←Back to structures
AB452988.1__BAH15154.1__X__00001
Bact-VirAB452988.1__BAH15154.1__X__00001
Identity
- Accession:
- AB452988 ↗
- Kingdom:
- phage
Quality
80.1
mean pLDDT
Taxonomy
TaxID: 552527
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 60-167
Domain cluster:
rep: NC_049453.1__YP_009882649.1__HYP82_gp50__00006__D23-124
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4alzA03 | 3.30.70.1770 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 42.0 | 5.10e-01 | 70.4% | 100.0% |
| 3tr3A00 | 3.30.300.90 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › BolA-like | 0.66 | 44.0 | 5.03e-01 | 70.4% | 94.8% |
| 4g1iA03 | 3.30.70.1770 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 41.0 | 4.91e-01 | 71.3% | 98.6% |
| 4hlbA00 | 3.30.70.2960 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 49.0 | 5.14e-01 | 79.6% | 96.8% |
| 3n2qA02 | 3.30.300.190 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.65 | 54.0 | 5.36e-01 | 100.0% | 85.3% |
| 2e0gA00 | 3.30.300.180 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › DnaA, N-terminal domain | 0.64 | 44.0 | 4.42e-01 | 70.4% | 73.8% |
| 3m7vA02 | 3.30.70.1250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phosphopentomutase | 0.62 | 46.0 | 4.47e-01 | 78.7% | 95.9% |
| 1yj7D02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.61 | 41.0 | 4.52e-01 | 71.3% | 86.2% |
| 1p7lA03 | 3.30.300.10 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.61 | 42.0 | 4.28e-01 | 71.3% | 88.7% |
| 3ib5A00 | 3.10.570.10 | Alpha Beta › Roll › sex pheromone staph- cam373 precursor fold › sex pheromone staph- cam373 precursor domain | 0.60 | 54.0 | 3.82e-01 | 100.0% | 44.4% |
| 3ux3A01 | 3.30.300.130 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › Fe-S cluster assembly (FSCA) | 0.60 | 42.0 | 4.42e-01 | 72.2% | 89.7% |
| 3kxwA02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.60 | 53.0 | 5.09e-01 | 96.3% | 88.7% |
| 4hn3A00 | 3.10.570.10 | Alpha Beta › Roll › sex pheromone staph- cam373 precursor fold › sex pheromone staph- cam373 precursor domain | 0.59 | 53.0 | 3.78e-01 | 100.0% | 45.5% |
| 3dnsA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.57 | 44.0 | 4.19e-01 | 82.4% | 100.0% |
| 6l4lA02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.56 | 50.0 | 4.62e-01 | 98.1% | 83.1% |
| 1i74A02 | 3.10.310.20 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › DHHA2 domain | 0.55 | 44.0 | 4.32e-01 | 95.4% | 79.8% |
| 3og2A03 | 2.60.390.10 | Mainly Beta › Sandwich › beta-galactosidase, domain 3 › Beta-galactosidase, domain 3 | 0.54 | 40.0 | 4.35e-01 | 99.1% | 95.5% |
| 2rrlA01 | 3.30.750.140 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › | 0.54 | 37.0 | 3.70e-01 | 72.2% | 69.6% |
| 5ifpA03 | 2.60.390.10 | Mainly Beta › Sandwich › beta-galactosidase, domain 3 › Beta-galactosidase, domain 3 | 0.53 | 40.0 | 4.34e-01 | 99.1% | 95.5% |
| 3peaF00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.52 | 46.0 | 3.54e-01 | 100.0% | 87.1% |
| 3gkbA00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.51 | 42.0 | 3.16e-01 | 90.7% | 48.9% |
| 3njdA00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.51 | 44.0 | 3.35e-01 | 100.0% | 80.3% |
| 1sr4B00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.50 | 44.0 | 3.42e-01 | 100.0% | 49.6% |
| 1oheA01 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.50 | 38.0 | 3.48e-01 | 81.5% | 67.1% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3958022 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.73 | 52.0 | 4.86e-01 | 73.1% | 80.0% |
| 5031280 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.72 | 49.0 | 4.37e-01 | 70.4% | 63.2% |
| 1851173 | 3261.1.1.4 ↗ | a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › Yop-YscD_ppl_3rd | 0.69 | 42.0 | 5.11e-01 | 70.4% | 100.0% |
| 4928951 | 327.7.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › FKBP26_C | 0.67 | 43.0 | 5.20e-01 | 70.4% | 100.0% |
| 4236550 | 2003.1.5.82 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 | 0.67 | 50.0 | 3.32e-01 | 78.7% | 23.7% |
| 1164098 | 3535.1.1.1 ↗ | a+b two layers › Sex pheromone staph-cAM373 › Sex pheromone staph-cAM373 › Sex pheromone staph-cAM373 › CamS | 0.65 | 54.0 | 5.36e-01 | 100.0% | 85.3% |
| 3178317 | 327.5.1.6 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-dom_DIP2-like | 0.65 | 48.0 | 4.55e-01 | 78.7% | 85.4% |
| 1673882 | 3261.1.1.1 ↗ | a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › BON | 0.62 | 37.0 | 4.31e-01 | 71.3% | 86.1% |
| 5013125 | 327.6.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like › FeS_assembly_P | 0.62 | 45.0 | 4.81e-01 | 75.9% | 98.9% |
| 4213821 | 327.6.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like | 0.61 | 40.0 | 4.65e-01 | 70.4% | 97.3% |
| 175525 | 327.5.1.6 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-dom_DIP2-like | 0.60 | 53.0 | 5.06e-01 | 96.3% | 87.3% |
| 4928454 | 327.6.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like › FeS_assembly_P | 0.59 | 46.0 | 4.73e-01 | 84.3% | 97.0% |
| 3887088 | 4070.1.1.0 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like | 0.58 | 45.0 | 3.83e-01 | 86.1% | 80.0% |
| 5035604 | 327.6.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like › FeS_assembly_P | 0.57 | 46.0 | 4.60e-01 | 88.9% | 91.2% |
| 4941909 | 327.18.1.4 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › 40S ribosomal protein S7-A › 40S ribosomal protein S7-A › KH_1 | 0.57 | 39.0 | 4.03e-01 | 70.4% | 76.0% |
| 4953039 | 327.6.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like › FeS_assembly_P | 0.56 | 42.0 | 4.68e-01 | 98.1% | 100.0% |
| 3182836 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.55 | 48.0 | 4.16e-01 | 100.0% | 60.6% |
| 4968042 | 131.1.1.40 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD-CE | 0.55 | 45.0 | 3.41e-01 | 92.6% | 79.3% |
| 3265023 | 311.1.1.0 ↗ | a+b three layers › Phoshotransferase/anion transport protein › Phoshotransferase/anion transport protein › Phoshotransferase/anion transport protein | 0.53 | 45.0 | 3.84e-01 | 97.2% | 75.8% |
| 4215092 | 3012.1.1.4 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Hydrolase_3 | 0.51 | 38.0 | 3.68e-01 | 78.7% | 96.7% |
| 3506045 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.50 | 37.0 | 3.13e-01 | 100.0% | 44.9% |
D2
medium
residues 1-57