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AB366653.2__BAG41454.1__X__00009

Bact-Vir

AB366653.2__BAG41454.1__X__00009

Identity

Accession:
AB366653 ↗
Kingdom:
phage

Quality

84.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Mieseafarmvirus› Ralstonia_phage_phiRSL1

TaxID: 1980924

Cluster

View cluster (51 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-92
PDB
Domain cluster: rep: IMGVR_UViG_3300032006_002050-3300032006-Ga0310344_100038483__D2-86
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3by7E00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.91 74.0 8.03e-01 97.8% 98.7%
2vc8A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.82 52.0 5.78e-01 86.5% 80.6%
4c92A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.80 62.0 5.33e-01 93.3% 55.4%
4c92B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.76 51.0 4.84e-01 86.5% 58.1%
6v4xC01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.76 49.0 4.73e-01 86.5% 59.0%
1y96A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.75 47.0 4.78e-01 91.0% 65.1%
1d3bB00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.68 52.0 5.47e-01 95.5% 88.9%
2fb7A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 46.0 4.84e-01 85.4% 85.0%
1kf6A04 4.10.80.40 Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › succinate dehydrogenase protein domain 0.61 26.0 3.78e-01 70.8% 97.1%
3jscA00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.58 51.0 5.01e-01 100.0% 91.7%
4jglA00 2.40.128.530 Mainly Beta › Beta Barrel › Lipocalin › 0.54 46.0 3.97e-01 100.0% 77.6%
3be3A00 2.30.30.320 Mainly Beta › Roll › SH3 type barrels. › DUF1653-like domain 0.52 38.0 4.10e-01 89.9% 92.1%
2f96A00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.51 41.0 3.23e-01 89.9% 87.6%
2y1sA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.51 33.0 3.10e-01 70.8% 53.7%
5w8mA00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.51 34.0 2.69e-01 70.8% 96.9%
3pg4A00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.50 36.0 2.70e-01 75.3% 89.6%
ECOD (57)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3586008 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.91 58.0 6.56e-01 87.6% 82.9%
3616088 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.90 57.0 6.48e-01 87.6% 82.9%
4813032 4.1.1.328 ↗ beta barrels › SH3 › SH3 › SH3 › Sm_like 0.89 73.0 7.76e-01 100.0% 96.2%
3227009 4.1.1.71 ↗ beta barrels › SH3 › SH3 › SH3 › Gemin7 0.89 51.0 5.62e-01 83.1% 69.3%
3928928 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.88 55.0 6.03e-01 86.5% 76.0%
3793196 4.1.1.71 ↗ beta barrels › SH3 › SH3 › SH3 › Gemin7 0.86 52.0 5.25e-01 86.5% 61.1%
3936053 4.1.1.71 ↗ beta barrels › SH3 › SH3 › SH3 › Gemin7 0.86 52.0 5.80e-01 85.4% 77.1%
4948178 4.1.1.484 ↗ beta barrels › SH3 › SH3 › SH3 › Lsm_C 0.86 52.0 5.86e-01 85.4% 78.6%
5011460 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.86 53.0 5.94e-01 86.5% 80.0%
3214326 4.1.1.81 ↗ beta barrels › SH3 › SH3 › SH3 › LSM14 0.85 53.0 5.93e-01 86.5% 80.0%
5037228 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.85 51.0 5.91e-01 84.3% 83.1%
3619686 4.1.1.71 ↗ beta barrels › SH3 › SH3 › SH3 › Gemin7 0.85 50.0 6.29e-01 84.3% 96.4%
4532859 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.84 52.0 6.29e-01 84.3% 93.3%
4971102 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.84 51.0 5.77e-01 85.4% 78.6%
4934755 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.84 53.0 5.95e-01 87.6% 81.4%
3740204 4.1.1.71 ↗ beta barrels › SH3 › SH3 › SH3 › Gemin7 0.83 52.0 5.31e-01 87.6% 65.9%
5042049 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.83 52.0 5.38e-01 87.6% 67.1%
4996021 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.83 53.0 5.58e-01 88.8% 72.5%
5026766 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.83 50.0 5.76e-01 85.4% 83.1%
3772638 4.1.1.71 ↗ beta barrels › SH3 › SH3 › SH3 › Gemin7 0.82 49.0 5.20e-01 85.4% 66.7%
5044296 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.82 58.0 6.18e-01 86.5% 83.3%
2701178 4.1.1.71 ↗ beta barrels › SH3 › SH3 › SH3 › Gemin7 0.82 49.0 5.02e-01 85.4% 62.1%
4013632 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 51.0 5.41e-01 85.4% 75.6%
3271407 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 54.0 5.60e-01 92.1% 75.3%
3832288 4.1.1.81 ↗ beta barrels › SH3 › SH3 › SH3 › LSM14 0.78 60.0 6.05e-01 87.6% 81.1%
3598657 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 50.0 4.85e-01 86.5% 60.0%
3712189 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.76 56.0 5.59e-01 91.0% 75.6%
4026408 4.1.1.219 ↗ beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.76 45.0 4.38e-01 86.5% 54.0%
3785079 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.74 60.0 5.01e-01 93.3% 52.4%
3626383 4.1.1.81 ↗ beta barrels › SH3 › SH3 › SH3 › LSM14 0.74 55.0 5.43e-01 86.5% 72.6%
3788565 4.1.1.89 ↗ beta barrels › SH3 › SH3 › SH3 › SM-ATX 0.73 51.0 5.15e-01 85.4% 72.2%
5032402 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 54.0 5.54e-01 87.6% 82.4%
3820621 4.1.1.81 ↗ beta barrels › SH3 › SH3 › SH3 › LSM14 0.72 54.0 5.67e-01 85.4% 86.3%
3786412 4.1.1.344 ↗ beta barrels › SH3 › SH3 › SH3 › PF31193 0.72 49.0 5.22e-01 87.6% 78.8%
3593948 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 55.0 5.67e-01 87.6% 84.7%
3819397 4.1.1.219 ↗ beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.71 45.0 4.75e-01 86.5% 71.2%
3699736 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 55.0 5.44e-01 85.4% 77.7%
3176686 4.1.1.81 ↗ beta barrels › SH3 › SH3 › SH3 › LSM14 0.70 58.0 5.98e-01 94.4% 91.8%
4976962 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 60.0 5.75e-01 93.3% 82.0%
3610074 4.1.1.81 ↗ beta barrels › SH3 › SH3 › SH3 › LSM14 0.68 55.0 5.10e-01 92.1% 69.1%
3368568 4.1.1.81 ↗ beta barrels › SH3 › SH3 › SH3 › LSM14 0.68 54.0 5.46e-01 92.1% 83.3%
3484138 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 55.0 5.36e-01 91.0% 84.7%
3825252 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 48.0 4.82e-01 91.0% 76.7%
5054141 2.14.1.0 ↗ beta barrels › OB-fold › HupF/HypC-like › HupF/HypC-like 0.63 30.0 3.89e-01 71.9% 80.0%
3669494 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.62 42.0 3.59e-01 89.9% 42.0%
3373583 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.61 41.0 4.48e-01 88.8% 87.1%
3702167 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 52.0 4.71e-01 91.0% 70.4%
3785900 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 42.0 2.70e-01 84.3% 31.9%
224086 9.18.1.0 ↗ beta barrels › Lipocalins/Streptavidin 0.54 46.0 3.97e-01 100.0% 77.6%
3244742 2484.1.1.200 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH 0.53 35.0 2.47e-01 94.4% 21.0%
4134015 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.53 42.0 3.57e-01 88.8% 72.3%
5078006 375.1.3.1 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF1922 0.52 30.0 3.34e-01 89.9% 71.4%
3800269 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.51 39.0 3.33e-01 82.0% 97.3%
None — 0.51 40.0 2.84e-01 84.3% 83.4%
3591211 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.50 36.0 3.79e-01 83.1% 85.0%
3565241 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.50 41.0 2.72e-01 91.0% 76.7%
3789132 4.1.1.146 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_uL24m-like 0.50 41.0 3.03e-01 91.0% 34.7%