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AB560486.1__BAM37073.1__X__00075
Bact-VirAB560486.1__BAM37073.1__X__00075
Identity
- Accession:
- AB560486 ↗
- Kingdom:
- phage
Quality
75.6
mean pLDDT
Taxonomy
TaxID: 763998
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 9-108
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4qhpA05 | 1.25.50.10 | Mainly Alpha › Alpha Horseshoe › Zincin-like fold › Peptidase M1, alanyl aminopeptidase, C-terminal domain | 0.56 | 41.0 | 2.89e-01 | 77.0% | 51.7% |
| 2fpqA00 | 3.90.1240.10 | Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" | 0.53 | 39.0 | 2.66e-01 | 79.0% | 72.7% |
| 3o39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.53 | 32.0 | 3.28e-01 | 70.0% | 60.4% |
| 4mhcA01 | 1.20.58.1780 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 36.0 | 2.75e-01 | 74.0% | 79.6% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3903162 | 109.59.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Intraflagellar transport protein 80 (IFT80) C-terminal domain › Intraflagellar transport protein 80 (IFT80) C-terminal domain | 0.57 | 43.0 | 3.31e-01 | 80.0% | 87.8% |
| 3339561 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.57 | 35.0 | 3.51e-01 | 96.0% | 60.0% |
| 4569984 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.57 | 47.0 | 3.12e-01 | 92.0% | 74.7% |
| 3488978 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.56 | 36.0 | 2.62e-01 | 94.0% | 22.4% |
| 3504673 | 109.4.1.469 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › INTS15 | 0.56 | 45.0 | 3.16e-01 | 91.0% | 95.6% |
| 4027114 | 3331.1.1.8 ↗ | a+b two layers › Uncharacterized protein yibL › Uncharacterized protein yibL › Uncharacterized protein yibL › RRP36 | 0.55 | 39.0 | 3.59e-01 | 74.0% | 92.6% |
| 4002063 | 109.4.1.1593 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT, HEAT_EZ, Importin_rep_4, Importin_rep_5, Importin_rep_6, TPR_IMB1, TPR_IPO5 | 0.55 | 44.0 | 2.58e-01 | 91.0% | 31.4% |
| 3486831 | 220.1.1.22 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C | 0.55 | 34.0 | 2.59e-01 | 93.0% | 24.9% |
| 3544502 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 43.0 | 3.39e-01 | 86.0% | 90.5% |
| 4300897 | 5094.1.1.1 ↗ | a+b duplicates or obligate multimers › OmpH-like › OmpH-like › OmpH-like › OmpH | 0.54 | 32.0 | 2.99e-01 | 96.0% | 44.6% |
| 3714594 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 42.0 | 3.76e-01 | 85.0% | 83.4% |
| 3235839 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.53 | 33.0 | 2.76e-01 | 94.0% | 34.9% |
| 3172208 | 109.4.1.1298 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fes1, PF28415 | 0.53 | 41.0 | 3.00e-01 | 83.0% | 64.1% |
| 3934904 | 109.4.1.106 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CPL | 0.53 | 43.0 | 2.77e-01 | 91.0% | 56.6% |
| 3226696 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 38.0 | 3.12e-01 | 74.0% | 83.7% |
| 3314132 | 376.1.6.10 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR, PF26200 | 0.53 | 37.0 | 3.30e-01 | 74.0% | 74.7% |
| 3495261 | 109.4.1.1844 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_10, TPR_12 | 0.52 | 42.0 | 2.77e-01 | 87.0% | 30.3% |
| 3301922 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 45.0 | 2.85e-01 | 100.0% | 44.3% |
| 1551401 | 3869.1.1.1 ↗ | alpha arrays › Mitochondrial 54S ribosomal protein L2 › Mitochondrial 54S ribosomal protein L2 › Mitochondrial 54S ribosomal protein L2 › Ribosomal_L27_C | 0.51 | 32.0 | 2.53e-01 | 85.0% | 27.4% |
| 4453179 | 7013.1.1.1 ↗ | alpha bundles › Ribosome assembly factor Efg1-like › Ribosome assembly factor Efg1-like › Ribosome assembly factor Efg1-like › Efg1 | 0.51 | 35.0 | 2.82e-01 | 72.0% | 37.9% |