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AAA_family_ATPase

Euk-Vir

Acanthamoeba_polyphaga_moumouvirus

AAA_family_ATPase__YP_007354307__Acanthamoeba_polyphaga_moumouvirus__1269028

Identity

Accession:
YP_007354307 ↗
Protein ID:
AAA_family_ATPase
Kingdom:
euk

Quality

71.2 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Imitervirales› Mimiviridae› Moumouvirus› Acanthamoeba_polyphaga_moumouvirus

TaxID: 1269028

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 36-104
PDB
D2 high residues 114-195
PDB
Domain cluster: rep: IMGVR_UViG_3300001073_000001-3300001073-C687J13245_10000113__D94-163
D3 high residues 196-302
PDB
Domain cluster: rep: putative_AAA_family_ATPase__YP_003986983__Acanthamoeba_polyphaga_mimivirus__212035__D219-322
D4 high residues 305-395
PDB
Domain cluster: rep: IMGVR_UViG_3300001073_000001-3300001073-C687J13245_10000113__D94-163
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wlfA02 3.10.330.10 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.83 69.0 7.40e-01 90.1% 100.0%
1qcsA02 3.10.330.10 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.82 76.0 7.19e-01 98.9% 99.0%
2jv2A00 3.10.330.10 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.80 61.0 6.58e-01 89.0% 94.7%
1cr5B02 3.10.330.10 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.80 67.0 6.64e-01 87.9% 98.9%
1zc1A02 3.10.330.10 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.80 64.0 6.92e-01 86.8% 100.0%
2pjhB02 3.10.330.10 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.77 65.0 6.18e-01 94.5% 78.3%
2nwuB01 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.56 41.0 3.70e-01 76.9% 92.9%
3d7aA01 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.54 39.0 3.50e-01 76.9% 91.9%
2nrqA00 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.53 37.0 3.31e-01 73.6% 94.2%
6oqrA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.52 30.0 3.04e-01 75.8% 55.6%
3gqbA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.51 31.0 3.45e-01 72.5% 77.5%
2w2sA00 3.10.460.20 Alpha Beta › Roll › VSV matrix protein › Rhabdovirus matrix protein M2 0.50 38.0 3.22e-01 82.4% 85.9%
ECOD (69)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3594625 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.88 82.0 7.80e-01 100.0% 96.2%
3784922 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.87 81.0 7.51e-01 98.9% 98.2%
3715863 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.86 81.0 8.01e-01 100.0% 98.9%
3652467 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.86 80.0 7.47e-01 100.0% 90.9%
3257012 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.86 79.0 7.80e-01 97.8% 100.0%
4027678 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.85 80.0 7.48e-01 100.0% 89.1%
4982744 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.85 67.0 7.34e-01 94.5% 100.0%
4967959 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.85 66.0 7.26e-01 90.1% 98.7%
3167285 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.85 78.0 7.23e-01 97.8% 98.2%
3743745 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.85 79.0 7.35e-01 100.0% 98.2%
5053175 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.85 72.0 7.50e-01 90.1% 98.8%
3615553 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.84 75.0 6.72e-01 93.4% 88.3%
4991007 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.84 65.0 7.21e-01 87.9% 100.0%
3646144 229.1.1.3 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › PEX-1N 0.84 72.0 6.95e-01 90.1% 100.0%
4994054 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.84 69.0 7.39e-01 94.5% 98.8%
3180800 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.84 76.0 7.06e-01 96.7% 99.1%
3685006 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.83 77.0 6.92e-01 98.9% 100.0%
5078755 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.83 65.0 7.14e-01 93.4% 100.0%
4021343 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.83 69.0 7.37e-01 90.1% 100.0%
3598454 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.83 72.0 6.80e-01 91.2% 100.0%
4998502 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.83 65.0 7.12e-01 92.3% 100.0%
5050555 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.83 64.0 7.05e-01 90.1% 98.7%
3492327 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.83 77.0 7.33e-01 100.0% 96.2%
3884492 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.83 77.0 7.06e-01 100.0% 96.5%
5053342 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.82 65.0 7.07e-01 92.3% 100.0%
3406946 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.82 71.0 6.89e-01 92.3% 97.0%
3932685 229.1.1.3 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › PEX-1N 0.82 69.0 7.19e-01 89.0% 97.6%
4991440 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.82 60.0 6.75e-01 95.6% 100.0%
3516179 229.1.1.8 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › UFD1_N2 0.82 70.0 7.27e-01 95.6% 97.6%
4927348 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.82 64.0 7.03e-01 90.1% 100.0%
4991500 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.82 66.0 6.84e-01 92.3% 90.6%
4978260 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.82 66.0 7.05e-01 94.5% 97.5%
4928877 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.82 66.0 6.83e-01 92.3% 91.8%
3862274 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.81 67.0 6.79e-01 89.0% 87.8%
4928939 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.81 66.0 6.88e-01 94.5% 91.8%
5045003 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.81 67.0 6.93e-01 87.9% 97.6%
4940825 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.81 65.0 6.77e-01 94.5% 90.6%
3727538 229.1.1.8 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › UFD1_N2 0.81 66.0 7.02e-01 92.3% 98.8%
3481990 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.81 67.0 7.12e-01 90.1% 98.8%
4029158 229.1.1.8 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › UFD1_N2 0.80 67.0 7.20e-01 87.9% 100.0%
165655 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.80 61.0 6.58e-01 89.0% 94.7%
3486352 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.80 68.0 6.88e-01 94.5% 91.1%
3596666 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.80 67.0 6.79e-01 92.3% 90.0%
5042185 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.80 65.0 6.91e-01 94.5% 97.5%
5079578 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.80 70.0 7.12e-01 94.5% 98.9%
3729985 229.1.1.3 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › PEX-1N 0.80 70.0 6.76e-01 93.4% 99.0%
4943792 229.1.1.12 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › AAA 0.80 65.0 6.71e-01 94.5% 91.8%
3669540 229.1.1.8 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › UFD1_N2 0.80 66.0 6.96e-01 94.5% 100.0%
5057265 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.79 66.0 6.95e-01 94.5% 100.0%
5045457 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.79 63.0 6.53e-01 92.3% 89.4%
3427277 229.1.1.8 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › UFD1_N2 0.79 67.0 6.93e-01 95.6% 96.5%
5045055 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.79 64.0 6.62e-01 94.5% 91.8%
3857417 1.1.2.42 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › PF29595 0.79 61.0 6.68e-01 92.3% 98.7%
4024751 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.78 69.0 6.82e-01 93.4% 92.6%
3993833 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.78 65.0 6.74e-01 87.9% 100.0%
3605375 229.1.1.8 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › UFD1_N2 0.78 69.0 7.02e-01 94.5% 100.0%
3597195 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.78 69.0 7.02e-01 94.5% 100.0%
3762054 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.78 67.0 6.80e-01 93.4% 93.3%
3636770 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.77 65.0 6.25e-01 91.2% 88.6%
4413380 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.75 66.0 6.53e-01 96.7% 90.5%
3412949 101.1.2.651 ↗ alpha arrays › HTH › HTH › winged helix domain › PF29595 0.75 62.0 6.59e-01 97.8% 100.0%
5026962 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.75 61.0 6.48e-01 93.4% 98.8%
3921387 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.75 65.0 6.32e-01 94.5% 96.0%
4970085 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.73 63.0 6.40e-01 95.6% 95.6%
4601870 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.72 63.0 6.24e-01 94.5% 91.6%
3211711 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.72 64.0 6.22e-01 95.6% 92.0%
3709520 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.61 42.0 3.69e-01 71.4% 100.0%
3706456 304.55.2.8 ↗ a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like › FAZ1_cons 0.51 31.0 3.21e-01 95.6% 61.1%
3493241 323.1.1.0 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.50 34.0 2.82e-01 70.3% 42.9%
D5 high residues 408-504
PDB
D6 high residues 515-698
PDB
D7 high residues 709-793
PDB
Domain cluster: rep: IMGVR_UViG_3300010350_000704-3300010350-Ga0116244_1000871117__D15-101
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF17862.8 best AAA_lid_3 35.4 8.60e-09 68.2% 88.9%
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5ubvA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.95 72.0 7.87e-01 94.1% 93.0%
3whkA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.95 70.0 7.66e-01 92.9% 90.3%
4a3vB01 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.94 71.0 7.69e-01 94.1% 91.7%
2dznF00 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.86 65.0 7.23e-01 94.1% 97.1%
3d8bB02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.85 72.0 7.36e-01 91.8% 91.5%
4d81A02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.84 71.0 6.85e-01 97.6% 80.9%
1xwiA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.80 72.0 6.28e-01 96.5% 94.3%
6p10B02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.78 70.0 6.88e-01 97.6% 90.1%
7swlB02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.76 72.0 6.71e-01 100.0% 95.1%
6b5cA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.75 63.0 6.37e-01 89.4% 91.9%
3uk6A02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.73 58.0 5.85e-01 100.0% 86.7%
2c9oB03 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.72 56.0 5.68e-01 100.0% 86.7%
3sykA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.71 61.0 5.99e-01 94.1% 94.4%
1l6nA02 1.10.375.10 Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein 0.69 53.0 4.62e-01 82.4% 76.3%
1sxjD02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.69 50.0 5.34e-01 92.9% 92.9%
4akgA08 1.10.472.130 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Dynein motor, AAA2 domain, small subdomain 0.66 59.0 4.83e-01 100.0% 71.8%
3umbA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.65 47.0 4.92e-01 98.8% 81.0%
1c9bA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.61 42.0 4.03e-01 83.5% 61.9%
2no4A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.60 41.0 4.36e-01 88.2% 80.0%
3b9wA00 1.10.3430.10 Mainly Alpha › Orthogonal Bundle › Ammonium transporter fold › Ammonium transporter AmtB like domains 0.59 52.0 3.45e-01 100.0% 83.7%
3qybA03 1.10.472.80 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Ypt/Rab-GAP domain of gyp1p, domain 3 0.58 49.0 4.33e-01 96.5% 97.0%
1u7kA00 1.10.375.10 Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein 0.57 42.0 3.65e-01 77.6% 61.8%
1b5lA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.57 43.0 3.58e-01 81.2% 94.1%
1sg7A00 1.10.1740.70 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › ChaB 0.57 45.0 4.72e-01 97.6% 98.7%
2xguB00 1.10.375.10 Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein 0.56 42.0 3.67e-01 82.4% 64.9%
3hzjA03 1.10.472.80 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Ypt/Rab-GAP domain of gyp1p, domain 3 0.55 45.0 3.86e-01 92.9% 87.2%
2xgvA00 1.10.375.10 Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein 0.55 49.0 4.20e-01 97.6% 83.5%
4g12A02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.54 42.0 3.55e-01 84.7% 91.3%
3ez0C00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.54 48.0 3.65e-01 100.0% 90.9%
1u61A00 1.10.1520.10 Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain 0.53 41.0 3.65e-01 84.7% 94.5%
2b5dX01 3.20.110.10 Alpha Beta › Alpha-Beta Barrel › 7-stranded beta/alpha barrel › Glycoside hydrolase 38, N terminal domain 0.53 40.0 2.59e-01 80.0% 77.5%
3emlA01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.53 45.0 3.15e-01 95.3% 52.1%
1kg2A02 1.10.340.30 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 0.53 36.0 3.36e-01 94.1% 54.5%
3pivA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.52 43.0 3.55e-01 90.6% 70.5%
3m9vA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.52 39.0 3.23e-01 80.0% 79.6%
4hl4A02 1.10.472.80 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Ypt/Rab-GAP domain of gyp1p, domain 3 0.52 45.0 3.96e-01 100.0% 97.8%
1ornA01 1.10.340.30 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 0.51 34.0 3.20e-01 94.1% 52.7%
3bg2A02 1.10.3550.10 Mainly Alpha › Orthogonal Bundle › eoxyguanosinetriphosphate triphosphohydrolase fold › eoxyguanosinetriphosphate triphosphohydrolase domain-like 0.51 44.0 4.06e-01 98.8% 99.1%
3pm0A00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.51 45.0 2.85e-01 100.0% 46.2%
2pybA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.50 38.0 3.24e-01 82.4% 85.4%
ECOD (85)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3600972 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.94 76.0 7.62e-01 100.0% 83.5%
3838010 148.1.3.19 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.94 69.0 7.64e-01 95.3% 92.9%
3610034 148.1.3.19 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.94 76.0 7.45e-01 100.0% 79.8%
3286978 148.1.3.19 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.93 74.0 7.66e-01 96.5% 87.5%
4995972 148.1.3.19 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.93 84.0 8.01e-01 100.0% 84.2%
4003864 148.1.3.19 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.91 84.0 7.53e-01 100.0% 74.5%
3725963 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.91 83.0 7.81e-01 96.5% 91.0%
3214493 2004.1.1.530 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, AAA_lid_3 0.90 82.0 5.22e-01 100.0% 23.9%
3942496 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.90 68.0 7.22e-01 96.5% 88.0%
3630738 148.1.3.19 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.90 70.0 6.90e-01 96.5% 76.7%
3187879 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.90 83.0 7.15e-01 97.6% 94.4%
3605778 148.1.3.19 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.90 85.0 7.61e-01 98.8% 90.9%
4057642 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.90 83.0 7.03e-01 97.6% 92.3%
3598193 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.90 85.0 7.83e-01 100.0% 82.9%
5057269 148.1.3.19 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.89 70.0 6.86e-01 97.6% 76.7%
3626717 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.89 82.0 7.85e-01 100.0% 86.3%
3391392 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.88 72.0 7.42e-01 98.8% 90.0%
3552234 148.1.3.19 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.88 84.0 8.00e-01 100.0% 88.4%
4940334 148.1.3.19 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.87 73.0 6.47e-01 100.0% 64.3%
3915070 148.1.3.19 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.87 83.0 7.37e-01 100.0% 84.3%
5053346 148.1.3.19 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.87 83.0 7.75e-01 100.0% 86.0%
4929619 148.1.3.19 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.87 82.0 7.86e-01 98.8% 89.5%
4927627 148.1.3.19 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.87 83.0 7.61e-01 100.0% 81.9%
4143372 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.87 80.0 7.24e-01 97.6% 90.9%
3717926 148.1.3.19 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.86 79.0 7.61e-01 96.5% 89.5%
3173999 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.86 81.0 7.63e-01 100.0% 95.0%
3826289 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.85 76.0 6.89e-01 100.0% 72.7%
3401113 148.1.3.19 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.85 75.0 7.00e-01 91.8% 95.0%
3511643 148.1.3.19 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.85 74.0 7.50e-01 97.6% 92.9%
3560929 148.1.3.19 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.84 78.0 7.30e-01 97.6% 91.0%
3594627 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.84 78.0 7.43e-01 97.6% 91.6%
4026359 148.1.3.19 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.84 74.0 7.27e-01 91.8% 93.3%
3888410 148.1.3.19 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.83 73.0 7.38e-01 96.5% 92.9%
3249340 148.1.3.19 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.83 65.0 6.94e-01 90.6% 93.3%
4027608 148.1.3.19 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.82 76.0 7.01e-01 97.6% 91.4%
5078742 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.82 78.0 4.92e-01 100.0% 22.6%
4975128 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.82 76.0 6.85e-01 97.6% 75.5%
4013393 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.82 76.0 7.41e-01 96.5% 92.2%
4375372 148.1.3.19 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.82 75.0 6.75e-01 96.5% 81.8%
5066569 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.82 77.0 4.57e-01 100.0% 16.3%
4030144 148.1.3.19 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.82 75.0 6.89e-01 96.5% 93.3%
4967305 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.81 76.0 7.19e-01 100.0% 88.0%
3740396 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.81 75.0 7.09e-01 100.0% 84.0%
3596668 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.81 76.0 6.16e-01 100.0% 57.3%
3800487 148.1.3.19 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.81 77.0 6.61e-01 100.0% 92.0%
3772226 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.81 74.0 7.24e-01 96.5% 91.1%
3616017 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.81 77.0 7.37e-01 100.0% 93.7%
3520147 148.1.3.19 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.81 77.0 6.68e-01 100.0% 76.7%
4967913 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.81 60.0 6.05e-01 100.0% 77.6%
3184457 148.1.3.19 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.81 75.0 7.16e-01 97.6% 90.5%
3651815 148.1.3.19 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.81 75.0 6.51e-01 100.0% 93.6%
3627365 148.1.3.19 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.80 76.0 6.83e-01 100.0% 76.4%
3186324 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.80 75.0 6.68e-01 100.0% 92.2%
5017387 148.1.3.19 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.80 73.0 5.95e-01 96.5% 95.9%
5068456 148.1.3.19 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.79 75.0 6.89e-01 100.0% 83.8%
3272955 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.79 73.0 7.04e-01 100.0% 92.6%
3743727 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.79 66.0 6.69e-01 100.0% 90.6%
4238496 148.1.3.23 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_6 0.79 70.0 6.50e-01 96.5% 92.4%
3833919 148.1.3.19 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.79 72.0 6.53e-01 97.6% 85.5%
3620740 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.79 71.0 6.86e-01 97.6% 90.5%
None — 0.79 74.0 5.06e-01 100.0% 32.8%
3358884 148.1.3.19 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.79 73.0 6.97e-01 97.6% 89.5%
3343850 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.78 70.0 6.88e-01 100.0% 91.1%
3311758 148.1.3.19 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.78 71.0 6.95e-01 97.6% 93.3%
3787051 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.77 69.0 6.76e-01 97.6% 90.0%
3414086 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.76 67.0 6.61e-01 96.5% 90.0%
3914186 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.76 66.0 6.48e-01 96.5% 86.7%
3929822 148.1.3.6 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Vps4_C,AAA_lid_3 0.76 68.0 6.40e-01 96.5% 81.0%
3540946 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.75 71.0 4.13e-01 100.0% 13.5%
3541514 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.73 67.0 6.63e-01 100.0% 93.3%
3350039 148.1.3.19 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.72 67.0 6.41e-01 100.0% 92.6%
3924344 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.67 53.0 5.52e-01 95.3% 90.0%
3715668 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.62 51.0 4.15e-01 89.4% 63.7%
3251476 3470.1.1.0 ↗ extended segments › Glycophorin-A transmembrane domain › Glycophorin-A transmembrane domain › Glycophorin-A transmembrane domain 0.62 44.0 4.62e-01 74.1% 90.4%
3602815 524.1.1.0 ↗ alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p 0.62 52.0 4.40e-01 97.6% 69.0%
3390055 524.1.1.0 ↗ alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p 0.60 50.0 4.45e-01 91.8% 64.8%
3486111 5050.1.1.9 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.60 45.0 3.35e-01 80.0% 51.1%
5046197 5076.2.1.0 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ 0.60 52.0 3.56e-01 95.3% 39.2%
3568603 11.1.1.812 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TM7S3_TM198 0.58 45.0 3.29e-01 92.9% 30.2%
4025456 524.1.1.1 ↗ alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p › RabGAP-TBC 0.57 48.0 4.32e-01 96.5% 66.4%
3527142 524.1.1.3 ↗ alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p › RabGap-TBC_2 0.56 45.0 3.86e-01 92.9% 75.5%
3815745 592.6.1.1 ↗ alpha arrays › PWI domain-like › Pre-mRNA-splicing helicase BRR2 plug domain › Pre-mRNA-splicing helicase BRR2 plug domain › BRR2_plug 0.54 37.0 3.80e-01 87.1% 75.0%
389222 3229.1.1.1 ↗ alpha bundles › N-terminal domain in adenosine monophosphate-protein transferase vopS › N-terminal domain in adenosine monophosphate-protein transferase vopS › N-terminal domain in adenosine monophosphate-protein transferase vopS › VopS_N 0.53 42.0 3.64e-01 89.4% 80.1%
3621508 5050.1.1.31 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › SLC52_ribofla_tr 0.53 41.0 3.31e-01 87.1% 63.3%
4946451 102.1.1.182 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › Rad51 0.52 33.0 3.62e-01 78.8% 77.1%