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AB605730.1__BAK52850.1__X__00038
Bact-VirAB605730.1__BAK52850.1__X__00038
Identity
- Accession:
- AB605730 ↗
- Kingdom:
- phage
Quality
78.6
mean pLDDT
Taxonomy
TaxID: 941058
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-90
Domain cluster:
rep: OM982673.1__UPI13000.1__X__00021__D1-68
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pk8A00 | 3.30.2320.10 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › hypothetical protein PF0899 domain | 0.78 | 62.0 | 6.08e-01 | 95.5% | 79.8% |
| 1ohgA02 | 3.30.2320.10 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › hypothetical protein PF0899 domain | 0.74 | 61.0 | 5.78e-01 | 88.6% | 74.3% |
| 2e0zC03 | 3.30.2320.10 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › hypothetical protein PF0899 domain | 0.70 | 50.0 | 4.85e-01 | 90.9% | 67.7% |
| 3bjqA00 | 3.90.1690.10 | Alpha Beta › Alpha-Beta Complex › phage-related protein like fold › phage-related protein like domain | 0.70 | 59.0 | 4.01e-01 | 90.9% | 30.1% |
| 3dktA02 | 3.30.2320.10 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › hypothetical protein PF0899 domain | 0.65 | 49.0 | 4.84e-01 | 86.4% | 75.8% |
| 1yueA03 | 3.30.2320.40 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › | 0.64 | 55.0 | 4.88e-01 | 92.0% | 69.4% |
| 7qpgW01 | 1.10.357.150 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › | 0.59 | 42.0 | 3.37e-01 | 77.3% | 39.5% |
| 2qxlB01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.57 | 46.0 | 3.94e-01 | 85.2% | 67.2% |
| 2dm9A00 | 3.30.2320.30 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › ATP synthase, E subunit, C-terminal | 0.57 | 42.0 | 3.82e-01 | 95.5% | 58.5% |
| 1lh0B00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 41.0 | 3.15e-01 | 76.1% | 60.2% |
| 2khoA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.56 | 48.0 | 3.91e-01 | 93.2% | 69.2% |
| 1wz2A04 | 3.30.2320.20 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › Class I aminoacyl-tRNA synthetases (RS) | 0.55 | 47.0 | 4.76e-01 | 96.6% | 98.9% |
| 5ep0A03 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.55 | 29.0 | 3.19e-01 | 78.4% | 61.4% |
| 1a5aB02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 41.0 | 3.07e-01 | 80.7% | 78.5% |
| 1cvlA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 42.0 | 2.96e-01 | 87.5% | 74.4% |
| 3l6uA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 44.0 | 3.74e-01 | 90.9% | 78.9% |
| 3aoeC03 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 43.0 | 3.61e-01 | 89.8% | 80.1% |
| 4ccsA02 | 3.40.50.1400 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 43.0 | 3.87e-01 | 90.9% | 91.8% |
| 3wxmB02 | 3.30.420.60 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 | 0.52 | 39.0 | 3.53e-01 | 93.2% | 58.2% |
| 5k1rA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.52 | 42.0 | 3.13e-01 | 90.9% | 44.3% |
| 1qz9A02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.51 | 42.0 | 3.08e-01 | 92.0% | 40.2% |
| 4gniB01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 43.0 | 3.55e-01 | 90.9% | 58.8% |
| 2ihtA03 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.50 | 41.0 | 3.13e-01 | 89.8% | 50.5% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5083777 | 2485.3.1.3 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid | 0.71 | 59.0 | 4.02e-01 | 88.6% | 26.0% |
| 333200 | 2485.3.1.1 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_cap_E | 0.71 | 59.0 | 4.03e-01 | 90.9% | 31.4% |
| 2639625 | 2485.3.1.18 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid_4 | 0.70 | 57.0 | 4.00e-01 | 88.6% | 27.9% |
| 4988094 | 2485.3.1.18 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid_4 | 0.69 | 58.0 | 4.10e-01 | 90.9% | 33.7% |
| 5011908 | 2485.3.1.2 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Linocin_M18 | 0.69 | 51.0 | 3.74e-01 | 90.9% | 29.2% |
| 4020211 | 7590.1.1.0 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs | 0.66 | 46.0 | 3.83e-01 | 80.7% | 43.4% |
| 4261555 | 298.4.1.1 ↗ | a+b two layers › FwdE/GAPDH domain-like › V-type ATPase subunit E › V-type ATPase subunit E › vATP-synt_E | 0.63 | 42.0 | 3.41e-01 | 90.9% | 36.4% |
| 4292828 | 298.4.1.1 ↗ | a+b two layers › FwdE/GAPDH domain-like › V-type ATPase subunit E › V-type ATPase subunit E › vATP-synt_E | 0.62 | 41.0 | 4.06e-01 | 90.9% | 63.2% |
| 4638799 | 298.4.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › V-type ATPase subunit E › V-type ATPase subunit E | 0.59 | 41.0 | 3.67e-01 | 89.8% | 50.4% |
| 4097188 | 298.4.1.2 ↗ | a+b two layers › FwdE/GAPDH domain-like › V-type ATPase subunit E › V-type ATPase subunit E › FliH | 0.59 | 40.0 | 3.71e-01 | 86.4% | 55.5% |
| 5025399 | 3008.1.1.0 ↗ | a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.58 | 47.0 | 4.91e-01 | 95.5% | 97.5% |
| 4234040 | 7573.1.1.1 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran | 0.58 | 41.0 | 3.20e-01 | 76.1% | 61.5% |
| 4947607 | 7573.1.1.0 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like | 0.57 | 40.0 | 3.03e-01 | 73.9% | 73.3% |
| 4080307 | 3008.1.1.0 ↗ | a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.57 | 43.0 | 4.65e-01 | 98.9% | 97.3% |
| 4422880 | 7573.1.1.1 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran | 0.57 | 44.0 | 3.45e-01 | 81.8% | 70.2% |
| 4941039 | 3008.1.1.0 ↗ | a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.56 | 48.0 | 4.87e-01 | 95.5% | 98.9% |
| 5065579 | 3008.1.1.0 ↗ | a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.56 | 49.0 | 4.92e-01 | 96.6% | 97.7% |
| 5044279 | 298.4.1.1 ↗ | a+b two layers › FwdE/GAPDH domain-like › V-type ATPase subunit E › V-type ATPase subunit E › vATP-synt_E | 0.56 | 42.0 | 3.67e-01 | 90.9% | 52.6% |
| 5000614 | 298.4.1.1 ↗ | a+b two layers › FwdE/GAPDH domain-like › V-type ATPase subunit E › V-type ATPase subunit E › vATP-synt_E | 0.56 | 43.0 | 3.87e-01 | 92.0% | 59.2% |
| 3529174 | 7525.1.1.2 ↗ | a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_2 | 0.56 | 43.0 | 2.83e-01 | 86.4% | 44.1% |
| 4959577 | 3008.1.1.0 ↗ | a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.54 | 46.0 | 4.64e-01 | 95.5% | 96.6% |
| 4367925 | 298.4.1.1 ↗ | a+b two layers › FwdE/GAPDH domain-like › V-type ATPase subunit E › V-type ATPase subunit E › vATP-synt_E | 0.53 | 38.0 | 2.99e-01 | 90.9% | 33.5% |
| 4958802 | 3003.1.1.0 ↗ | a+b complex topology › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) | 0.53 | 38.0 | 3.89e-01 | 76.1% | 90.6% |
| 4942777 | 3003.1.1.1 ↗ | a+b complex topology › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) › MCM_N | 0.52 | 37.0 | 3.60e-01 | 75.0% | 80.0% |
| 4054249 | 298.4.1.1 ↗ | a+b two layers › FwdE/GAPDH domain-like › V-type ATPase subunit E › V-type ATPase subunit E › vATP-synt_E | 0.52 | 41.0 | 3.43e-01 | 90.9% | 48.4% |
| 4269270 | 3008.1.1.0 ↗ | a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.52 | 44.0 | 4.41e-01 | 95.5% | 98.9% |
| 3282436 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.52 | 45.0 | 3.29e-01 | 100.0% | 96.2% |
| 5030361 | 3003.1.1.1 ↗ | a+b complex topology › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) › MCM_N | 0.52 | 36.0 | 3.54e-01 | 75.0% | 79.0% |
| 3956116 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.51 | 39.0 | 3.56e-01 | 84.1% | 81.6% |
| 5012245 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.51 | 39.0 | 3.42e-01 | 83.0% | 80.4% |
| 4079005 | 298.4.1.6 ↗ | a+b two layers › FwdE/GAPDH domain-like › V-type ATPase subunit E › V-type ATPase subunit E › T3SS_SCTL | 0.51 | 39.0 | 3.49e-01 | 93.2% | 57.6% |
| 4184529 | 7579.1.1.10 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Thioesterase | 0.51 | 41.0 | 2.95e-01 | 89.8% | 88.6% |
| 4941240 | 3003.1.1.1 ↗ | a+b complex topology › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) › MCM_N | 0.51 | 35.0 | 3.60e-01 | 72.7% | 90.6% |
| 4412841 | 298.4.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › V-type ATPase subunit E › V-type ATPase subunit E | 0.51 | 40.0 | 3.49e-01 | 90.9% | 55.6% |
| 3276500 | 301.7.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like › Ribonuc_L-PSP | 0.51 | 44.0 | 3.60e-01 | 100.0% | 56.6% |
| 3177868 | 301.7.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like | 0.51 | 42.0 | 3.53e-01 | 92.0% | 58.1% |