98L

Euk-Vir

Yaba_monkey_tumor_virus

98L__NP_938353__Yaba_monkey_tumor_virus__38804

Identity

73.1 mean pLDDT

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Yatapoxvirus› Yaba_monkey_tumor_virus

TaxID: 38804

View cluster (30 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-157

PDB

Domain cluster: rep: early_transcription_factor_-VETF-_large_subunit__YP_009162477__Salmon_gill_poxvirus__1680908__D11-143

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04441.20 best	Pox_VERT_large	259.2	1.20e-76	100.0%	21.3%

D2 high residues 179-271

PDB

Domain cluster: rep: ORF083_early_transcription_factor_VETFL__NP_957860__Orf_virus__10258__D309-347_361-410

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04441.20 best	Pox_VERT_large	123.4	1.40e-35	100.0%	13.2%

D3 high residues 275-357

PDB

D4 high residues 370-457

PDB

Domain cluster: rep: early_transcription_factor_large_subunit_VETF-L__YP_009046167__Penguinpox_virus__648998__D379-458

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04441.20 best	Pox_VERT_large	161.6	3.90e-47	100.0%	12.5%

D5 high residues 641-708

PDB

D6 medium residues 458-517

PDB

D7 medium residues 518-607

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04441.20 best	Pox_VERT_large	108.1	5.70e-31	100.0%	12.9%

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4boqA00	3.90.70.80	Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A ›	0.67	57.0	4.54e-01	92.2%	84.0%
3v8vA01	3.30.2130.30	Alpha Beta › 2-Layer Sandwich › VC0802-like ›	0.58	46.0	3.59e-01	87.8%	61.8%
2jl8102	3.30.160.850	Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain ›	0.52	19.0	2.53e-01	85.6%	55.6%
4hjwA00	3.20.20.140	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases	0.51	42.0	2.90e-01	96.7%	51.2%
4m7xA01	3.30.420.40	Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain	0.51	34.0	3.48e-01	71.1%	96.7%
1ndbA02	3.30.559.70	Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Choline/Carnitine o-acyltransferase, domain 2	0.50	44.0	3.08e-01	100.0%	85.7%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3593332	219.1.1.0 ↗	a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases	0.66	56.0	4.61e-01	93.3%	90.3%
3707160	219.1.1.15 ↗	a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU	0.66	57.0	4.66e-01	93.3%	93.1%
3328891	4.1.1.296 ↗	beta barrels › SH3 › SH3 › SH3 › TDBD	0.61	27.0	3.12e-01	87.8%	52.3%
3593922	323.1.1.0 ↗	a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases	0.56	43.0	2.65e-01	83.3%	74.1%
3614206	213.1.1.31 ↗	a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_10	0.52	43.0	3.23e-01	98.9%	75.2%
3882636	214.1.1.11 ↗	a+b two layers › SH2 › SH2 › SH2 › PF27628	0.50	37.0	3.34e-01	78.9%	95.4%