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5H_04062016_scaffold_1_prodigal-single.1__X__X__00464
Bact-Vir5H_04062016_scaffold_1_prodigal-single.1__X__X__00464
Identity
- Kingdom:
- phage
Quality
78.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 65-163
Domain cluster:
rep: MN871446.1__UKS71963.1__KpLz245_0970__00097__D488-572
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF26209.2 best | Phage_phiTE_241_C | 49.5 | 4.90e-13 | 81.8% | 85.4% |
D2
high
residues 169-309
Domain cluster:
rep: scnpilot_solids2_trim150_scaffold_133_prodigal-single.1__X__X__00270__D508-617
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2waaA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.65 | 41.0 | 4.34e-01 | 81.6% | 71.5% |
| 3h8uA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.62 | 34.0 | 3.64e-01 | 79.4% | 59.8% |
| 3es1A02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.61 | 31.0 | 3.26e-01 | 77.3% | 51.6% |
| 2c4xA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 33.0 | 4.00e-01 | 90.8% | 84.0% |
| 4d0qA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.58 | 34.0 | 3.25e-01 | 84.4% | 49.7% |
| 3skvA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.58 | 39.0 | 3.84e-01 | 100.0% | 63.6% |
| 4xvhA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.57 | 40.0 | 4.55e-01 | 100.0% | 96.3% |
| 1svbA04 | 2.60.40.350 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 30.0 | 3.56e-01 | 85.1% | 74.0% |
| 2mngA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 31.0 | 3.23e-01 | 95.0% | 55.7% |
| 6v55A01 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.56 | 34.0 | 3.71e-01 | 77.3% | 74.1% |
| 4dxzA00 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 33.0 | 3.69e-01 | 91.5% | 73.9% |
| 2kd7A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 37.0 | 3.55e-01 | 75.9% | 57.9% |
| 3cu7A10 | 2.60.120.1540 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 34.0 | 3.73e-01 | 77.3% | 73.9% |
| 2wz8A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 36.0 | 3.71e-01 | 75.2% | 68.9% |
| 1wgoA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 33.0 | 3.91e-01 | 96.5% | 86.9% |
| 6m3aA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 27.0 | 3.68e-01 | 85.8% | 98.5% |
| 2id4A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 33.0 | 3.33e-01 | 85.1% | 60.9% |
| 1p8jA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 37.0 | 3.86e-01 | 90.8% | 77.3% |
| 4kncA02 | 2.60.120.1380 | Mainly Beta › Sandwich › Jelly Rolls › C-terminal carbohydrate-binding module | 0.52 | 36.0 | 3.86e-01 | 76.6% | 82.9% |
| 1x5aA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 31.0 | 3.64e-01 | 90.1% | 89.0% |
| 1sefA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 30.0 | 3.20e-01 | 85.1% | 66.4% |
| 5tpvB00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 32.0 | 3.32e-01 | 73.0% | 65.2% |
| 3l5iA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 30.0 | 3.76e-01 | 96.5% | 95.5% |
| 4mzuF02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 32.0 | 3.22e-01 | 73.0% | 60.8% |
| 2mcaA00 | 2.60.40.2890 | Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF5300 | 0.51 | 34.0 | 3.90e-01 | 88.7% | 93.2% |
| 2q1fA01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.50 | 36.0 | 3.40e-01 | 77.3% | 62.3% |
| 3bn6A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.50 | 35.0 | 3.39e-01 | 75.2% | 63.3% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4940416 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.62 | 35.0 | 4.54e-01 | 89.4% | 97.5% |
| 4063161 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.61 | 33.0 | 3.95e-01 | 75.2% | 77.9% |
| 5050763 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.60 | 35.0 | 3.89e-01 | 75.2% | 70.4% |
| 2411956 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.60 | 36.0 | 3.73e-01 | 75.2% | 63.2% |
| 3206860 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.59 | 31.0 | 3.61e-01 | 95.7% | 68.3% |
| 3227541 | 10.4.1.9 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB_2 | 0.59 | 34.0 | 3.82e-01 | 77.3% | 74.3% |
| 5018349 | 11.1.1.284 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD_4 | 0.58 | 33.0 | 4.25e-01 | 90.1% | 94.1% |
| 4945189 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 33.0 | 4.26e-01 | 97.2% | 95.3% |
| 381831 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.57 | 30.0 | 3.49e-01 | 95.7% | 71.1% |
| 2326112 | 10.32.1.56 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CE2_N | 0.57 | 40.0 | 4.53e-01 | 82.3% | 95.4% |
| 3849252 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 32.0 | 3.97e-01 | 90.1% | 90.0% |
| 4945315 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 33.0 | 4.07e-01 | 96.5% | 92.2% |
| 5020586 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 44.0 | 4.23e-01 | 96.5% | 74.4% |
| 3994735 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.54 | 34.0 | 3.65e-01 | 77.3% | 72.8% |
| 3219055 | 10.4.1.32 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB_M02D8_5_2nd | 0.53 | 33.0 | 3.51e-01 | 77.3% | 68.8% |
| 5056533 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 31.0 | 3.85e-01 | 96.5% | 95.3% |
| 5029369 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 32.0 | 3.95e-01 | 91.5% | 98.8% |
| 3945527 | 10.32.1.239 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › FNIII-A_GpJ | 0.52 | 37.0 | 3.79e-01 | 85.1% | 76.3% |
| 3880283 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.51 | 31.0 | 3.74e-01 | 90.8% | 92.2% |
| 5062241 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 31.0 | 3.90e-01 | 73.8% | 100.0% |