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AB366653.2__BAG41575.1__X__00130
Bact-VirAB366653.2__BAG41575.1__X__00130
Identity
- Accession:
- AB366653 ↗
- Kingdom:
- phage
Quality
63.8
mean pLDDT
Taxonomy
TaxID: 1980924
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 20-72
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4bolA02 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.75 | 61.0 | 5.34e-01 | 100.0% | 60.0% |
| 1p6rA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 48.0 | 4.15e-01 | 96.2% | 46.3% |
| 4o7iA01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.69 | 55.0 | 3.81e-01 | 88.7% | 48.9% |
| 2ma3A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 49.0 | 4.19e-01 | 96.2% | 48.9% |
| 7aj9A01 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.66 | 53.0 | 5.03e-01 | 100.0% | 76.1% |
| 8hbfB01 | 3.90.1520.10 | Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain | 0.65 | 54.0 | 3.82e-01 | 96.2% | 37.0% |
| 3eeeA00 | 3.90.1520.10 | Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain | 0.63 | 51.0 | 3.60e-01 | 96.2% | 35.1% |
| 1cgqA00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.62 | 51.0 | 3.99e-01 | 92.5% | 84.3% |
| 8dq6A01 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.62 | 51.0 | 4.16e-01 | 92.5% | 97.0% |
| 8dqaA01 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.62 | 49.0 | 4.10e-01 | 90.6% | 99.0% |
| 3t5sA00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.62 | 50.0 | 4.16e-01 | 92.5% | 94.8% |
| 1vw5B00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.61 | 50.0 | 3.95e-01 | 92.5% | 86.7% |
| 2aajA00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.59 | 48.0 | 3.71e-01 | 92.5% | 81.4% |
| 1vw4801 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.59 | 47.0 | 4.36e-01 | 96.2% | 84.9% |
| 1bqbA02 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.58 | 46.0 | 3.45e-01 | 92.5% | 89.6% |
| 3cz6A01 | 1.20.120.1480 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.57 | 48.0 | 3.89e-01 | 96.2% | 54.8% |
| 2cg5B00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.57 | 47.0 | 4.34e-01 | 96.2% | 90.1% |
| 6fhpD00 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.56 | 43.0 | 4.20e-01 | 88.7% | 79.0% |
| 1wp9B03 | 1.20.1320.20 | Mainly Alpha › Up-down Bundle › phosphoenolpyruvate carboxylase, domain 3 › hef helicase domain | 0.56 | 46.0 | 3.62e-01 | 100.0% | 71.5% |
| 7x0fB01 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.55 | 45.0 | 4.13e-01 | 96.2% | 86.3% |
| 5ey9A01 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.53 | 43.0 | 3.34e-01 | 92.5% | 85.7% |
| 5bpxA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 42.0 | 3.12e-01 | 90.6% | 94.1% |
| 1a0iA03 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.53 | 38.0 | 2.98e-01 | 84.9% | 95.3% |
| 2zyzB01 | 3.40.1170.20 | Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › tRNA intron endonuclease, N-terminal domain | 0.52 | 40.0 | 3.60e-01 | 94.3% | 68.2% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4933407 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 47.0 | 4.66e-01 | 96.2% | 67.3% |
| 3222858 | 873.1.1.5 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HNOB | 0.66 | 55.0 | 3.81e-01 | 96.2% | 33.8% |
| None | — | 0.65 | 51.0 | 4.46e-01 | 96.2% | 56.2% | |
| 3800834 | 105.1.1.0 ↗ | alpha duplicates or obligate multimers › HLH-like › HLH, helix-loop-helix DNA-binding domain › HLH, helix-loop-helix DNA-binding domain | 0.63 | 43.0 | 3.50e-01 | 71.7% | 40.0% |
| 3448333 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.61 | 50.0 | 4.41e-01 | 92.5% | 62.5% |
| 3432362 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.61 | 50.0 | 3.84e-01 | 92.5% | 40.0% |
| 5045111 | 3930.1.1.3 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase › RNA_helicase_helical | 0.61 | 53.0 | 3.99e-01 | 100.0% | 71.9% |
| 3650038 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.60 | 48.0 | 3.68e-01 | 96.2% | 36.3% |
| 3295046 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.60 | 48.0 | 3.76e-01 | 94.3% | 39.2% |
| 3961879 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.60 | 50.0 | 4.18e-01 | 96.2% | 64.2% |
| 3334694 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.59 | 50.0 | 4.37e-01 | 98.1% | 63.5% |
| 3442297 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.59 | 47.0 | 4.14e-01 | 92.5% | 59.5% |
| 3311239 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.59 | 47.0 | 3.66e-01 | 94.3% | 39.2% |
| 3296786 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.59 | 46.0 | 3.69e-01 | 94.3% | 40.8% |
| 5030468 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.58 | 47.0 | 4.07e-01 | 98.1% | 56.7% |
| 3642648 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.58 | 46.0 | 4.07e-01 | 94.3% | 63.5% |
| 3248050 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.58 | 44.0 | 3.21e-01 | 86.8% | 52.5% |
| 5032344 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.58 | 48.0 | 3.59e-01 | 100.0% | 60.0% |
| 3293469 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.57 | 44.0 | 4.31e-01 | 94.3% | 78.3% |
| 3379716 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.57 | 45.0 | 3.57e-01 | 94.3% | 40.0% |
| 3369798 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.56 | 46.0 | 4.06e-01 | 98.1% | 60.0% |
| 3646451 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.56 | 45.0 | 3.61e-01 | 98.1% | 45.0% |
| 3426912 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.55 | 44.0 | 4.02e-01 | 98.1% | 63.7% |
| 3421598 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.55 | 44.0 | 3.51e-01 | 98.1% | 40.8% |
| 3312431 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.55 | 44.0 | 3.47e-01 | 94.3% | 40.8% |
| 3341306 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.55 | 43.0 | 3.42e-01 | 92.5% | 41.6% |
| 3782428 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.54 | 46.0 | 3.55e-01 | 96.2% | 82.5% |
| 5014005 | 614.1.1.0 ↗ | alpha duplicates or obligate multimers › L27 domain › L27 domain › L27 domain | 0.54 | 42.0 | 3.77e-01 | 88.7% | 86.3% |
| 3348250 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.54 | 40.0 | 3.19e-01 | 96.2% | 36.0% |
| 4961658 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.53 | 44.0 | 3.41e-01 | 96.2% | 72.3% |
| 4971181 | 2007.1.14.5 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Peripla_BP_2 | 0.53 | 44.0 | 3.21e-01 | 96.2% | 35.8% |
| 3927986 | 192.15.1.120 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › ASC | 0.53 | 44.0 | 3.61e-01 | 92.5% | 56.0% |
| 3431469 | 176.1.1.0 ↗ | alpha arrays › Annexin › Annexin › Annexin | 0.52 | 40.0 | 3.57e-01 | 86.8% | 82.5% |
| 3706636 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.51 | 41.0 | 3.62e-01 | 90.6% | 81.2% |