60kDa_protein

Euk-Vir

Grapevine_leafroll-associated_virus_10

60kDa_protein__YP_002364306__Grapevine_leafroll-associated_virus_10__367121

Identity

71.9 mean pLDDT

Orthornavirae› Kitrinoviricota› Alsuviricetes› Martellivirales› Closteroviridae› Ampelovirus› Grapevine_leafroll-associated_virus_10

TaxID: 367121

Singleton — not in a non-trivial cluster

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-123

PDB

Domain cluster: rep: p60_gene_product__YP_004901690__Grapevine_leafroll-associated_virus_5__71032__D10-123

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03225.20 best	Viral_Hsp90	56.4	2.90e-15	94.7%	21.3%

D2 high residues 381-498

PDB

Domain cluster: rep: Hsp90__YP_010086803__Pistachio_ampelovirus_A__2093224__D326-483

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03225.20 best	Viral_Hsp90	106.3	2.20e-30	97.5%	22.5%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3sooA01	3.30.250.20	Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › L1 transposable element, C-terminal domain	0.51	20.0	2.56e-01	92.4%	56.5%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5065366	601.1.1.0 ↗	alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin	0.54	42.0	4.26e-01	83.9%	92.5%
3996666	145.1.1.0 ↗	alpha arrays › F-box domain › F-box domain › F-box domain	0.52	33.0	3.44e-01	88.1%	66.4%
3697964	206.1.1.74 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, PK_Tyr_Ser-Thr	0.52	39.0	2.81e-01	79.7%	81.9%
3789193	109.4.1.560 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Mus7	0.51	43.0	2.76e-01	93.2%	32.6%
3593574	206.1.1.1 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase	0.51	38.0	2.77e-01	79.7%	73.7%
4298539	2500.1.1.2 ↗	a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC	0.51	40.0	2.66e-01	86.4%	89.3%

D3 medium residues 141-191_204-335

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03225.20 best	Viral_Hsp90	92.9	2.50e-26	98.9%	33.4%