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AB910392.1__BAO53081.1__KPP23_054__00055

Bact-Vir

AB910392.1__BAO53081.1__KPP23_054__00055

Identity

Accession:
AB910392 ↗
Kingdom:
phage

Quality

89.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pseudomonas_phage_KPP23

TaxID: 1462581

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-143
PDB
Domain cluster: rep: MG018926.1__ATW57869.1__CNR33_00023__00023__D4-130
D2 high residues 147-216
PDB
Domain cluster: rep: MN536026.1__QIG56919.1__vBPaeSS2019XI_041__00041__D4-70
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF26833.1 best Phage_Mu_gp6 47.6 2.00e-12 95.7% 76.5%
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1mpyA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.65 46.0 3.67e-01 77.1% 35.6%
3lm4A01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.65 47.0 3.79e-01 80.0% 39.0%
3rheA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.65 44.0 3.73e-01 74.3% 43.0%
4pavB00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.63 42.0 3.40e-01 75.7% 36.6%
3wirA03 2.60.420.10 Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 0.60 41.0 4.21e-01 85.7% 73.9%
5xyib00 2.20.25.100 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Ribosomal protein S27 0.57 37.0 3.56e-01 74.3% 57.3%
1rtqA00 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.54 44.0 3.04e-01 98.6% 70.4%
3ld7A00 2.60.320.10 Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › N-utilization substance G protein NusG, insert domain 0.53 36.0 3.42e-01 72.9% 57.5%
3aimA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.52 40.0 2.79e-01 88.6% 39.9%
2nvmA00 3.30.310.110 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like 0.52 40.0 3.56e-01 84.3% 62.5%
6htnA01 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.51 41.0 3.38e-01 92.9% 54.7%
3f2gA00 3.30.450.410 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.50 38.0 2.79e-01 84.3% 62.9%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5048387 391.1.2.0 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related 0.69 47.0 5.00e-01 72.9% 100.0%
3921321 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.61 43.0 2.82e-01 74.3% 25.1%
3625308 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.58 39.0 3.32e-01 70.0% 57.6%
3929586 4184.1.1.0 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat 0.58 35.0 4.00e-01 94.3% 86.0%
3715477 220.1.1.92 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Mcp5_PH 0.56 39.0 3.09e-01 71.4% 55.6%
3781112 3561.1.1.1 ↗ a+b complex topology › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Med17 0.56 48.0 2.96e-01 100.0% 16.1%
3889979 913.1.1.0 ↗ few secondary structure elements › Hormone receptor domain (HRM, Pfam 02793) › Hormone receptor domain (HRM, Pfam 02793) › Hormone receptor domain (HRM, Pfam 02793) 0.54 38.0 4.06e-01 77.1% 96.4%
3211833 4351.1.1.1 ↗ alpha arrays › ATP12-like › ATP12-like › ATP12-like › ATP12 0.53 43.0 3.04e-01 91.4% 52.3%
None — 0.51 42.0 3.11e-01 100.0% 94.2%
3277842 4187.1.1.1 ↗ a+b two layers › NosL/MerB-like › NosL/MerB-like › NosL/MerB-like › MerB 0.51 38.0 4.04e-01 97.1% 96.7%