61_kDa_protein

Euk-Vir

Blackcurrant-associated_closterovirus_1

61_kDa_protein__YP_009553644__Blackcurrant-associated_closterovirus_1__2338394

Identity

71.1 mean pLDDT

Orthornavirae› Kitrinoviricota› Alsuviricetes› Martellivirales› Closteroviridae› Closterovirus› Blackcurrant-associated_closterovirus_1

TaxID: 2338394

View cluster (11 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 185-315

PDB

D2 high residues 328-485

PDB

Domain cluster: rep: p64__YP_008858534__Carnation_yellow_fleck_virus__940280__D331-495

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03225.20 best	Viral_Hsp90	97.5	9.70e-28	99.4%	28.9%

D3 medium residues 12-97

PDB

Domain cluster: rep: p54__YP_003075969__Carrot_yellow_leaf_virus__656190__D13-92

CATH (9)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4dg8A01	3.40.50.12780	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain	0.56	42.0	2.77e-01	81.4%	52.1%
4fuqC01	3.40.50.12780	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain	0.55	41.0	2.74e-01	81.4%	57.2%
1yowA00	1.10.565.10	Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor	0.54	39.0	2.88e-01	86.0%	28.3%
3u1nB01	1.10.3210.10	Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432	0.54	40.0	2.72e-01	79.1%	27.1%
2w4sA00	1.10.10.1440	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PHAX RNA-binding domain	0.52	38.0	3.84e-01	100.0%	77.9%
4oxiA01	3.40.50.12780	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain	0.52	38.0	2.51e-01	80.2%	56.2%
3py8A04	1.10.150.20	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain	0.51	37.0	3.14e-01	75.6%	66.0%
2p1aB01	1.20.120.450	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain	0.51	36.0	3.14e-01	75.6%	91.1%
4dsfA04	1.10.150.20	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain	0.50	35.0	3.31e-01	74.4%	80.9%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3738702	592.2.1.2 ↗	alpha arrays › PWI domain-like › YugE-like › YugE-like › WGG	0.50	36.0	3.21e-01	75.6%	56.0%

D4 medium residues 123-168

PDB

Domain cluster: representative

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3bosA02	1.10.8.60	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 ›	0.66	51.0	4.57e-01	84.8%	79.1%