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AB767244.1__BAM68832.1__X__00011

Bact-Vir

AB767244.1__BAM68832.1__X__00011

Identity

Accession:
AB767244 ↗
Kingdom:
phage

Quality

73.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Yokohamavirus› Edwardsiella_phage_MSW-3

TaxID: 1264700

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 16-90
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 41.0 4.15e-01 73.3% 69.9%
4hkhA00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.50 35.0 2.86e-01 72.0% 62.4%
4chkB00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.50 30.0 2.84e-01 77.3% 46.2%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3795121 4.1.1.110 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_FRX1 0.64 41.0 4.40e-01 70.7% 75.4%
3399412 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.60 40.0 3.96e-01 73.3% 65.0%
3474715 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 40.0 4.21e-01 73.3% 83.1%
3921418 233.1.1.0 ↗ a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain 0.54 42.0 4.11e-01 88.0% 76.5%
4646501 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 39.0 3.12e-01 80.0% 48.4%
3251163 245.1.1.1 ↗ a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C 0.53 47.0 4.40e-01 97.3% 94.4%
3399617 245.1.1.1 ↗ a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C 0.52 44.0 4.23e-01 97.3% 94.4%
3770827 376.1.1.20 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.52 38.0 3.67e-01 82.7% 69.4%
1124583 1.1.5.23 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.50 35.0 2.86e-01 72.0% 62.4%