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AB775548.1__BAO20647.1__X__00047

Bact-Vir

AB775548.1__BAO20647.1__X__00047

Identity

Accession:
AB775548 ↗
Kingdom:
phage

Quality

87.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 54-111
PDB
Domain cluster: representative
CATH (75)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1hr5A00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.90 69.0 7.58e-01 81.0% 97.9%
3onjA00 1.20.58.400 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins 0.89 72.0 5.96e-01 86.2% 54.6%
6r1nA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.87 76.0 6.13e-01 93.1% 57.3%
4kzsA02 6.10.140.1870 Special › Helix non-globular › Helix Hairpins › 0.87 73.0 6.82e-01 93.1% 74.3%
2rkhA02 1.20.1280.20 Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain 0.87 76.0 6.82e-01 93.1% 80.3%
1uurA01 1.20.58.240 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › STAT; domain 1 0.86 77.0 6.09e-01 96.6% 68.2%
4iloA00 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.84 73.0 4.70e-01 93.1% 25.4%
3vkgB03 1.20.58.1120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dynein motor heavy chain, linker domain, subdomain 4 0.84 77.0 5.45e-01 98.3% 39.1%
3sjqC00 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.83 67.0 5.94e-01 93.1% 62.5%
1z0pA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.83 69.0 6.36e-01 94.8% 71.2%
3a8pA02 6.10.140.680 Special › Helix non-globular › Helix Hairpins › 0.83 76.0 5.96e-01 100.0% 54.4%
4a17U01 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.82 69.0 6.21e-01 89.7% 67.5%
1y1uA01 1.20.1050.20 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › STAT transcription factor, all-alpha domain 0.82 70.0 4.75e-01 93.1% 41.0%
2hjmA01 1.20.120.460 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › protein pf1176 like 0.81 64.0 5.57e-01 84.5% 57.0%
2e9xA01 1.20.58.1030 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.81 74.0 5.56e-01 98.3% 51.6%
1vq8V00 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.81 68.0 6.52e-01 89.7% 80.0%
2ic6A00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.80 70.0 6.53e-01 98.3% 78.9%
1z0jB00 4.10.860.20 Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain 0.80 57.0 6.11e-01 75.9% 96.1%
2bdeA03 1.20.58.1160 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.79 68.0 6.16e-01 93.1% 71.4%
3na7A00 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.79 70.0 4.56e-01 98.3% 43.0%
1a36A04 1.10.132.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › 0.79 67.0 4.68e-01 93.1% 30.9%
4mtxD00 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.79 69.0 5.90e-01 100.0% 66.3%
1s35A01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.79 68.0 5.75e-01 100.0% 62.4%
4e4eA01 1.10.287.990 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain 0.78 70.0 6.54e-01 100.0% 84.5%
1gqeA01 1.20.58.410 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Release factor 0.78 69.0 5.48e-01 98.3% 52.2%
3txsC01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.77 69.0 6.29e-01 98.3% 78.7%
4l6rA02 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.77 69.0 4.33e-01 98.3% 19.9%
6iknD01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.77 65.0 4.15e-01 93.1% 20.2%
4ijjB00 1.20.120.910 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain 0.77 70.0 5.31e-01 100.0% 49.2%
8fbnB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.76 67.0 4.50e-01 100.0% 30.6%
4aflA00 6.10.140.1740 Special › Helix non-globular › Helix Hairpins › 0.76 69.0 5.67e-01 100.0% 77.5%
3rkgA02 1.20.58.340 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region 0.75 62.0 4.47e-01 91.4% 50.0%
3mq1A01 1.20.58.970 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.75 63.0 5.49e-01 96.6% 76.1%
1b3qA01 1.10.287.560 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Histidine kinase CheA-like, homodimeric domain 0.75 64.0 6.30e-01 98.3% 95.2%
4b6xA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.74 59.0 5.68e-01 93.1% 76.8%
1j30A00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.74 62.0 4.64e-01 100.0% 38.3%
2lqgA00 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.74 60.0 4.57e-01 91.4% 39.1%
2i0mA01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.74 62.0 5.06e-01 93.1% 51.9%
4q20A01 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.73 57.0 5.17e-01 87.9% 67.1%
1zpyA00 6.10.140.1960 Special › Helix non-globular › Helix Hairpins › 0.73 59.0 5.17e-01 98.3% 59.3%
2gtsA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.73 65.0 5.92e-01 100.0% 77.9%
4dciA00 6.10.140.1110 Special › Helix non-globular › Helix Hairpins › 0.73 61.0 4.59e-01 96.6% 58.5%
2r9iA00 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.72 55.0 5.25e-01 91.4% 70.4%
3b2eF00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.72 57.0 5.68e-01 91.4% 85.5%
1fioA00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.72 62.0 4.35e-01 98.3% 76.8%
1y6xA00 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.71 61.0 5.33e-01 96.6% 63.2%
8cdaB03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.71 61.0 4.54e-01 100.0% 91.8%
1ku9A02 1.10.287.450 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.71 58.0 5.74e-01 100.0% 89.1%
2ke4A00 6.10.140.470 Special › Helix non-globular › Helix Hairpins › 0.70 57.0 4.80e-01 100.0% 53.1%
3okqA00 1.20.58.1540 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Actin interacting protein 3, C-terminal domain 0.70 59.0 4.72e-01 98.3% 57.6%
3m9vA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.70 60.0 4.47e-01 100.0% 88.5%
4errB00 1.20.58.1190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.70 53.0 4.70e-01 81.0% 59.0%
1pd3A00 1.10.287.230 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.70 54.0 5.53e-01 87.9% 96.3%
1luwA01 1.10.287.990 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain 0.69 58.0 5.71e-01 98.3% 89.1%
4l0rB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.69 58.0 5.44e-01 100.0% 78.1%
3l1nA01 6.10.140.790 Special › Helix non-globular › Helix Hairpins › 0.69 54.0 5.70e-01 87.9% 100.0%
6xm1A02 3.90.830.10 Alpha Beta › Alpha-Beta Complex › Syntaxin Binding Protein 1; Chain A, domain 2 › Sec1/Munc18 (SM) protein, domain 3a 0.68 57.0 4.69e-01 96.6% 90.3%
8c4aA01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.68 54.0 3.20e-01 89.7% 11.3%
3favD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.68 55.0 5.08e-01 93.1% 79.5%
2yf4F00 1.10.3420.10 Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain 0.67 55.0 4.23e-01 96.6% 46.9%
3qavA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.67 53.0 4.18e-01 94.8% 45.7%
1ma1A01 1.10.287.990 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain 0.67 56.0 5.50e-01 98.3% 89.1%
3fhnA01 6.10.280.210 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dsl1p vesicle tethering complex, Tip20p subunit, domain A 0.66 55.0 4.00e-01 100.0% 37.5%
4h63H01 1.20.58.1710 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.66 54.0 5.07e-01 93.1% 79.2%
3l1nA02 1.20.1280.140 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.66 57.0 5.03e-01 100.0% 69.0%
4w4kA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.66 55.0 5.05e-01 100.0% 85.4%
2c2aA01 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.65 52.0 4.62e-01 93.1% 62.2%
2lpeA01 6.10.140.1120 Special › Helix non-globular › Helix Hairpins › 0.65 55.0 5.07e-01 100.0% 79.5%
4l8eA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.65 54.0 4.50e-01 98.3% 57.3%
4gzrC00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.65 57.0 5.62e-01 96.6% 95.1%
5z7qA00 1.20.1330.10 Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain 0.65 54.0 3.96e-01 100.0% 33.0%
4v1gA00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.63 54.0 4.86e-01 100.0% 75.3%
4fvmA06 1.10.287.690 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain 0.62 44.0 4.68e-01 79.3% 97.9%
1sg2A00 3.30.910.20 Alpha Beta › 2-Layer Sandwich › Protein Binding, DinI Protein; Chain A › Skp domain 0.62 47.0 3.79e-01 93.1% 40.4%
4gltA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.62 52.0 4.28e-01 100.0% 52.6%
ECOD (79)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3768858 192.29.1.1 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB_dom 0.91 76.0 6.26e-01 87.9% 54.7%
3853458 192.29.1.1 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB_dom 0.91 75.0 6.23e-01 87.9% 54.7%
3849547 4992.1.1.25 extended segments › RelB-like › RelB-like › RelB-like › SHCBP_N 0.90 79.0 6.53e-01 93.1% 57.9%
3264174 622.4.1.58 alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › PF26756 0.87 79.0 7.03e-01 98.3% 75.0%
3315495 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.87 77.0 6.60e-01 93.1% 65.9%
3400926 3758.1.1.45 alpha bundles › Bacterial hemolysins-like › Bacterial hemolysins › Bacterial hemolysins › Not3 0.87 75.0 5.84e-01 93.1% 48.7%
5067713 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.87 75.0 5.96e-01 93.1% 50.9%
4019922 611.4.1.0 alpha bundles › N-cbl like › PG0775 C-terminal domain-like › PG0775 C-terminal domain-like 0.86 75.0 5.19e-01 93.1% 32.0%
3878000 192.29.1.1 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB_dom 0.86 74.0 6.12e-01 91.4% 55.8%
4784166 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.85 71.0 6.68e-01 89.7% 75.7%
3298709 605.1.1.141 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › Rx_N 0.85 77.0 5.85e-01 98.3% 48.8%
4982498 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.85 78.0 4.38e-01 100.0% 9.6%
3318681 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.85 73.0 4.54e-01 93.1% 68.4%
3567670 192.5.1.14 alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1_TOCA 0.84 73.0 6.26e-01 94.8% 85.6%
5064482 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.84 77.0 5.44e-01 100.0% 35.8%
5071381 601.4.1.0 alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains 0.84 71.0 5.73e-01 91.4% 57.1%
3473220 5086.1.1.209 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › LIN9_C 0.84 77.0 6.04e-01 100.0% 67.8%
3180581 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.84 72.0 6.28e-01 93.1% 63.5%
4488200 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.83 75.0 5.99e-01 98.3% 64.2%
5069780 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.83 70.0 5.89e-01 91.4% 55.8%
3594486 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.83 76.0 5.84e-01 98.3% 49.2%
4086322 5086.1.1.205 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › PF30209 0.83 70.0 5.01e-01 93.1% 33.9%
3832457 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.83 72.0 4.64e-01 93.1% 23.8%
3593844 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.83 75.0 5.47e-01 100.0% 38.7%
3271624 2004.1.1.184 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.83 75.0 4.39e-01 98.3% 13.6%
3450053 3939.1.1.0 alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain 0.83 75.0 5.08e-01 98.3% 52.1%
3258925 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.82 73.0 6.82e-01 98.3% 80.0%
3902100 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.82 69.0 6.07e-01 93.1% 65.9%
None 0.82 69.0 4.38e-01 93.1% 20.2%
3556027 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.82 69.0 6.06e-01 93.1% 65.9%
3855461 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.82 69.0 6.05e-01 93.1% 65.9%
5002089 2004.1.1.144 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2 0.82 75.0 4.55e-01 98.3% 18.7%
5016953 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.81 74.0 5.23e-01 98.3% 66.9%
3710351 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.81 72.0 5.06e-01 98.3% 33.7%
3595108 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.81 71.0 6.20e-01 100.0% 73.3%
3491418 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.81 68.0 6.29e-01 93.1% 74.7%
3883526 4177.1.1.1 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH 0.81 69.0 4.27e-01 93.1% 18.4%
3487862 212.1.1.0 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like 0.81 68.0 4.45e-01 93.1% 23.3%
315449 192.8.1.2 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › Hanta_nucleocap 0.81 74.0 6.69e-01 100.0% 77.6%
2323907 212.1.1.24 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Morc6_S5 0.81 67.0 4.46e-01 93.1% 23.8%
5054861 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.80 74.0 4.28e-01 100.0% 12.7%
3344575 9.26.1.0 beta barrels › Lipocalins/Streptavidin 0.80 72.0 4.92e-01 100.0% 34.9%
3503444 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.80 69.0 5.91e-01 94.8% 62.2%
3215342 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.79 72.0 6.04e-01 100.0% 66.3%
5068463 3758.1.1.0 alpha bundles › Bacterial hemolysins-like › Bacterial hemolysins › Bacterial hemolysins 0.79 71.0 4.89e-01 98.3% 75.7%
3494796 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.79 67.0 4.27e-01 93.1% 20.4%
4784164 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.79 67.0 6.31e-01 93.1% 80.0%
4996728 174.1.1.0 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.79 68.0 5.37e-01 94.8% 48.7%
3231580 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.79 67.0 4.33e-01 93.1% 22.0%
3602521 4323.1.1.0 alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C 0.79 70.0 5.02e-01 98.3% 35.6%
None 0.78 69.0 4.72e-01 100.0% 35.0%
3744077 4177.1.1.1 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH 0.78 66.0 4.26e-01 93.1% 22.0%
3861615 150.1.1.190 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › SAP130_C 0.78 72.0 5.90e-01 100.0% 59.0%
4030237 192.7.1.0 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm 0.78 68.0 5.74e-01 100.0% 58.0%
437078 3713.1.1.1 alpha bundles › Small terminase central domain › Small terminase central domain › Small terminase central domain › DNA_Packaging 0.77 69.0 5.87e-01 98.3% 64.8%
3215082 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.77 65.0 4.94e-01 93.1% 41.5%
3907547 4177.1.1.10 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › GMIP-like_FCH 0.77 64.0 4.02e-01 93.1% 18.7%
4002563 192.8.1.303 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › Tmemb_cc2 0.77 68.0 4.74e-01 98.3% 35.6%
3928718 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.77 70.0 5.21e-01 100.0% 42.1%
3170937 4177.1.1.1 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH 0.77 64.0 4.09e-01 93.1% 20.4%
3884763 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.76 66.0 4.99e-01 100.0% 41.4%
3944950 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.76 66.0 6.42e-01 100.0% 86.2%
3663990 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.75 65.0 6.12e-01 98.3% 82.9%
3916497 632.8.1.17 alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › Rab_eff_C 0.74 65.0 5.09e-01 100.0% 47.2%
4935068 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.74 65.0 6.00e-01 98.3% 76.0%
3163896 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.74 61.0 4.12e-01 93.1% 25.2%
4174467 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.73 62.0 5.48e-01 100.0% 86.7%
3170876 192.7.1.30 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › CUX1_N 0.73 63.0 5.11e-01 100.0% 54.8%
3565979 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.72 61.0 4.15e-01 100.0% 27.8%
4947573 3755.1.1.0 alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related 0.70 60.0 3.83e-01 100.0% 19.7%
3194153 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.70 59.0 5.09e-01 98.3% 58.9%
3222544 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.70 58.0 4.61e-01 98.3% 53.8%
3519972 192.5.1.14 alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1_TOCA 0.69 63.0 5.40e-01 100.0% 75.6%
3261777 4177.1.1.8 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR_3 0.68 58.0 4.00e-01 100.0% 31.6%
3272451 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.68 58.0 4.61e-01 100.0% 48.0%
3732919 3755.3.1.46 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › She9_MDM33 0.68 58.0 4.10e-01 100.0% 31.6%
3755695 4177.1.1.8 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR_3 0.68 57.0 3.69e-01 100.0% 20.3%
3529707 4.1.1.453 beta barrels › SH3 › SH3 › SH3 › HR1_TOCA 0.66 55.0 4.81e-01 100.0% 71.6%
3349325 5086.1.1.135 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › DUF7615 0.62 50.0 4.67e-01 100.0% 75.0%
D2 medium residues 1-51
PDB
CATH (81)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1s7oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.92 67.0 5.10e-01 76.5% 38.1%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.91 70.0 6.66e-01 80.4% 79.3%
1ku3A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.91 68.0 6.35e-01 78.4% 73.8%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.91 71.0 6.87e-01 82.4% 83.9%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.90 67.0 6.20e-01 78.4% 65.1%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.90 70.0 6.86e-01 82.4% 94.4%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.89 66.0 6.20e-01 78.4% 67.2%
1gdtB03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.88 69.0 7.33e-01 82.4% 93.3%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 66.0 5.99e-01 78.4% 63.1%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 65.0 5.49e-01 78.4% 51.2%
6cc0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 69.0 6.14e-01 84.3% 68.6%
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 65.0 5.95e-01 78.4% 64.1%
3t0yA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 61.0 5.81e-01 74.5% 65.0%
3c57B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 63.0 6.44e-01 76.5% 79.6%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 69.0 6.05e-01 84.3% 66.7%
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.87 67.0 6.54e-01 80.4% 100.0%
4gvpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.87 69.0 4.43e-01 84.3% 23.3%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 69.0 6.21e-01 84.3% 71.6%
2lfwA01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.86 64.0 4.51e-01 78.4% 29.1%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 68.0 6.53e-01 84.3% 82.8%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 68.0 6.18e-01 84.3% 71.2%
1r71A01 1.10.10.730 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain 0.86 66.0 6.43e-01 82.4% 83.9%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 68.0 5.72e-01 84.3% 60.0%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 67.0 5.81e-01 84.3% 64.0%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 67.0 6.23e-01 84.3% 76.2%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 65.0 5.39e-01 82.4% 54.0%
1rp3G02 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.85 68.0 4.72e-01 84.3% 75.4%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.83 65.0 4.76e-01 84.3% 36.5%
2w7nA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.82 60.0 4.87e-01 78.4% 43.6%
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.82 63.0 6.17e-01 82.4% 90.9%
4nvsA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.82 56.0 3.93e-01 72.5% 54.2%
2jn6A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.82 63.0 5.22e-01 82.4% 52.9%
6sdkA01 1.10.10.2830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.81 58.0 4.68e-01 76.5% 42.3%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.81 65.0 4.73e-01 86.3% 38.2%
2elhA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 62.0 5.70e-01 82.4% 65.2%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.81 61.0 5.98e-01 82.4% 83.9%
2llkA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.81 58.0 6.34e-01 76.5% 100.0%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 64.0 5.34e-01 88.2% 56.2%
4a0zA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 68.0 6.50e-01 94.1% 89.8%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 64.0 5.32e-01 88.2% 63.6%
1a9xA04 1.10.1030.10 Mainly Alpha › Orthogonal Bundle › Carbamoyl Phosphate Synthetase; Chain A, domain 4 › Carbamoyl-phosphate synthetase, large subunit oligomerisation domain 0.78 63.0 4.49e-01 88.2% 31.3%
3iuoA00 1.10.10.1390 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP-dependent DNA helicase RecQ 0.78 68.0 5.32e-01 100.0% 57.8%
5y9sC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 65.0 5.53e-01 92.2% 63.4%
2cobA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.77 58.0 6.11e-01 82.4% 97.7%
2ethA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 62.0 4.60e-01 94.1% 39.7%
2auwB02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.76 52.0 4.64e-01 70.6% 52.9%
1jhgA00 1.10.1270.10 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like 0.76 59.0 4.68e-01 84.3% 45.5%
1biaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 62.0 5.81e-01 92.2% 82.8%
1lvaA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 61.0 5.77e-01 92.2% 90.3%
2dbbB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 58.0 5.73e-01 84.3% 89.1%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 56.0 5.68e-01 82.4% 96.0%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 59.0 5.84e-01 86.3% 90.7%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 52.0 4.80e-01 74.5% 61.5%
1g2hA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.74 57.0 5.44e-01 86.3% 77.0%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 60.0 5.61e-01 96.1% 85.1%
2m8gX00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.73 58.0 5.28e-01 88.2% 68.6%
3op9A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 50.0 4.50e-01 70.6% 54.4%
5fo5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 59.0 4.93e-01 90.2% 59.1%
1z05A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 59.0 5.35e-01 94.1% 88.9%
3cecA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 49.0 4.02e-01 70.6% 39.6%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 52.0 5.31e-01 80.4% 94.0%
1qb2A00 1.10.260.30 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › Signal recognition particle, SRP54 subunit, M-domain 0.71 56.0 4.33e-01 84.3% 53.8%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 58.0 5.47e-01 92.2% 90.5%
3e7lA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 57.0 5.43e-01 90.2% 78.3%
1ft9A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 57.0 4.97e-01 90.2% 81.0%
2lvsA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 57.0 5.84e-01 94.1% 100.0%
7pzaA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 57.0 4.79e-01 90.2% 79.1%
3f2gA00 3.30.450.410 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.69 56.0 3.76e-01 90.2% 24.4%
2o3fA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 56.0 4.77e-01 90.2% 61.0%
1u2wD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 53.0 4.35e-01 84.3% 45.7%
3i71B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 50.0 4.84e-01 78.4% 74.1%
2dt5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 58.0 5.18e-01 96.1% 79.5%
2r3sB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 53.0 4.67e-01 90.2% 63.0%
2di3A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 55.0 4.88e-01 94.1% 89.3%
2mqkA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.66 46.0 4.24e-01 72.5% 60.0%
3d0sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 51.0 4.50e-01 88.2% 81.2%
3cuoD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 54.0 4.48e-01 94.1% 57.4%
3g7dA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.63 47.0 3.93e-01 80.4% 100.0%
1s6lA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 49.0 4.94e-01 86.3% 86.5%
2ao9I01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.56 42.0 3.62e-01 84.3% 54.0%
4bxoA02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.56 42.0 3.93e-01 84.3% 71.6%
ECOD (96)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5011648 101.1.1.368 alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 0.94 79.0 8.03e-01 88.2% 96.0%
4946254 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.94 75.0 8.03e-01 84.3% 95.6%
4510105 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.93 68.0 7.71e-01 76.5% 97.5%
4987653 101.1.2.139 alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.93 70.0 7.43e-01 78.4% 91.1%
4963467 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.92 73.0 7.73e-01 84.3% 100.0%
4963466 101.1.1.368 alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 0.92 77.0 8.13e-01 88.2% 100.0%
3942922 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.92 69.0 5.90e-01 78.4% 53.3%
4987929 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.91 68.0 6.42e-01 78.4% 66.7%
3986842 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.91 68.0 6.00e-01 78.4% 61.4%
5028266 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.91 68.0 6.42e-01 78.4% 69.5%
5078377 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.91 68.0 6.88e-01 78.4% 80.0%
3090474 4020.1.1.0 a+b two layers › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes 0.91 68.0 4.75e-01 78.4% 29.0%
4031535 101.1.1.275 alpha arrays › HTH › HTH › Three-helical HTH › GerE 0.90 67.0 6.33e-01 78.4% 66.7%
3589359 101.1.1.68 alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 0.90 66.0 7.37e-01 76.5% 100.0%
3283589 101.1.1.368 alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 0.90 75.0 7.57e-01 88.2% 98.0%
3942514 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.90 72.0 7.33e-01 84.3% 86.0%
4990647 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.90 72.0 6.99e-01 84.3% 80.0%
3944309 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.90 71.0 7.17e-01 82.4% 92.0%
4992594 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.90 70.0 7.39e-01 82.4% 95.6%
4054648 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.90 70.0 6.84e-01 82.4% 81.8%
4927434 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.90 74.0 7.84e-01 86.3% 97.8%
3988145 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.90 65.0 6.61e-01 76.5% 80.0%
3590541 142.1.1.3 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.89 67.0 4.40e-01 78.4% 22.2%
4139052 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.89 66.0 5.71e-01 78.4% 53.3%
4010213 101.1.1.218 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_IS1 0.88 71.0 7.16e-01 84.3% 92.0%
4131887 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.88 71.0 5.95e-01 84.3% 60.8%
3947091 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.88 67.0 6.34e-01 80.4% 78.3%
4492035 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.88 70.0 6.20e-01 84.3% 68.6%
5018585 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.88 67.0 6.56e-01 80.4% 76.4%
3565285 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.88 68.0 6.23e-01 82.4% 67.7%
4578719 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.88 70.0 6.44e-01 84.3% 76.2%
3477795 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.88 64.0 6.73e-01 78.4% 86.7%
4010691 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.87 70.0 6.80e-01 84.3% 85.5%
3879118 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.87 68.0 6.62e-01 82.4% 78.2%
3945377 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.87 70.0 6.32e-01 84.3% 72.3%
4404485 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.87 69.0 6.50e-01 84.3% 80.0%
5062650 101.1.2.40 alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 0.87 67.0 4.90e-01 82.4% 34.4%
5058447 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.87 72.0 6.99e-01 88.2% 83.6%
4967740 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.87 70.0 6.80e-01 86.3% 83.6%
4008322 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.87 69.0 6.70e-01 84.3% 81.8%
4661582 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.87 69.0 5.20e-01 84.3% 43.6%
5024511 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.86 69.0 6.97e-01 84.3% 90.0%
3946608 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.86 69.0 6.08e-01 84.3% 68.6%
4008046 101.1.1.348 alpha arrays › HTH › HTH › Three-helical HTH › PF30461 0.86 66.0 6.66e-01 80.4% 84.0%
4030763 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.86 69.0 6.26e-01 84.3% 73.8%
3946793 101.1.1.259 alpha arrays › HTH › HTH › Three-helical HTH › Terminase_5 0.86 67.0 5.01e-01 82.4% 36.5%
3890615 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.86 71.0 7.16e-01 90.2% 90.0%
3943462 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.86 67.0 6.53e-01 82.4% 98.2%
5004840 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.86 71.0 6.01e-01 88.2% 58.7%
4945932 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.86 74.0 5.87e-01 92.2% 51.6%
3204806 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.86 66.0 7.01e-01 82.4% 97.8%
4937081 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.86 65.0 5.96e-01 80.4% 69.2%
3979166 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.86 70.0 6.17e-01 86.3% 72.9%
4007717 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.86 68.0 5.75e-01 84.3% 60.0%
4031756 101.1.2.645 alpha arrays › HTH › HTH › winged helix domain › HTH_40 0.86 69.0 5.73e-01 86.3% 57.6%
5004841 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 70.0 6.41e-01 88.2% 73.8%
3283074 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.85 68.0 5.59e-01 84.3% 56.5%
4976345 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.85 67.0 6.36e-01 84.3% 75.0%
4004247 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.85 67.0 5.71e-01 84.3% 60.0%
3588657 101.1.1.101 alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 0.85 68.0 6.95e-01 86.3% 100.0%
4952294 101.1.2.870 alpha arrays › HTH › HTH › winged helix domain › GerE 0.85 75.0 7.29e-01 94.1% 89.1%
3941764 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.85 68.0 6.19e-01 84.3% 73.8%
5025805 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 64.0 6.30e-01 82.4% 76.4%
3590303 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.84 67.0 5.82e-01 86.3% 61.3%
4162857 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.83 66.0 6.71e-01 84.3% 88.0%
3411416 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 66.0 7.04e-01 86.3% 100.0%
3933366 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.83 70.0 6.25e-01 92.2% 75.7%
4965811 101.1.1.559 alpha arrays › HTH › HTH › Three-helical HTH › DUF7858 0.83 66.0 6.26e-01 86.3% 75.0%
4952035 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.83 67.0 6.37e-01 88.2% 78.3%
3976103 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.83 65.0 5.96e-01 84.3% 73.8%
5043242 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.83 71.0 5.88e-01 92.2% 76.2%
3929142 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.83 69.0 6.58e-01 92.2% 85.0%
3590546 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.82 63.0 6.18e-01 82.4% 81.5%
1159643 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.82 63.0 5.60e-01 82.4% 70.4%
3929674 101.1.1.195 alpha arrays › HTH › HTH › Three-helical HTH › HTH_5 0.82 66.0 6.66e-01 88.2% 94.0%
4943227 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.82 63.0 6.60e-01 82.4% 95.6%
5027602 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 68.0 6.70e-01 92.2% 90.9%
5027601 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 71.0 6.77e-01 100.0% 86.7%
3583872 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 62.0 6.09e-01 84.3% 85.5%
4560931 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 57.0 5.03e-01 76.5% 54.7%
4927516 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 62.0 5.91e-01 84.3% 76.7%
3964284 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 71.0 6.72e-01 100.0% 93.3%
3931679 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 66.0 6.66e-01 92.2% 96.0%
4941829 101.1.2.93 alpha arrays › HTH › HTH › winged helix domain › HTH_Mga 0.79 67.0 5.05e-01 94.1% 42.5%
4596898 101.1.1.18 alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.79 62.0 5.38e-01 86.3% 57.5%
3243649 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.79 61.0 5.02e-01 84.3% 50.0%
4998155 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 61.0 6.21e-01 86.3% 92.0%
3509611 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 63.0 6.14e-01 88.2% 83.6%
3931341 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 66.0 5.57e-01 100.0% 62.2%
5028174 101.1.11.203 alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 0.76 64.0 6.25e-01 94.1% 87.3%
4994133 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.75 63.0 5.32e-01 94.1% 62.4%
4297623 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 60.0 6.34e-01 88.2% 100.0%
5045749 101.1.11.203 alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 0.74 64.0 6.00e-01 100.0% 87.7%
3391053 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 56.0 5.89e-01 84.3% 95.6%
3410877 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 55.0 5.05e-01 86.3% 64.3%
3446797 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.62 51.0 5.00e-01 88.2% 81.8%