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AB910392.1__BAO53109.1__KPP23_082__00083
Bact-VirAB910392.1__BAO53109.1__KPP23_082__00083
Identity
- Accession:
- AB910392 ↗
- Kingdom:
- phage
Quality
87.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-120
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pp6A02 | 2.40.10.210 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Phage tail proteins (gpFII-like) | 0.81 | 44.0 | 5.82e-01 | 87.5% | 95.2% |
| 2kz4A00 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.76 | 66.0 | 6.60e-01 | 92.9% | 91.1% |
| 2w5eA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.69 | 39.0 | 4.84e-01 | 89.3% | 93.8% |
| 3gs9A01 | 6.20.110.10 | Special › Other non-globular › Thrombin, subunit H › | 0.68 | 46.0 | 5.36e-01 | 88.4% | 98.7% |
| 3k6yA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.65 | 41.0 | 4.41e-01 | 89.3% | 76.1% |
| 3f3bA00 | 2.40.10.370 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Protein of unknown function DUF3599 | 0.64 | 54.0 | 5.37e-01 | 90.2% | 92.2% |
| 3kyfA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.63 | 44.0 | 4.33e-01 | 90.2% | 68.4% |
| 6toaE01 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.62 | 51.0 | 5.44e-01 | 87.5% | 100.0% |
| 2kcaA00 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.59 | 48.0 | 4.92e-01 | 90.2% | 89.9% |
| 1ia9A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.58 | 45.0 | 4.11e-01 | 81.2% | 100.0% |
| 3fgeA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 51.0 | 4.42e-01 | 98.2% | 79.1% |
| 1flmA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 46.0 | 4.55e-01 | 89.3% | 84.4% |
| 1xqbA01 | 2.40.30.70 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YaeB-like | 0.54 | 35.0 | 3.61e-01 | 91.1% | 67.9% |
| 2wngA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 31.0 | 3.47e-01 | 95.5% | 72.4% |
| 3sz6A00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 36.0 | 3.59e-01 | 89.3% | 67.2% |
| 2fbjH02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 32.0 | 3.73e-01 | 99.1% | 91.8% |
| 3co8A01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.52 | 42.0 | 3.84e-01 | 98.2% | 66.2% |
| 3oc5A02 | 2.60.40.3240 | Mainly Beta › Sandwich › Immunoglobulin-like › Vibrio cholerae toxin co-regulated pilus biosynthesis protein F, C-terminal domain | 0.51 | 36.0 | 3.33e-01 | 88.4% | 58.2% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3502329 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.81 | 61.0 | 6.73e-01 | 77.7% | 98.9% |
| 119252 | 1.1.13.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join | 0.76 | 66.0 | 6.60e-01 | 92.9% | 91.1% |
| 4669352 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.75 | 65.0 | 6.62e-01 | 100.0% | 94.5% |
| 4034130 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.75 | 61.0 | 6.40e-01 | 92.9% | 96.0% |
| 3956293 | 1.1.5.75 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF4873 | 0.72 | 49.0 | 5.15e-01 | 89.3% | 77.0% |
| 3058418 | 1.1.13.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_attach | 0.72 | 59.0 | 6.14e-01 | 100.0% | 95.1% |
| 4988096 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.71 | 62.0 | 6.20e-01 | 92.9% | 96.5% |
| 3975275 | 1.1.13.15 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Gifsy-2 | 0.70 | 52.0 | 5.57e-01 | 100.0% | 89.5% |
| 4032900 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.70 | 59.0 | 6.09e-01 | 90.2% | 97.1% |
| 185291 | 1.1.13.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tailD1 | 0.68 | 46.0 | 5.34e-01 | 88.4% | 97.5% |
| 5038876 | 1.1.13.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_attach | 0.68 | 52.0 | 5.77e-01 | 90.2% | 100.0% |
| 4031786 | 1.1.13.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tailD1 | 0.68 | 50.0 | 5.62e-01 | 87.5% | 100.0% |
| 4032883 | 1.1.13.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join | 0.67 | 57.0 | 5.88e-01 | 92.9% | 99.0% |
| 2642578 | 1.1.13.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join | 0.62 | 54.0 | 5.44e-01 | 96.4% | 94.5% |
| 4259247 | 1.11.1.1 ↗ | beta barrels › cradle loop barrel › Photosystem II accessory factor Psb28 › Photosystem II accessory factor Psb28 › Psb28 | 0.62 | 42.0 | 4.41e-01 | 86.6% | 76.8% |
| 4879695 | 1.1.13.29 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › E217_gp28 | 0.62 | 57.0 | 5.40e-01 | 100.0% | 84.8% |
| 4620869 | 1.1.5.57 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Mycop_pep_DUF31 | 0.60 | 50.0 | 3.60e-01 | 92.9% | 41.5% |
| 4028467 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.59 | 42.0 | 3.15e-01 | 90.2% | 29.8% |
| 3843525 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.57 | 44.0 | 3.52e-01 | 89.3% | 40.9% |
| 3783835 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.56 | 46.0 | 3.51e-01 | 90.2% | 42.6% |
| 3511373 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.55 | 46.0 | 3.72e-01 | 90.2% | 47.9% |
| 3704634 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.55 | 45.0 | 3.47e-01 | 90.2% | 44.9% |
| 3562570 | 306.10.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › H1 domain of KCTD12 › H1 domain of KCTD12 | 0.55 | 42.0 | 3.90e-01 | 97.3% | 64.3% |
| 3275859 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 34.0 | 3.00e-01 | 78.6% | 44.2% |
| 3254671 | 206.1.1.13 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Alpha_kinase | 0.52 | 42.0 | 3.22e-01 | 84.8% | 55.2% |
| 3650249 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.52 | 43.0 | 3.39e-01 | 91.1% | 81.2% |
| 3444657 | 5.1.5.98 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › b-prop_At3g26010-like | 0.52 | 36.0 | 2.68e-01 | 71.4% | 99.7% |
| 3816873 | 12.3.1.2 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Cu_amine_oxid | 0.51 | 42.0 | 3.13e-01 | 89.3% | 57.9% |
| 3459723 | 4.1.1.173 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4216 | 0.51 | 38.0 | 3.36e-01 | 79.5% | 60.6% |
| 3682203 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.50 | 39.0 | 3.24e-01 | 91.1% | 45.4% |
| 3408511 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.50 | 43.0 | 3.47e-01 | 95.5% | 92.1% |
| 3752007 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.50 | 45.0 | 3.58e-01 | 100.0% | 90.6% |