% | 91.6% |
| 4221168 | 109.4.1.1252 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HAMP | 0.51 | 35.0 | 3.04e-01 | 70.9% | 63.8% |
| 3600710 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 41.0 | 2.89e-01 | 87.3% | 96.7% |
| 3203850 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.50 | 42.0 | 3.52e-01 | 89.9% | 93.8% |