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A104R
Euk-VirAfrican_swine_fever_virus
A104R__YP_009703090__African_swine_fever_virus__10497
Identity
- Accession:
- YP_009703090 ↗
- Protein ID:
- A104R
- Kingdom:
- euk
Quality
73.2
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Asfuvirales›
Asfarviridae›
Asfivirus›
African_swine_fever_virus
TaxID: 10497
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 11-103
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00216.27 best | Bac_DNA_binding | 58.2 | 1.10e-15 | 100.0% | 94.4% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4f9cA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.58 | 46.0 | 3.63e-01 | 86.0% | 91.8% |
| 6lmjB00 | 4.10.520.10 | Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins | 0.54 | 45.0 | 4.41e-01 | 100.0% | 82.7% |
| 4pt4B00 | 4.10.520.10 | Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins | 0.53 | 44.0 | 4.34e-01 | 87.1% | 91.8% |
| 2iieA01 | 4.10.520.10 | Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins | 0.51 | 41.0 | 3.91e-01 | 84.9% | 88.0% |
| 1s7iA00 | 3.30.70.1060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel | 0.50 | 35.0 | 3.28e-01 | 84.9% | 55.6% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4508411 | 101.17.1.1 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding | 0.55 | 45.0 | 4.42e-01 | 86.0% | 91.0% |
| 2627940 | 101.17.1.1 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding | 0.54 | 45.0 | 4.44e-01 | 100.0% | 81.8% |
| 3964061 | 101.17.1.1 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding | 0.54 | 43.0 | 4.12e-01 | 82.8% | 94.2% |
| 3907533 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.53 | 21.0 | 2.90e-01 | 94.6% | 75.0% |
| 4227571 | 101.17.1.1 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding | 0.52 | 42.0 | 4.17e-01 | 86.0% | 92.0% |
| 4274974 | 101.17.1.1 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding | 0.52 | 41.0 | 4.06e-01 | 84.9% | 94.0% |
| 4681823 | 101.17.1.1 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding | 0.51 | 41.0 | 4.02e-01 | 83.9% | 91.0% |
| 3273486 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.51 | 28.0 | 2.45e-01 | 73.1% | 35.2% |
| 3249050 | 3203.1.1.1 ↗ | a+b two layers › Putative oxidoreductase › Putative oxidoreductase › Putative oxidoreductase › NDUS4 | 0.50 | 28.0 | 2.74e-01 | 89.2% | 44.5% |