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AB012111.1__BAA75078.1__X__00005

Bact-Vir

AB012111.1__BAA75078.1__X__00005

Identity

Accession:
AB012111 ↗
Kingdom:
phage

Quality

88.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 18-89
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01742.24 best Peptidase_M27 40.5 2.40e-10 100.0% 17.5%
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3v0aB01 3.90.1240.10 Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" 0.78 71.0 4.30e-01 100.0% 15.7%
8bypX01 3.90.1240.10 Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" 0.77 71.0 4.32e-01 100.0% 20.2%
2re3A02 2.30.270.10 Mainly Beta › Roll › duf1285 protein fold › duf1285 protein 0.69 35.0 3.57e-01 80.6% 48.6%
3mlqH00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.59 34.0 4.01e-01 95.8% 95.2%
4ep4A00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.58 43.0 3.19e-01 100.0% 33.1%
2v3sA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.53 31.0 2.82e-01 75.0% 41.7%
3kxyT00 6.20.290.10 Special › Other non-globular › Dna Ligase; domain 1 › 0.53 27.0 2.85e-01 86.1% 52.3%
4hlnA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.51 45.0 3.25e-01 100.0% 72.0%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3905302 284.1.3.8 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › Fy-3 0.60 35.0 3.34e-01 75.0% 49.4%
3961074 6032.1.1.0 a+b two layers › DUF3222-like › DUF3222-like › DUF3222-like 0.58 38.0 3.47e-01 70.8% 49.0%
4028555 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.58 39.0 3.93e-01 98.6% 68.0%
5037381 375.1.1.19 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD 0.54 25.0 2.91e-01 76.4% 58.0%
3414351 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.54 39.0 3.03e-01 79.2% 75.4%
3259141 284.1.3.0 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.53 30.0 3.25e-01 80.6% 66.7%
3983402 4312.1.1.4 a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 0.53 43.0 4.50e-01 97.2% 100.0%