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AB910392.1__BAO53115.1__KPP23_088__00089
Bact-VirAB910392.1__BAO53115.1__KPP23_088__00089
Identity
- Accession:
- AB910392 ↗
- Kingdom:
- phage
Quality
61.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-67
Domain cluster:
rep: MK613348.1__QBQ72775.1__CRP6_gp51__00051__D10-60
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kyuA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.64 | 41.0 | 3.80e-01 | 77.4% | 50.7% |
| 3pe0A03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.59 | 45.0 | 4.35e-01 | 86.8% | 78.1% |
| 1wemA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.55 | 35.0 | 3.18e-01 | 77.4% | 42.1% |
| 2okxA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 44.0 | 3.19e-01 | 100.0% | 97.4% |
| 2xhyD00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.53 | 42.0 | 2.54e-01 | 98.1% | 38.4% |
| 3oqgA00 | 3.40.1440.50 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › | 0.51 | 40.0 | 2.81e-01 | 86.8% | 63.1% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4057499 | 3681.1.1.0 ↗ | a+b complex topology › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit | 0.68 | 50.0 | 3.95e-01 | 81.1% | 40.9% |
| 4654615 | 325.1.7.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RNA_pol_Rpb2_6 | 0.68 | 50.0 | 3.28e-01 | 81.1% | 20.4% |
| 4244236 | 3681.1.1.0 ↗ | a+b complex topology › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit | 0.61 | 44.0 | 3.54e-01 | 81.1% | 38.2% |
| 3378958 | 109.4.1.1846 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30870 | 0.56 | 38.0 | 3.22e-01 | 71.7% | 74.5% |
| 4013273 | 3615.1.1.0 ↗ | alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain | 0.55 | 43.0 | 3.15e-01 | 92.5% | 55.4% |
| 4396206 | 275.1.1.0 ↗ | a+b two layers › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase | 0.54 | 39.0 | 3.86e-01 | 88.7% | 71.7% |
| 3712256 | 2011.1.1.6 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M20 | 0.53 | 38.0 | 2.71e-01 | 77.4% | 78.9% |
| 4963940 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.53 | 40.0 | 3.72e-01 | 84.9% | 75.7% |
| 5050596 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.52 | 37.0 | 3.46e-01 | 77.4% | 74.3% |
| 2770358 | 4033.1.1.3 ↗ | alpha arrays › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › HpaB_N | 0.52 | 42.0 | 3.18e-01 | 94.3% | 68.7% |
| 4966880 | 101.1.11.203 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 | 0.50 | 36.0 | 3.13e-01 | 81.1% | 47.4% |