←Back to structures

84_kDa_protein

Euk-Vir

Penicillium_janczewskii_chrysovirus_1

84_kDa_protein__YP_009182337__Penicillium_janczewskii_chrysovirus_1__1755792

Identity

Accession:: YP_009182337 ↗
Protein ID:: 84_kDa_protein
Kingdom:: euk

Quality

64.5 mean pLDDT

Taxonomy

Orthornavirae› Duplornaviricota› Chrymotiviricetes› Ghabrivirales› Chrysoviridae› Betachrysovirus› Penicillium_janczewskii_chrysovirus_1

TaxID: 1755792

Cluster

View cluster (9 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 145-341

PDB

D2 high residues 612-758

PDB

Domain cluster: rep: putative_coat_protein__YP_009158915__Fusarium_oxysporum_f._sp._dianthi_mycovirus_1__1679238__D675-740_754-821

D3 medium residues 66-99_429-528

PDB

Domain cluster: rep: hypothetical_protein_KM537_s3gp1__YP_010085113__Fusarium_graminearum_dsRNA_mycovirus_2__254946__D465-586

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
6x3aA02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.53	28.0	3.12e-01	98.5%	64.4%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4886584	3115.6.1.1 ↗	a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › RpoY	0.61	25.0	3.41e-01	96.3%	72.9%
5014676	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.54	25.0	2.98e-01	94.8%	62.4%
5043571	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.53	24.0	2.79e-01	95.5%	56.0%

D4 medium residues 351-428

PDB

Domain cluster: representative

CATH (17)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5wvoC02	1.10.10.2230	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A ›	0.64	46.0	4.50e-01	88.5%	68.2%
1lj8A02	1.10.1040.10	Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2	0.61	52.0	3.94e-01	98.7%	46.9%
1y9qA01	1.10.260.40	Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains	0.61	45.0	4.41e-01	78.2%	98.8%
3hw5B00	3.40.91.90	Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Influenza RNA-dependent RNA polymerase subunit PA, endonuclease domain	0.58	42.0	3.31e-01	79.5%	81.1%
2fi1A02	1.10.150.240	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2	0.57	43.0	4.72e-01	96.2%	100.0%
1hlbA00	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.56	43.0	3.57e-01	87.2%	86.6%
1chuA03	1.20.58.100	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain	0.55	34.0	3.29e-01	100.0%	55.7%
3iqcA00	1.20.120.340	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS	0.54	46.0	4.08e-01	97.4%	95.8%
1y7yA00	1.10.260.40	Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains	0.53	38.0	4.02e-01	75.6%	100.0%
4ghjB00	1.10.260.40	Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains	0.53	40.0	4.05e-01	79.5%	90.8%
3o6xA02	1.20.120.1560	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) ›	0.52	34.0	2.75e-01	100.0%	35.8%
3ivpD01	1.10.260.40	Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains	0.52	36.0	3.66e-01	70.5%	96.0%
1u89A00	1.20.120.230	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like	0.51	42.0	3.48e-01	89.7%	72.7%
6wv5A01	1.20.1440.130	Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › VKOR domain	0.51	38.0	3.26e-01	82.1%	74.3%
2ip6A00	1.20.1440.140	Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) ›	0.51	41.0	3.99e-01	88.5%	97.7%
3u3wA01	1.10.260.40	Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains	0.50	36.0	3.80e-01	79.5%	87.0%
3ed5A02	1.10.150.240	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2	0.50	43.0	4.27e-01	94.9%	100.0%

ECOD (19)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4367316	101.1.4.3 ↗	alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3	0.65	44.0	3.87e-01	70.5%	67.8%
3709421	604.12.1.2 ↗	alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › Vta1	0.64	36.0	3.52e-01	100.0%	50.6%
4125089	4044.1.1.1 ↗	alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Prismane	0.61	47.0	3.91e-01	83.3%	67.4%
3692194	6155.1.1.0 ↗	alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter	0.60	32.0	3.24e-01	96.2%	52.5%
3837602	2.1.1.0 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein	0.59	50.0	3.36e-01	96.2%	44.3%
5002559	2.21.1.0 ↗	beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB)	0.58	48.0	3.81e-01	96.2%	44.2%
3941994	131.1.1.3 ↗	alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD	0.57	49.0	3.80e-01	100.0%	75.3%
3612308	604.3.1.0 ↗	alpha bundles › Spectrin repeat-like › BAG domain › BAG domain	0.57	40.0	3.54e-01	73.1%	85.0%
5029389	601.17.1.0 ↗	alpha bundles › Four-helical up-and-down bundle › Group V grass pollen allergen › Group V grass pollen allergen	0.57	49.0	4.02e-01	96.2%	75.9%
4522145	5050.1.1.54 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Mntp	0.56	49.0	3.77e-01	100.0%	95.0%
4381446	3896.1.1.0 ↗	alpha duplicates or obligate multimers › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase	0.55	45.0	3.25e-01	92.3%	44.6%
5048081	604.12.1.0 ↗	alpha bundles › Spectrin repeat-like › MIT domain › MIT domain	0.52	35.0	3.61e-01	98.7%	72.0%
4943123	604.12.1.134 ↗	alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › AAA	0.52	35.0	3.43e-01	100.0%	64.7%
3240455	604.1.1.0 ↗	alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat	0.51	34.0	3.27e-01	94.9%	58.9%
3820947	109.3.1.40 ↗	alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PGG	0.51	40.0	3.39e-01	87.2%	52.9%
4028201	192.29.1.0 ↗	alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding)	0.51	40.0	3.67e-01	88.5%	87.3%
3506685	1134.1.1.0 ↗	alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain	0.51	35.0	3.64e-01	88.5%	74.7%
4947260	604.12.1.0 ↗	alpha bundles › Spectrin repeat-like › MIT domain › MIT domain	0.51	34.0	3.45e-01	98.7%	67.5%
4998520	604.12.1.1 ↗	alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT	0.51	37.0	3.78e-01	78.2%	78.7%