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A3
Euk-VirAlcelaphine_gammaherpesvirus_2
A3__YP_009044389__Alcelaphine_gammaherpesvirus_2__138184
Identity
- Accession:
- YP_009044389 ↗
- Protein ID:
- A3
- Kingdom:
- euk
Quality
79.8
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Macavirus›
Alcelaphine_gammaherpesvirus_2
TaxID: 138184
Cluster
View cluster (10 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 523-605
Domain cluster:
rep: CR1-beta__YP_009174206__Simian_adenovirus_19__38416__D15-120
D2
medium
residues 40-152
Domain cluster:
rep: hypothetical_protein_CKM52_gp156__YP_009408338__Murmansk_poxvirus__2025359__D19-119
D3
medium
residues 153-379
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01403.26 best | Sema | 66.9 | 3.20e-18 | 44.0% | 58.8% |
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3nvqA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.97 | 95.0 | 7.23e-01 | 100.0% | 50.8% |
| 3nvnA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.94 | 86.0 | 6.95e-01 | 100.0% | 55.6% |
| 1q47A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.91 | 89.0 | 6.63e-01 | 100.0% | 51.2% |
| 1olzA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.91 | 89.0 | 6.66e-01 | 100.0% | 52.2% |
| 3afcA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.88 | 86.0 | 6.41e-01 | 100.0% | 50.2% |
| 6qp7A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.86 | 84.0 | 6.30e-01 | 100.0% | 51.0% |
| 6qp9B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.85 | 83.0 | 6.31e-01 | 100.0% | 50.1% |
| 8gq6A01 | 2.120.10.80 | Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller | 0.70 | 43.0 | 3.92e-01 | 100.0% | 46.1% |
| 4pj2A00 | 2.40.128.460 | Mainly Beta › Beta Barrel › Lipocalin › Periplasmic lysozyme inhibitor of I-type lysozyme | 0.66 | 34.0 | 4.59e-01 | 81.1% | 92.6% |
| 8aa0E01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.66 | 50.0 | 4.49e-01 | 100.0% | 57.5% |
| 7fisA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.62 | 43.0 | 3.91e-01 | 100.0% | 52.5% |
| 2vqeE01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.61 | 18.0 | 3.52e-01 | 75.3% | 93.8% |
| 3n8bA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 20.0 | 3.43e-01 | 96.0% | 88.0% |
| 3fhwA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 22.0 | 3.30e-01 | 77.5% | 81.8% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 140627 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.97 | 95.0 | 7.23e-01 | 100.0% | 50.9% |
| 3898586 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.94 | 92.0 | 7.01e-01 | 100.0% | 50.6% |
| 140636 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.94 | 87.0 | 7.04e-01 | 100.0% | 56.5% |
| 3904275 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.92 | 89.0 | 6.69e-01 | 100.0% | 52.7% |
| 3918968 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.92 | 82.0 | 7.03e-01 | 100.0% | 63.7% |
| 3768939 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.91 | 89.0 | 6.50e-01 | 100.0% | 48.0% |
| 4368436 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.91 | 67.0 | 5.96e-01 | 74.4% | 64.1% |
| 3530641 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.90 | 88.0 | 6.41e-01 | 100.0% | 47.4% |
| 3897197 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.89 | 87.0 | 6.42e-01 | 100.0% | 53.5% |
| 3903857 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.89 | 86.0 | 6.61e-01 | 100.0% | 50.9% |
| 3507674 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.89 | 86.0 | 6.42e-01 | 100.0% | 51.8% |
| 1390238 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.88 | 85.0 | 6.34e-01 | 100.0% | 48.8% |
| 3215406 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.88 | 85.0 | 6.41e-01 | 100.0% | 50.7% |
| 2447618 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.87 | 63.0 | 5.78e-01 | 90.7% | 58.8% |
| 3915628 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.87 | 85.0 | 6.48e-01 | 100.0% | 51.6% |
| 3573649 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.86 | 84.0 | 6.13e-01 | 100.0% | 50.7% |
| 3511660 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.86 | 84.0 | 6.18e-01 | 100.0% | 47.7% |
| 3941239 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.86 | 83.0 | 6.17e-01 | 100.0% | 47.4% |
| 3392483 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.84 | 81.0 | 6.07e-01 | 100.0% | 46.6% |
| 3495848 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.83 | 80.0 | 5.98e-01 | 100.0% | 49.9% |
| 3238592 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.82 | 75.0 | 5.79e-01 | 100.0% | 48.7% |
| 3478270 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.81 | 79.0 | 5.79e-01 | 100.0% | 48.7% |
| 3484308 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.80 | 78.0 | 5.90e-01 | 100.0% | 49.2% |
| 4001109 | 5.1.4.55 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ELYS-bb | 0.66 | 52.0 | 3.96e-01 | 100.0% | 36.6% |
| 3938391 | 5.1.4.16 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A | 0.65 | 48.0 | 4.16e-01 | 100.0% | 51.2% |
| 3487833 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.65 | 48.0 | 3.99e-01 | 100.0% | 44.7% |
| 3811535 | 331.3.1.28 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF220 | 0.62 | 24.0 | 3.23e-01 | 89.9% | 62.4% |
| 3212364 | 5.1.5.27 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › APEH_N | 0.62 | 50.0 | 3.91e-01 | 100.0% | 42.0% |
| 3514599 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.61 | 50.0 | 3.97e-01 | 100.0% | 43.9% |
| 3709267 | 5.1.2.33 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › BNR_3 | 0.61 | 51.0 | 4.38e-01 | 100.0% | 57.9% |
| 3715923 | 5.1.3.28 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 | 0.60 | 49.0 | 4.00e-01 | 100.0% | 46.2% |
| 3679520 | 708.1.1.1 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › NAM | 0.58 | 24.0 | 2.94e-01 | 82.4% | 56.7% |
| 3496336 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.58 | 52.0 | 4.02e-01 | 100.0% | 46.0% |
| 3644563 | 5.1.4.37 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 | 0.57 | 47.0 | 3.44e-01 | 100.0% | 35.0% |
| 3596021 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 51.0 | 4.11e-01 | 100.0% | 59.8% |
| 4878112 | 3274.1.1.1 ↗ | extended segments › N-terminal region in 40S ribosomal protein rpS2 (S5p) › N-terminal region in 40S ribosomal protein rpS2 (S5p) › N-terminal region in 40S ribosomal protein rpS2 (S5p) › Ribosomal_S5 | 0.54 | 22.0 | 3.18e-01 | 72.7% | 80.6% |
| 3675696 | 5.1.4.288 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › APEH_N | 0.53 | 50.0 | 3.85e-01 | 100.0% | 53.5% |
| 3437556 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.53 | 29.0 | 3.17e-01 | 90.7% | 60.5% |
| 4937992 | 330.1.1.2 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Ribosomal_S5 | 0.52 | 18.0 | 3.00e-01 | 100.0% | 85.0% |
| 3429464 | 10.1.1.2 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB | 0.51 | 33.0 | 3.88e-01 | 84.1% | 93.0% |
| 4289288 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.50 | 23.0 | 3.06e-01 | 86.3% | 75.8% |
| 3701742 | 5.1.4.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,CAF1C_H4-bd | 0.50 | 47.0 | 3.63e-01 | 100.0% | 48.4% |
D4
medium
residues 467-512