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AB910392.1__BAO53071.1__KPP23_044__00045

Bact-Vir

AB910392.1__BAO53071.1__KPP23_044__00045

Identity

Accession:
AB910392 ↗
Kingdom:
phage

Quality

92.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pseudomonas_phage_KPP23

TaxID: 1462581

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-62
PDB
Domain cluster: rep: GQ403788.1__ADD25732.1__X__00035__D4-63
CATH (26)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2w0tA00 3.30.60.160 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.75 48.0 5.39e-01 94.8% 88.4%
6xi7B02 3.30.60.20 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.69 39.0 4.49e-01 86.2% 82.1%
4r2qA00 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.65 38.0 3.27e-01 81.0% 38.6%
5hvqC02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 41.0 3.55e-01 79.3% 68.4%
1r7jA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 42.0 3.68e-01 81.0% 65.6%
4cbvA02 2.40.50.1020 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › LytTr DNA-binding domain 0.56 40.0 3.35e-01 81.0% 78.8%
2fnaA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 41.0 3.92e-01 81.0% 83.6%
1bjaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 40.0 3.46e-01 77.6% 55.8%
2c60A01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.55 42.0 3.91e-01 87.9% 100.0%
2pw9C02 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.55 41.0 4.15e-01 86.2% 98.3%
2qenA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 41.0 3.89e-01 81.0% 85.7%
2qwwC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 39.0 3.04e-01 79.3% 40.6%
1gkuB06 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.54 41.0 3.11e-01 84.5% 70.5%
5zyrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 40.0 3.01e-01 81.0% 72.8%
6h9dA00 1.10.530.40 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.54 37.0 2.83e-01 72.4% 50.7%
1mw9X02 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.53 37.0 2.82e-01 77.6% 38.0%
3kfwX01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 38.0 3.59e-01 79.3% 77.3%
1lnwF01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 38.0 3.07e-01 79.3% 44.4%
5w1aB02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.52 32.0 3.10e-01 82.8% 53.8%
1epwA01 3.90.1240.10 Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" 0.52 38.0 2.34e-01 82.8% 49.3%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 39.0 3.11e-01 84.5% 96.9%
2fbkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 37.0 2.80e-01 79.3% 37.2%
1in4A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 37.0 3.51e-01 79.3% 80.8%
4yzgA00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.51 40.0 2.69e-01 96.6% 84.7%
6g1dA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 37.0 3.37e-01 81.0% 65.9%
2xjyA01 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.50 42.0 4.10e-01 93.1% 85.7%
ECOD (37)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3544665 931.1.1.0 ↗ few secondary structure elements › Metallothionein › Metallothionein › Metallothionein 0.89 53.0 3.53e-01 89.7% 18.4%
3290579 221.10.1.1 ↗ a+b two layers › beta-Grasp › FdhD/NarQ beta-grasp fold domain › FdhD/NarQ beta-grasp fold domain › FdhD-NarQ 0.64 48.0 4.52e-01 84.5% 93.3%
4033864 221.10.1.1 ↗ a+b two layers › beta-Grasp › FdhD/NarQ beta-grasp fold domain › FdhD/NarQ beta-grasp fold domain › FdhD-NarQ 0.61 45.0 4.42e-01 82.8% 93.8%
4985589 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.58 44.0 3.33e-01 84.5% 59.3%
3741065 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.57 41.0 3.54e-01 77.6% 66.3%
5079127 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.57 42.0 3.86e-01 79.3% 78.7%
5049119 221.10.1.1 ↗ a+b two layers › beta-Grasp › FdhD/NarQ beta-grasp fold domain › FdhD/NarQ beta-grasp fold domain › FdhD-NarQ 0.57 43.0 3.94e-01 87.9% 69.4%
5064168 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 41.0 3.67e-01 79.3% 72.9%
4963932 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 41.0 3.64e-01 79.3% 84.7%
5052967 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 41.0 2.95e-01 81.0% 33.0%
4961645 101.1.2.934 ↗ alpha arrays › HTH › HTH › winged helix domain › HVO_A0261_N 0.56 41.0 3.58e-01 79.3% 61.1%
2613 101.1.2.105 ↗ alpha arrays › HTH › HTH › winged helix domain › MotA_activ 0.56 40.0 3.46e-01 77.6% 55.8%
5035389 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 40.0 3.58e-01 77.6% 74.1%
3550852 101.1.2.86 ↗ alpha arrays › HTH › HTH › winged helix domain › SMC_Nse1 0.56 41.0 3.54e-01 82.8% 70.0%
3589675 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.55 30.0 3.22e-01 91.4% 60.0%
4395667 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 40.0 3.62e-01 77.6% 77.5%
3583377 386.1.1.1 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.55 35.0 3.47e-01 79.3% 56.9%
5032748 101.1.2.150 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.55 40.0 3.74e-01 79.3% 72.0%
5040315 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 39.0 3.50e-01 79.3% 68.9%
5015864 221.10.1.1 ↗ a+b two layers › beta-Grasp › FdhD/NarQ beta-grasp fold domain › FdhD/NarQ beta-grasp fold domain › FdhD-NarQ 0.54 40.0 3.72e-01 87.9% 67.1%
5082770 225.2.1.1 ↗ a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › Uncharacterized protein DIP2311 middle domain › Uncharacterized protein DIP2311 middle domain › HATPase_c_4 0.54 41.0 2.97e-01 84.5% 80.6%
5000448 101.1.2.19 ↗ alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.54 40.0 2.76e-01 81.0% 58.6%
3808197 101.1.2.396 ↗ alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 0.53 38.0 2.94e-01 77.6% 37.1%
5044919 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 39.0 3.68e-01 81.0% 78.1%
2496734 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 39.0 2.95e-01 81.0% 72.2%
4039721 101.1.2.652 ↗ alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C 0.53 38.0 2.97e-01 77.6% 45.2%
3607656 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.52 40.0 3.57e-01 91.4% 65.3%
5044560 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 39.0 2.69e-01 82.8% 30.9%
4940103 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 39.0 3.70e-01 81.0% 78.6%
3279376 101.1.2.88 ↗ alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.52 38.0 3.32e-01 81.0% 58.9%
5036278 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 36.0 3.65e-01 75.9% 85.0%
3694838 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 38.0 2.65e-01 81.0% 28.6%
5020992 101.1.2.728 ↗ alpha arrays › HTH › HTH › winged helix domain › PF31122 0.51 39.0 3.21e-01 82.8% 51.8%
5001395 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 38.0 3.70e-01 82.8% 90.8%
3785325 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.51 43.0 3.84e-01 100.0% 94.4%
4601008 101.1.2.728 ↗ alpha arrays › HTH › HTH › winged helix domain › PF31122 0.51 38.0 3.19e-01 82.8% 52.7%
5003768 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 37.0 3.49e-01 81.0% 82.7%