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83R_protein
Euk-VirYaba-like_disease_virus
83R_protein__NP_073468__Yaba-like_disease_virus__132475
Identity
- Accession:
- NP_073468 ↗
- Protein ID:
- 83R_protein
- Kingdom:
- euk
Quality
75.8
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Yatapoxvirus›
Yaba-like_disease_virus
TaxID: 132475
Cluster
View cluster (30 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 62-228
Domain cluster:
rep: NTPase,_DNA_primase__YP_009408038__Eptesipox_virus__1329402__D10-229
D2
high
residues 230-320
D3
high
residues 695-782
Domain cluster:
rep: D5-like_helicase-primase__YP_009162463__Salmon_gill_poxvirus__1680908__D732-817
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03288.23 best | Pox_D5 | 65.0 | 9.70e-18 | 100.0% | 89.5% |
D4
medium
residues 6-61
D5
medium
residues 326-400
Domain cluster:
rep: NTPase__YP_784303__Nile_crocodilepox_virus__1285600__D325-405
D6
medium
residues 458-493_513-527_623-694
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1z21A00 | 1.10.10.1000 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Type III secretion system virulence factor YopR, core domain | 0.57 | 27.0 | 3.01e-01 | 87.0% | 52.1% |
| 6k4yI00 | 1.10.1810.10 | Mainly Alpha › Orthogonal Bundle › Anti-sigma factor AsiA › Anti-Sigma Factor A | 0.51 | 33.0 | 3.78e-01 | 94.3% | 93.2% |
| 3bjdA01 | 1.10.1240.20 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Lytic transglycosylase, superhelical linker domain | 0.50 | 29.0 | 3.29e-01 | 93.5% | 77.3% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3559446 | 376.1.3.32 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › RH_dom | 0.60 | 27.0 | 3.02e-01 | 92.7% | 51.0% |
| 4177291 | 7510.1.1.5 ↗ | a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › PdxA | 0.50 | 35.0 | 3.05e-01 | 71.5% | 97.9% |
D7
medium
residues 494-512_528-622
Domain cluster:
rep: MN062720.1__QDP45567.1__SEA_FUZZBUSTER_83__00083__D568-722_747-764