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6K1_protein
Euk-VirBasella_rugose_mosaic_virus
6K1_protein__YP_006405407__Basella_rugose_mosaic_virus__373398
Identity
- Accession:
- YP_006405407 ↗
- Protein ID:
- 6K1_protein
- Kingdom:
- euk
Quality
70.9
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Stelpaviricetes›
Patatavirales›
Potyviridae›
Potyvirus›
Basella_rugose_mosaic_virus
TaxID: 373398
Cluster
View cluster (66 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-52
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13608.11 best | Potyvirid-P3 | 42.5 | 6.90e-11 | 100.0% | 11.3% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2z3xA00 | 6.10.10.80 | Special › Helix non-globular › Helicase, Ruva Protein; domain 3 › Small, acid-soluble spore protein, alpha/beta type-like | 0.65 | 48.0 | 4.73e-01 | 84.6% | 75.0% |
| 2k53A00 | 1.10.3910.10 | Mainly Alpha › Orthogonal Bundle › SP0561-like › SP0561-like | 0.63 | 44.0 | 4.01e-01 | 73.1% | 94.3% |
| 1k9uA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.56 | 39.0 | 3.51e-01 | 80.8% | 51.3% |
| 5izdA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.55 | 47.0 | 2.98e-01 | 98.1% | 38.0% |
| 2cqqA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.53 | 38.0 | 3.60e-01 | 78.8% | 65.7% |