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AB366653.2__BAG41594.1__X__00148

Bact-Vir

AB366653.2__BAG41594.1__X__00148

Identity

Accession:
AB366653 ↗
Kingdom:
phage

Quality

81.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Mieseafarmvirus› Ralstonia_phage_phiRSL1

TaxID: 1980924

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-63
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 49.0 4.82e-01 100.0% 77.9%
2rm4A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.63 49.0 4.85e-01 100.0% 78.8%
1y0mA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 51.0 5.10e-01 100.0% 91.8%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 41.0 4.06e-01 100.0% 68.2%
4z88A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 49.0 4.82e-01 100.0% 98.5%
2fb7A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.53 45.0 4.17e-01 100.0% 80.0%
3tfmA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 42.0 3.66e-01 93.4% 91.9%
3vn5A01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.52 33.0 3.22e-01 80.3% 56.5%
2psoB02 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 39.0 2.98e-01 90.2% 71.3%
6g20A01 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.51 42.0 2.92e-01 90.2% 46.2%
4gw9A01 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.51 41.0 2.84e-01 90.2% 47.9%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3795384 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 48.0 3.33e-01 100.0% 22.8%
4959077 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 54.0 5.41e-01 100.0% 96.9%
3979903 4.1.1.465 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_6, SH3_7 0.62 55.0 3.56e-01 100.0% 23.6%
4969566 4.1.1.301 ↗ beta barrels › SH3 › SH3 › SH3 › MJ1316 0.61 44.0 4.11e-01 100.0% 60.0%
3543981 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 48.0 4.76e-01 100.0% 84.6%
4184660 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 51.0 4.13e-01 100.0% 86.9%
3590315 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.59 51.0 4.85e-01 100.0% 90.7%
3926179 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 47.0 4.66e-01 100.0% 86.2%
3249603 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 50.0 4.75e-01 100.0% 82.7%
3629316 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 44.0 3.81e-01 100.0% 52.0%
3935507 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 48.0 4.15e-01 100.0% 66.0%
3592075 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 45.0 4.13e-01 100.0% 76.5%
5070306 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 46.0 4.01e-01 100.0% 75.0%
3786412 4.1.1.344 ↗ beta barrels › SH3 › SH3 › SH3 › PF31193 0.53 46.0 4.24e-01 100.0% 76.2%
3644335 5.1.4.271 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, PF30361 0.52 44.0 2.72e-01 100.0% 86.3%
3761319 4.1.1.253 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4537 0.51 42.0 4.19e-01 100.0% 92.3%
5013956 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.51 40.0 3.14e-01 96.7% 91.3%
4679871 331.1.1.6 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › DUF3378 0.50 31.0 2.95e-01 88.5% 47.5%