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AB366653.2__BAG41544.1__X__00099
Bact-VirAB366653.2__BAG41544.1__X__00099
Identity
- Accession:
- AB366653 ↗
- Kingdom:
- phage
Quality
67.3
mean pLDDT
Taxonomy
TaxID: 1980924
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-84
D2
high
residues 97-149
Domain cluster:
representative
CATH (57)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wzoA01 | 2.30.30.370 | Mainly Beta › Roll › SH3 type barrels. › FAH | 0.83 | 59.0 | 6.50e-01 | 83.0% | 100.0% |
| 2eqjA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.76 | 64.0 | 5.92e-01 | 92.5% | 80.3% |
| 3askA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 62.0 | 5.90e-01 | 92.5% | 95.2% |
| 2digA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 62.0 | 5.73e-01 | 92.5% | 79.4% |
| 4b9wA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 58.0 | 5.76e-01 | 84.9% | 87.5% |
| 5ygbA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 67.0 | 5.82e-01 | 100.0% | 77.5% |
| 2zkmX01 | 2.30.29.240 | Mainly Beta › Roll › PH-domain like › | 0.75 | 59.0 | 3.93e-01 | 86.8% | 49.5% |
| 1mhnA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 63.0 | 6.07e-01 | 94.3% | 94.9% |
| 5kcoA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 60.0 | 5.82e-01 | 88.7% | 89.8% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 63.0 | 5.83e-01 | 98.1% | 78.3% |
| 3meuB02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 61.0 | 5.52e-01 | 94.3% | 93.2% |
| 4me8A00 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.73 | 59.0 | 4.59e-01 | 90.6% | 95.7% |
| 1khcA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 60.0 | 5.61e-01 | 92.5% | 90.8% |
| 2eqkA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 62.0 | 5.69e-01 | 100.0% | 79.5% |
| 7ctpA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.72 | 56.0 | 4.30e-01 | 84.9% | 81.7% |
| 2rm4A01 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 54.0 | 5.13e-01 | 84.9% | 95.5% |
| 3ntkA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 64.0 | 5.55e-01 | 100.0% | 66.3% |
| 1fgyA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.71 | 56.0 | 4.26e-01 | 86.8% | 77.0% |
| 4ffkA02 | 3.55.40.20 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain | 0.71 | 47.0 | 3.56e-01 | 84.9% | 29.3% |
| 1zq1A01 | 2.30.30.520 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 60.0 | 5.38e-01 | 98.1% | 83.1% |
| 1faoA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.71 | 56.0 | 4.53e-01 | 86.8% | 76.0% |
| 4ii1A02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 62.0 | 6.12e-01 | 100.0% | 100.0% |
| 2x4jA01 | 2.30.30.600 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 59.0 | 4.83e-01 | 100.0% | 66.7% |
| 1plsA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.68 | 53.0 | 4.21e-01 | 86.8% | 69.0% |
| 1eazA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.68 | 53.0 | 4.33e-01 | 86.8% | 76.7% |
| 2gfaB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 57.0 | 5.48e-01 | 100.0% | 91.9% |
| 4fgoA00 | 3.10.620.30 | Alpha Beta › Roll › C8orf32 fold › | 0.66 | 50.0 | 3.55e-01 | 86.8% | 29.8% |
| 2f5tX02 | 2.30.30.690 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 56.0 | 4.79e-01 | 100.0% | 88.9% |
| 2coaA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.64 | 49.0 | 3.90e-01 | 86.8% | 69.5% |
| 2greF02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.63 | 53.0 | 4.76e-01 | 98.1% | 100.0% |
| 1boqA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.63 | 47.0 | 3.89e-01 | 86.8% | 88.8% |
| 4a6fA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.63 | 47.0 | 3.91e-01 | 86.8% | 79.0% |
| 2k2jA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.62 | 47.0 | 3.76e-01 | 86.8% | 76.9% |
| 4iapA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.62 | 46.0 | 4.01e-01 | 86.8% | 79.3% |
| 1aw8B00 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.61 | 50.0 | 4.30e-01 | 96.2% | 64.8% |
| 1y71A00 | 2.30.30.430 | Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain | 0.61 | 47.0 | 3.87e-01 | 90.6% | 58.7% |
| 4mi7A00 | 3.90.70.170 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.60 | 48.0 | 3.90e-01 | 100.0% | 80.6% |
| 2fjlA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 44.0 | 3.32e-01 | 86.8% | 86.0% |
| 6tdyD01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.58 | 48.0 | 4.44e-01 | 100.0% | 96.0% |
| 2dpyA00 | 3.40.50.12240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 49.0 | 2.93e-01 | 100.0% | 16.4% |
| 2i1sA00 | 3.10.290.30 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › MM3350-like | 0.58 | 49.0 | 3.42e-01 | 96.2% | 48.9% |
| 1ukfA00 | 3.90.70.20 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.57 | 47.0 | 3.34e-01 | 100.0% | 46.8% |
| 1maiA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 43.0 | 3.47e-01 | 88.7% | 78.2% |
| 1cttA02 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.56 | 41.0 | 3.28e-01 | 81.1% | 45.2% |
| 3c8dB02 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 41.0 | 2.73e-01 | 81.1% | 37.8% |
| 2d7eA01 | 3.40.1440.60 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › PriA, 3(prime) DNA-binding domain | 0.56 | 45.0 | 3.85e-01 | 98.1% | 54.4% |
| 2kd2A01 | 2.40.128.180 | Mainly Beta › Beta Barrel › Lipocalin › | 0.55 | 42.0 | 3.67e-01 | 84.9% | 96.4% |
| 2bn4B03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.55 | 44.0 | 3.32e-01 | 100.0% | 87.3% |
| 1o5yA00 | 3.10.690.10 | Alpha Beta › Roll › Bifunctional nuclease domain › Bifunctional nuclease domain | 0.55 | 39.0 | 2.97e-01 | 79.2% | 97.9% |
| 4bd9B01 | 4.10.410.10 | Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain | 0.53 | 40.0 | 3.98e-01 | 98.1% | 79.6% |
| 1ri6A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 40.0 | 2.50e-01 | 84.9% | 22.8% |
| 6vtmB00 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.52 | 44.0 | 3.69e-01 | 98.1% | 94.8% |
| 4ntwB00 | 4.10.410.10 | Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain | 0.52 | 39.0 | 3.84e-01 | 98.1% | 74.6% |
| 2i51B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 37.0 | 2.67e-01 | 83.0% | 28.3% |
| 6q61A00 | 4.10.410.10 | Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain | 0.51 | 39.0 | 3.77e-01 | 98.1% | 72.9% |
| 1aalB00 | 4.10.410.10 | Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain | 0.51 | 38.0 | 3.72e-01 | 98.1% | 75.4% |
| 3holA03 | 2.40.128.240 | Mainly Beta › Beta Barrel › Lipocalin › | 0.50 | 38.0 | 3.30e-01 | 84.9% | 73.0% |
ECOD (84)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3673317 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.82 | 71.0 | 7.06e-01 | 92.5% | 98.2% |
| 3421158 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.81 | 66.0 | 6.36e-01 | 88.7% | 88.3% |
| 3372243 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 70.0 | 6.12e-01 | 100.0% | 82.5% |
| 3393347 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.77 | 70.0 | 5.81e-01 | 100.0% | 62.2% |
| 3368254 | 4.1.1.141 ↗ | beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor | 0.77 | 63.0 | 6.30e-01 | 90.6% | 98.2% |
| 3851361 | 4.1.1.78 ↗ | beta barrels › SH3 › SH3 › SH3 › TTD | 0.77 | 64.0 | 5.08e-01 | 92.5% | 71.4% |
| 3662854 | 4.1.1.187 ↗ | beta barrels › SH3 › SH3 › SH3 › DIRP | 0.76 | 69.0 | 4.79e-01 | 100.0% | 83.6% |
| 3881119 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.76 | 69.0 | 5.97e-01 | 100.0% | 66.3% |
| 3547084 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.76 | 69.0 | 5.72e-01 | 100.0% | 58.9% |
| 4105328 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.76 | 62.0 | 5.80e-01 | 90.6% | 81.5% |
| 3936496 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 66.0 | 5.40e-01 | 100.0% | 61.0% |
| 3515495 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 67.0 | 5.50e-01 | 100.0% | 60.0% |
| 3251940 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.75 | 63.0 | 5.60e-01 | 92.5% | 76.0% |
| 4018287 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.75 | 66.0 | 4.86e-01 | 100.0% | 58.3% |
| 3577224 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.75 | 66.0 | 5.55e-01 | 100.0% | 63.3% |
| 3940730 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 66.0 | 5.46e-01 | 100.0% | 65.3% |
| 3830187 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.75 | 62.0 | 6.16e-01 | 92.5% | 96.4% |
| 3535278 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 64.0 | 6.14e-01 | 94.3% | 91.7% |
| 3883165 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.75 | 68.0 | 5.43e-01 | 100.0% | 54.0% |
| 4007999 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.75 | 68.0 | 4.97e-01 | 100.0% | 43.0% |
| 3883159 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.75 | 67.0 | 5.58e-01 | 100.0% | 61.1% |
| 3294392 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.75 | 63.0 | 5.40e-01 | 94.3% | 62.4% |
| 3609629 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.75 | 67.0 | 5.51e-01 | 100.0% | 61.1% |
| 3547102 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.75 | 67.0 | 5.69e-01 | 100.0% | 67.1% |
| 3407821 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.75 | 67.0 | 5.70e-01 | 100.0% | 67.1% |
| 3298989 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 67.0 | 5.25e-01 | 100.0% | 57.3% |
| 3627842 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 65.0 | 5.51e-01 | 100.0% | 63.3% |
| 3926175 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 62.0 | 5.31e-01 | 92.5% | 65.9% |
| 3394215 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.74 | 67.0 | 5.39e-01 | 100.0% | 61.0% |
| 3330943 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.74 | 62.0 | 6.17e-01 | 94.3% | 98.2% |
| 3833030 | 4.1.1.187 ↗ | beta barrels › SH3 › SH3 › SH3 › DIRP | 0.74 | 66.0 | 4.89e-01 | 100.0% | 78.5% |
| 4002896 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.74 | 66.0 | 5.52e-01 | 100.0% | 58.9% |
| 3519597 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.74 | 65.0 | 5.37e-01 | 100.0% | 61.1% |
| 3255028 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.74 | 58.0 | 4.04e-01 | 86.8% | 52.4% |
| 3504834 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 60.0 | 5.91e-01 | 92.5% | 98.3% |
| 3570368 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.73 | 66.0 | 5.31e-01 | 100.0% | 58.0% |
| 3511337 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.73 | 65.0 | 5.47e-01 | 100.0% | 64.4% |
| 3688068 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.73 | 65.0 | 4.69e-01 | 100.0% | 40.7% |
| 3504519 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.73 | 65.0 | 4.86e-01 | 100.0% | 83.1% |
| 3630251 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.73 | 62.0 | 5.49e-01 | 100.0% | 86.3% |
| 4002985 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 60.0 | 5.83e-01 | 92.5% | 98.3% |
| 3429682 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 61.0 | 5.45e-01 | 94.3% | 70.7% |
| 3578590 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.73 | 61.0 | 5.35e-01 | 100.0% | 81.2% |
| 3547093 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.73 | 65.0 | 5.42e-01 | 100.0% | 61.1% |
| 3508319 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 59.0 | 5.54e-01 | 90.6% | 84.6% |
| 3492016 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.72 | 60.0 | 5.04e-01 | 92.5% | 60.0% |
| 3825252 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 60.0 | 5.07e-01 | 94.3% | 82.2% |
| 3913687 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.72 | 64.0 | 5.35e-01 | 100.0% | 60.0% |
| 3814411 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.72 | 63.0 | 5.08e-01 | 100.0% | 61.9% |
| 3617355 | 4.1.1.348 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor, SMN_YG-box | 0.72 | 64.0 | 5.24e-01 | 100.0% | 57.9% |
| 3913334 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 63.0 | 5.75e-01 | 100.0% | 78.6% |
| 3710893 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 63.0 | 4.72e-01 | 100.0% | 62.3% |
| 3407827 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.71 | 63.0 | 5.41e-01 | 100.0% | 63.5% |
| 3507338 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 61.0 | 5.90e-01 | 98.1% | 90.0% |
| 3999723 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 61.0 | 4.47e-01 | 100.0% | 36.7% |
| 3818428 | 4.1.1.66 ↗ | beta barrels › SH3 › SH3 › SH3 › LBR_tudor | 0.71 | 63.0 | 5.60e-01 | 100.0% | 82.7% |
| 3342430 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 63.0 | 5.63e-01 | 100.0% | 80.0% |
| 5053223 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 58.0 | 4.29e-01 | 92.5% | 42.8% |
| 2525277 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.71 | 60.0 | 5.90e-01 | 100.0% | 94.9% |
| 3517728 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.71 | 63.0 | 5.73e-01 | 100.0% | 77.1% |
| 3448975 | 4.1.1.66 ↗ | beta barrels › SH3 › SH3 › SH3 › LBR_tudor | 0.70 | 56.0 | 5.25e-01 | 88.7% | 92.3% |
| 3423337 | 4.1.1.141 ↗ | beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor | 0.70 | 62.0 | 5.43e-01 | 100.0% | 78.8% |
| 3926623 | 4184.1.1.0 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat | 0.70 | 59.0 | 5.43e-01 | 100.0% | 89.0% |
| 3792195 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 62.0 | 5.00e-01 | 100.0% | 63.0% |
| 3628119 | 4184.1.1.0 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat | 0.69 | 57.0 | 5.16e-01 | 100.0% | 87.5% |
| 3226400 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.69 | 58.0 | 5.01e-01 | 100.0% | 75.6% |
| 3934671 | 4184.1.1.0 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat | 0.69 | 57.0 | 5.02e-01 | 100.0% | 82.4% |
| 3905549 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.68 | 61.0 | 4.84e-01 | 100.0% | 59.0% |
| 3525406 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.68 | 60.0 | 4.75e-01 | 100.0% | 49.1% |
| 4420173 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.68 | 60.0 | 5.38e-01 | 100.0% | 76.0% |
| 3789912 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.68 | 57.0 | 4.98e-01 | 100.0% | 77.6% |
| 3255902 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 54.0 | 4.75e-01 | 90.6% | 71.2% |
| 3777243 | 220.1.1.161 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26659 | 0.67 | 52.0 | 3.89e-01 | 84.9% | 55.6% |
| 4936291 | 4.1.1.487 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7205 | 0.67 | 54.0 | 5.16e-01 | 96.2% | 86.2% |
| 3528403 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.66 | 51.0 | 3.58e-01 | 86.8% | 49.7% |
| 3974693 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.66 | 51.0 | 3.47e-01 | 86.8% | 26.3% |
| 3326132 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 53.0 | 5.08e-01 | 100.0% | 86.2% |
| 5010878 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.64 | 53.0 | 4.31e-01 | 100.0% | 81.7% |
| 4932189 | 4076.2.1.6 ↗ | a+b two layers › L9 N-domain-like › MbtH-like › MbtH-like › DUF1922 | 0.64 | 47.0 | 4.30e-01 | 83.0% | 60.0% |
| 4257969 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.63 | 54.0 | 4.15e-01 | 100.0% | 76.0% |
| 4636885 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.59 | 49.0 | 4.52e-01 | 100.0% | 96.0% |
| 3495619 | 220.1.1.22 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C | 0.58 | 43.0 | 3.57e-01 | 84.9% | 70.9% |
| 3960362 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.56 | 46.0 | 3.77e-01 | 100.0% | 47.8% |
| 3173787 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 41.0 | 3.40e-01 | 90.6% | 81.7% |
D3
high
residues 163-213
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3b0xA01 | 1.10.150.110 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DNA polymerase beta, N-terminal domain-like | 0.83 | 64.0 | 5.29e-01 | 82.4% | 72.4% |
| 3memA02 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.70 | 54.0 | 3.26e-01 | 82.4% | 18.4% |
| 4d3dB02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.69 | 48.0 | 3.62e-01 | 74.5% | 40.3% |
| 4gbjC02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.69 | 47.0 | 3.45e-01 | 72.5% | 36.3% |
| 5b1aC01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.66 | 45.0 | 4.05e-01 | 70.6% | 60.3% |
| 1ijyA00 | 1.10.2000.10 | Mainly Alpha › Orthogonal Bundle › Frizzled cysteine-rich domain › Frizzled cysteine-rich domain | 0.62 | 49.0 | 3.90e-01 | 96.1% | 51.6% |
| 4fjvA02 | 1.20.1300.20 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Peptidase C65 Otubain, subdomain 2 | 0.60 | 48.0 | 3.64e-01 | 96.1% | 70.1% |
| 1z82B02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.59 | 43.0 | 3.35e-01 | 86.3% | 49.3% |
| 1f9cA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.58 | 40.0 | 3.10e-01 | 72.5% | 96.7% |
| 4fcyA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.57 | 40.0 | 3.49e-01 | 72.5% | 47.4% |
| 2pmrA00 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.56 | 47.0 | 4.21e-01 | 100.0% | 97.4% |
| 3bm1A00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.55 | 45.0 | 3.13e-01 | 92.2% | 47.5% |
| 2fokA03 | 3.40.91.30 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.54 | 38.0 | 2.75e-01 | 78.4% | 96.6% |
| 1evyA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.54 | 43.0 | 3.32e-01 | 100.0% | 64.4% |
| 4ezbA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.53 | 41.0 | 3.28e-01 | 88.2% | 64.1% |
| 6w6jD01 | 1.10.1780.10 | Mainly Alpha › Orthogonal Bundle › Double Clp-N motif › Clp, N-terminal domain | 0.52 | 46.0 | 3.44e-01 | 100.0% | 78.6% |
| 3hwrA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.51 | 42.0 | 3.23e-01 | 96.1% | 51.2% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3406253 | 109.4.1.1213 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › IntS14_C | 0.85 | 64.0 | 4.87e-01 | 78.4% | 46.7% |
| 5023560 | 180.1.1.0 ↗ | alpha bundles › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase | 0.85 | 67.0 | 4.49e-01 | 84.3% | 36.8% |
| 5014744 | 150.1.1.3 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Rubrerythrin | 0.85 | 75.0 | 5.03e-01 | 96.1% | 76.6% |
| 5014742 | 150.1.1.3 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Rubrerythrin | 0.84 | 73.0 | 5.06e-01 | 94.1% | 84.5% |
| 4938272 | 601.7.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN | 0.80 | 64.0 | 4.65e-01 | 84.3% | 70.4% |
| 3293738 | 4246.1.1.2 ↗ | a+b complex topology › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_1 | 0.77 | 55.0 | 3.25e-01 | 74.5% | 12.5% |
| 3715120 | 3826.1.1.0 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) | 0.77 | 54.0 | 5.17e-01 | 74.5% | 78.3% |
| 3722045 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.77 | 63.0 | 4.36e-01 | 90.2% | 31.2% |
| 4236190 | 140.1.1.4 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1e,DALR_2 | 0.71 | 46.0 | 3.22e-01 | 70.6% | 20.0% |
| 2617496 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.70 | 51.0 | 3.37e-01 | 78.4% | 47.4% |
| 5038092 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.69 | 46.0 | 3.88e-01 | 70.6% | 41.2% |
| 3565896 | 3860.1.1.130 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm › Yae1_N | 0.67 | 56.0 | 4.11e-01 | 92.2% | 47.7% |
| 5040635 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.67 | 54.0 | 4.38e-01 | 100.0% | 68.7% |
| 3381499 | 314.1.1.1 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2 | 0.63 | 51.0 | 3.07e-01 | 94.1% | 44.4% |
| 4591251 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.63 | 54.0 | 4.57e-01 | 96.1% | 78.8% |
| 5082516 | 5069.1.1.4 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Ferric_reduct | 0.62 | 51.0 | 3.75e-01 | 96.1% | 62.0% |
| 4958517 | 316.1.1.43 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DUF294 | 0.61 | 50.0 | 3.41e-01 | 92.2% | 30.8% |
| 3175569 | 4307.1.1.0 ↗ | alpha duplicates or obligate multimers › EB1 dimerisation domain-like › EB1 dimerisation domain-like › EB1 dimerisation domain-like | 0.61 | 51.0 | 4.27e-01 | 100.0% | 63.2% |
| 4016362 | 129.1.1.11 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › ApbA_C | 0.61 | 45.0 | 3.35e-01 | 84.3% | 35.9% |
| 5063259 | 601.33.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain › CHAD | 0.60 | 49.0 | 3.87e-01 | 98.0% | 75.2% |
| 3575062 | 109.4.1.886 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_DOCK | 0.60 | 40.0 | 2.45e-01 | 70.6% | 9.9% |
| 4679869 | 632.15.1.4 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) › HSP70 | 0.59 | 47.0 | 4.17e-01 | 98.0% | 83.5% |
| 4510823 | 129.1.1.9 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › NAD_Gly3P_dh_C | 0.58 | 44.0 | 3.35e-01 | 92.2% | 34.0% |
| 4091592 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.58 | 43.0 | 2.54e-01 | 86.3% | 89.7% |
| 4950943 | 129.1.1.9 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › NAD_Gly3P_dh_C | 0.55 | 46.0 | 3.41e-01 | 98.0% | 55.9% |
| 3895470 | 3826.1.1.0 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) | 0.55 | 39.0 | 3.36e-01 | 80.4% | 71.6% |
| 4489382 | 129.1.1.9 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › NAD_Gly3P_dh_C | 0.55 | 43.0 | 3.27e-01 | 96.1% | 39.6% |
| None | — | 0.54 | 41.0 | 3.38e-01 | 98.0% | 46.8% | |
| 4119449 | 109.4.1.1151 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HIR3_helical | 0.54 | 46.0 | 2.82e-01 | 92.2% | 29.8% |
| 3613902 | 129.1.1.9 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › NAD_Gly3P_dh_C | 0.54 | 42.0 | 3.15e-01 | 94.1% | 46.3% |