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AB981170.1__BAP28159.1__X__00009
Bact-VirAB981170.1__BAP28159.1__X__00009
Identity
- Accession:
- AB981170 ↗
- Kingdom:
- phage
Quality
65.2
mean pLDDT
Taxonomy
Loebvirae›
Hofneiviricota›
Faserviricetes›
Tubulavirales›
Inoviridae›
Habenivirus›
Ralstonia_phage_RSMSuper
TaxID: 1530086
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 44-131_264-309
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ebtA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.75 | 33.0 | 3.38e-01 | 100.0% | 42.0% |
| 3cu3A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.69 | 32.0 | 2.99e-01 | 100.0% | 36.4% |
| 2imjD01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.68 | 32.0 | 3.13e-01 | 100.0% | 40.1% |
| 3ebyA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.67 | 34.0 | 3.24e-01 | 100.0% | 41.2% |
| 3f14A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.67 | 31.0 | 3.43e-01 | 97.8% | 51.8% |
| 3e99A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.66 | 32.0 | 3.13e-01 | 100.0% | 41.2% |
| 2f86B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.65 | 32.0 | 3.31e-01 | 100.0% | 48.1% |
| 3b8lA01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 33.0 | 3.24e-01 | 100.0% | 44.7% |
| 3cnxA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 30.0 | 3.06e-01 | 100.0% | 42.0% |
| 1wnhA01 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 32.0 | 3.60e-01 | 100.0% | 62.0% |
| 3gwrB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 31.0 | 3.17e-01 | 100.0% | 47.2% |
| 3gzrB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 33.0 | 3.32e-01 | 100.0% | 48.2% |
| 5bkaE01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 32.0 | 3.30e-01 | 100.0% | 49.2% |
| 4kz1A00 | 3.10.450.230 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein | 0.62 | 35.0 | 3.58e-01 | 100.0% | 54.8% |
| 3h51A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 31.0 | 3.05e-01 | 100.0% | 44.4% |
| 2cc3A00 | 3.10.450.230 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein | 0.60 | 35.0 | 3.48e-01 | 100.0% | 53.5% |
| 2jq5A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 29.0 | 2.99e-01 | 100.0% | 45.3% |
| 3hx8A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 32.0 | 3.32e-01 | 100.0% | 52.3% |
| 1h2iA01 | 3.30.390.80 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › DNA repair protein Rad52/59/22 | 0.59 | 34.0 | 3.30e-01 | 100.0% | 50.7% |
| 1uliB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 32.0 | 2.94e-01 | 100.0% | 39.0% |
| 3ff0A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 31.0 | 3.08e-01 | 100.0% | 46.8% |
| 3gp6A00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.58 | 29.0 | 2.84e-01 | 100.0% | 40.6% |
| 2rfrA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 30.0 | 2.94e-01 | 100.0% | 42.9% |
| 1fx3B00 | 3.10.420.10 | Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like | 0.55 | 35.0 | 3.37e-01 | 100.0% | 56.4% |
| 2ckfB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 32.0 | 2.95e-01 | 100.0% | 45.9% |
| 2r76A00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.53 | 33.0 | 3.39e-01 | 100.0% | 62.1% |
| 2og9A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.51 | 40.0 | 4.07e-01 | 98.5% | 84.6% |
| 1se8A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 34.0 | 3.69e-01 | 97.0% | 80.2% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3950026 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.78 | 37.0 | 3.80e-01 | 100.0% | 46.3% |
| 3465790 | 243.3.1.19 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 | 0.77 | 36.0 | 3.06e-01 | 100.0% | 28.4% |
| 3242736 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.73 | 35.0 | 3.53e-01 | 100.0% | 44.3% |
| 3930931 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.72 | 33.0 | 3.95e-01 | 98.5% | 63.3% |
| 3811744 | 243.1.1.49 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF2358 | 0.72 | 35.0 | 3.51e-01 | 100.0% | 45.0% |
| 3581448 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.71 | 35.0 | 3.81e-01 | 100.0% | 54.8% |
| 3961898 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.71 | 34.0 | 3.49e-01 | 100.0% | 46.9% |
| 3934854 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.70 | 36.0 | 3.51e-01 | 100.0% | 45.3% |
| 3458037 | 243.3.1.19 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 | 0.70 | 35.0 | 3.19e-01 | 99.3% | 36.6% |
| 3959230 | 243.1.1.77 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF29518 | 0.69 | 34.0 | 3.39e-01 | 100.0% | 44.3% |
| 3696424 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.69 | 36.0 | 3.47e-01 | 100.0% | 44.7% |
| 4942841 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.69 | 34.0 | 3.66e-01 | 97.0% | 53.9% |
| 3284019 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.69 | 34.0 | 3.47e-01 | 100.0% | 47.4% |
| 3951229 | 243.1.1.77 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF29518 | 0.68 | 34.0 | 3.33e-01 | 100.0% | 42.9% |
| 3278990 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.68 | 31.0 | 2.95e-01 | 96.3% | 36.1% |
| 4892175 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.68 | 33.0 | 3.34e-01 | 100.0% | 45.9% |
| 2552604 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.67 | 36.0 | 3.67e-01 | 100.0% | 51.9% |
| 3727921 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.67 | 35.0 | 3.51e-01 | 100.0% | 47.9% |
| 3962922 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.66 | 34.0 | 3.21e-01 | 100.0% | 40.0% |
| 3685395 | 243.1.1.10 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL | 0.66 | 32.0 | 3.32e-01 | 100.0% | 47.7% |
| 3787831 | 243.1.1.50 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › LIM_bind | 0.65 | 32.0 | 2.58e-01 | 100.0% | 23.6% |
| 4664562 | 243.1.1.1 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Ring_hydroxyl_B | 0.65 | 33.0 | 3.02e-01 | 100.0% | 37.1% |
| 6410 | 243.1.1.26 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 | 0.64 | 33.0 | 3.21e-01 | 100.0% | 43.8% |
| 3721835 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.64 | 34.0 | 3.26e-01 | 100.0% | 43.8% |
| 3479831 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.63 | 32.0 | 3.04e-01 | 100.0% | 38.8% |
| 3967916 | 243.1.1.25 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_3 | 0.63 | 32.0 | 3.11e-01 | 100.0% | 42.6% |
| 5026021 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.63 | 35.0 | 3.49e-01 | 100.0% | 50.7% |
| 5072383 | 243.1.1.26 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 | 0.62 | 32.0 | 3.14e-01 | 100.0% | 44.1% |
| 3848773 | 243.1.1.13 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › CaMKII_AD | 0.62 | 32.0 | 2.96e-01 | 100.0% | 38.8% |
| 3504070 | 243.1.1.13 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › CaMKII_AD | 0.62 | 32.0 | 3.19e-01 | 100.0% | 45.5% |
| 134734 | 243.1.1.13 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › CaMKII_AD | 0.61 | 31.0 | 3.05e-01 | 100.0% | 44.4% |
| 3287787 | 243.1.1.25 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_3 | 0.60 | 31.0 | 3.11e-01 | 100.0% | 45.7% |
| 3288819 | 243.1.1.25 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_3 | 0.60 | 31.0 | 3.02e-01 | 100.0% | 42.7% |
| 3962910 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.60 | 32.0 | 3.24e-01 | 100.0% | 49.6% |
| 5010039 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.59 | 33.0 | 3.25e-01 | 97.8% | 48.7% |
| 3969379 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.59 | 31.0 | 3.03e-01 | 100.0% | 44.0% |
| 169776 | 243.1.1.4 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PHZA_PHZB | 0.58 | 31.0 | 2.93e-01 | 100.0% | 40.7% |
| 2033779 | 243.1.1.28 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 | 0.58 | 31.0 | 3.26e-01 | 100.0% | 52.8% |
| 3395855 | 243.5.1.7 ↗ | a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region › AKAP28 | 0.57 | 31.0 | 3.23e-01 | 100.0% | 53.1% |
| 3725346 | 243.1.1.25 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_3 | 0.55 | 29.0 | 2.99e-01 | 100.0% | 50.0% |
| 3499326 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.54 | 29.0 | 2.28e-01 | 99.3% | 22.8% |
D2
high
residues 317-346_358-393
Domain cluster:
rep: P4__YP_009162337__Luffa_aphid-borne_yellows_virus__1462682__D47-78_80-129
CATH (81)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wznA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.82 | 64.0 | 6.86e-01 | 87.9% | 98.2% |
| 7t4dA01 | 2.70.240.10 | Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA | 0.79 | 67.0 | 4.31e-01 | 93.9% | 72.6% |
| 3bxoA02 | 2.20.130.10 | Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › CAC2371-like domains | 0.78 | 62.0 | 6.48e-01 | 92.4% | 94.9% |
| 7a0hA02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.78 | 70.0 | 5.10e-01 | 100.0% | 49.4% |
| 3aa0B02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.77 | 71.0 | 5.28e-01 | 100.0% | 43.2% |
| 4gf4A00 | 2.40.160.180 | Mainly Beta › Beta Barrel › Porin › Carbohydrate-selective porin OprB | 0.77 | 67.0 | 4.31e-01 | 97.0% | 30.1% |
| 1jkfA03 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.77 | 47.0 | 4.95e-01 | 74.2% | 68.3% |
| 6f1uK02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.77 | 69.0 | 5.26e-01 | 98.5% | 44.8% |
| 2ichA01 | 2.40.370.10 | Mainly Beta › Beta Barrel › AttH-like fold › AttH-like domain | 0.76 | 67.0 | 4.78e-01 | 95.5% | 35.2% |
| 4eg9A00 | 2.50.20.40 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.76 | 65.0 | 4.43e-01 | 98.5% | 27.3% |
| 1pu4A03 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.75 | 59.0 | 3.63e-01 | 86.4% | 84.5% |
| 3efmA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.75 | 66.0 | 3.97e-01 | 97.0% | 15.6% |
| 1vpbA01 | 3.30.2290.10 | Alpha Beta › 2-Layer Sandwich › PmbA/TldD fold › PmbA/TldD superfamily | 0.74 | 64.0 | 4.37e-01 | 95.5% | 76.0% |
| 1qj8A00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.74 | 63.0 | 4.82e-01 | 93.9% | 48.0% |
| 4aipC02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.73 | 64.0 | 3.74e-01 | 98.5% | 15.7% |
| 4n4rB00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.73 | 58.0 | 4.49e-01 | 87.9% | 60.3% |
| 4uv3E01 | 3.40.50.10610 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component | 0.73 | 65.0 | 4.60e-01 | 100.0% | 58.6% |
| 4ibnA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.73 | 59.0 | 4.23e-01 | 87.9% | 87.8% |
| 3d2lA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.72 | 56.0 | 5.74e-01 | 93.9% | 87.3% |
| 4epaA00 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.71 | 60.0 | 3.44e-01 | 92.4% | 15.7% |
| 2nutB03 | 2.60.40.1670 | Mainly Beta › Sandwich › Immunoglobulin-like › beta-sandwich domain of Sec23/24 | 0.71 | 50.0 | 3.89e-01 | 72.7% | 63.9% |
| 3dzmB00 | 2.40.160.70 | Mainly Beta › Beta Barrel › Porin › outer membrane protein from Thermus thermophilus HB27. | 0.70 | 62.0 | 4.35e-01 | 98.5% | 44.1% |
| 5tseA00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.69 | 56.0 | 4.49e-01 | 90.9% | 62.5% |
| 3irpX02 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.69 | 52.0 | 3.95e-01 | 78.8% | 79.7% |
| 6wwdB00 | 3.90.950.10 | Alpha Beta › Alpha-Beta Complex › Maf protein › | 0.69 | 53.0 | 3.85e-01 | 83.3% | 83.7% |
| 1zhxA03 | 2.40.160.120 | Mainly Beta › Beta Barrel › Porin › | 0.69 | 58.0 | 4.25e-01 | 97.0% | 35.1% |
| 3kenA00 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.69 | 58.0 | 3.63e-01 | 90.9% | 59.5% |
| 4kghA00 | 3.15.10.10 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 | 0.68 | 61.0 | 4.37e-01 | 100.0% | 39.9% |
| 3fruA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.68 | 57.0 | 4.17e-01 | 92.4% | 89.3% |
| 3qq2B00 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.68 | 57.0 | 3.83e-01 | 92.4% | 28.0% |
| 5eo6B00 | 3.40.1500.10 | Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › Coproporphyrinogen III oxidase, aerobic | 0.68 | 59.0 | 3.83e-01 | 100.0% | 66.8% |
| 1a6zA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.68 | 56.0 | 4.11e-01 | 92.4% | 89.4% |
| 3qtdA01 | 3.30.2290.10 | Alpha Beta › 2-Layer Sandwich › PmbA/TldD fold › PmbA/TldD superfamily | 0.67 | 57.0 | 3.96e-01 | 95.5% | 74.6% |
| 2r76A00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.67 | 55.0 | 4.46e-01 | 92.4% | 65.2% |
| 2ciuA00 | 3.10.450.320 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 | 0.67 | 56.0 | 4.58e-01 | 92.4% | 58.5% |
| 2pcsA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.65 | 53.0 | 4.04e-01 | 92.4% | 38.2% |
| 3qvsA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.65 | 47.0 | 4.08e-01 | 75.8% | 91.1% |
| 1vl4A01 | 3.30.2290.10 | Alpha Beta › 2-Layer Sandwich › PmbA/TldD fold › PmbA/TldD superfamily | 0.65 | 52.0 | 3.81e-01 | 92.4% | 78.5% |
| 5w8mA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.65 | 56.0 | 3.95e-01 | 93.9% | 98.5% |
| 4bnqB00 | 3.90.950.10 | Alpha Beta › Alpha-Beta Complex › Maf protein › | 0.65 | 53.0 | 3.90e-01 | 92.4% | 52.1% |
| 4ggtB00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.65 | 50.0 | 4.24e-01 | 95.5% | 50.9% |
| 3h51A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.65 | 57.0 | 4.41e-01 | 97.0% | 97.2% |
| 5irbA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 46.0 | 3.94e-01 | 75.8% | 66.3% |
| 6k96B02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.64 | 49.0 | 4.35e-01 | 83.3% | 92.8% |
| 1bxwA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.64 | 54.0 | 4.01e-01 | 93.9% | 45.9% |
| 3bb9B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 52.0 | 4.16e-01 | 87.9% | 47.2% |
| 4e1sA00 | 2.40.160.160 | Mainly Beta › Beta Barrel › Porin › Inverse autotransporter, beta-domain | 0.63 | 51.0 | 3.54e-01 | 97.0% | 24.8% |
| 7uzsX03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 46.0 | 3.82e-01 | 78.8% | 67.8% |
| 1gr0A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.62 | 47.0 | 4.38e-01 | 81.8% | 88.1% |
| 5ay6A01 | 2.60.98.20 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Flagellar hook protein FlgE | 0.62 | 52.0 | 3.89e-01 | 95.5% | 46.8% |
| 4z9cB00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.61 | 48.0 | 4.04e-01 | 86.4% | 78.3% |
| 4jdzA02 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 52.0 | 3.85e-01 | 92.4% | 65.5% |
| 4iiqC02 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.61 | 51.0 | 3.79e-01 | 93.9% | 89.3% |
| 2okmA00 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 43.0 | 3.34e-01 | 74.2% | 78.8% |
| 3cinA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.61 | 46.0 | 4.04e-01 | 83.3% | 98.1% |
| 2xsgB01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.60 | 50.0 | 3.29e-01 | 92.4% | 65.3% |
| 3f14A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 45.0 | 3.86e-01 | 86.4% | 49.1% |
| 1dpgA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.59 | 51.0 | 3.35e-01 | 100.0% | 22.0% |
| 5ig0A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 46.0 | 3.80e-01 | 87.9% | 49.6% |
| 4oocA00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.58 | 48.0 | 3.15e-01 | 89.4% | 36.2% |
| 4kz1A00 | 3.10.450.230 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein | 0.58 | 45.0 | 3.74e-01 | 90.9% | 76.3% |
| 1h2iA01 | 3.30.390.80 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › DNA repair protein Rad52/59/22 | 0.57 | 48.0 | 3.80e-01 | 97.0% | 48.0% |
| 3e99A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 46.0 | 3.64e-01 | 92.4% | 79.1% |
| 3hx8A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 46.0 | 3.72e-01 | 89.4% | 46.9% |
| 2ckfB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 45.0 | 3.47e-01 | 90.9% | 80.0% |
| 1uliB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 45.0 | 3.42e-01 | 90.9% | 77.4% |
| 1q6wG00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.56 | 46.0 | 3.72e-01 | 98.5% | 97.3% |
| 1xo8A00 | 2.60.40.1820 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 45.0 | 3.53e-01 | 90.9% | 68.9% |
| 3robA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 44.0 | 3.61e-01 | 90.9% | 51.1% |
| 1se8A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 44.0 | 3.70e-01 | 87.9% | 74.8% |
| 1c7hA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 43.0 | 3.66e-01 | 92.4% | 51.2% |
| 3gp6A00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.54 | 46.0 | 3.48e-01 | 98.5% | 40.0% |
| 3uc2A00 | 2.60.40.3340 | Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4426 | 0.54 | 43.0 | 3.44e-01 | 84.8% | 77.4% |
| 2f86B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 43.0 | 3.60e-01 | 93.9% | 84.5% |
| 3ec9A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 42.0 | 3.60e-01 | 97.0% | 52.7% |
| 1tp6A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 42.0 | 3.47e-01 | 92.4% | 46.8% |
| 6cxhA03 | 2.60.40.1580 | Mainly Beta › Sandwich › Immunoglobulin-like › Particulate methane monooxygenase, b subunit. Chain: A, domain 3 | 0.52 | 41.0 | 3.35e-01 | 89.4% | 85.3% |
| 4k3yC00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.52 | 44.0 | 2.80e-01 | 93.9% | 96.1% |
| 3er7B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 43.0 | 3.53e-01 | 92.4% | 50.4% |
| 4f8lA00 | 2.60.40.3590 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 43.0 | 3.56e-01 | 100.0% | 58.7% |
| 3fsdA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 41.0 | 3.47e-01 | 95.5% | 51.2% |
ECOD (78)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3258590 | 4210.1.1.0 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain | 0.87 | 72.0 | 6.29e-01 | 95.5% | 61.1% |
| 4025861 | 4051.1.1.1 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B | 0.86 | 78.0 | 5.66e-01 | 98.5% | 41.2% |
| 3808882 | 4051.1.1.1 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B | 0.84 | 76.0 | 5.43e-01 | 97.0% | 42.9% |
| 4025435 | 4051.1.1.2 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A | 0.83 | 76.0 | 5.32e-01 | 98.5% | 45.3% |
| 4998370 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.83 | 67.0 | 4.42e-01 | 95.5% | 23.3% |
| 4668983 | 4051.1.1.0 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz | 0.83 | 74.0 | 5.45e-01 | 97.0% | 41.9% |
| 2582184 | 5087.3.1.2 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C › MTP_lip_bd | 0.82 | 74.0 | 4.84e-01 | 100.0% | 34.9% |
| 5047908 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.81 | 60.0 | 3.72e-01 | 77.3% | 15.5% |
| 9395 | 2003.1.5.151 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23, Methyltransf_25 | 0.81 | 64.0 | 4.27e-01 | 89.4% | 23.0% |
| 4975736 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.81 | 59.0 | 3.68e-01 | 77.3% | 14.8% |
| 3570702 | 298.1.1.15 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Sacchrp_dh_C | 0.81 | 56.0 | 3.68e-01 | 72.7% | 90.6% |
| 2491331 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.81 | 71.0 | 5.17e-01 | 93.9% | 37.8% |
| 3515197 | 4051.1.1.2 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A | 0.81 | 73.0 | 5.30e-01 | 98.5% | 39.4% |
| 5055339 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.80 | 57.0 | 3.70e-01 | 77.3% | 18.1% |
| 5013876 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.80 | 66.0 | 4.40e-01 | 93.9% | 23.7% |
| 4980169 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.80 | 60.0 | 3.72e-01 | 78.8% | 87.5% |
| 3484227 | 4051.1.1.0 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz | 0.80 | 71.0 | 5.22e-01 | 98.5% | 39.4% |
| 3875809 | 4051.1.1.2 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A | 0.79 | 72.0 | 5.27e-01 | 98.5% | 39.4% |
| 3980178 | 7503.1.1.13 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › Lipoprotein_16 | 0.79 | 71.0 | 5.18e-01 | 98.5% | 58.8% |
| 3701390 | 11.8.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like | 0.79 | 71.0 | 4.72e-01 | 98.5% | 38.4% |
| 3326287 | 4051.1.1.1 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B | 0.79 | 69.0 | 5.58e-01 | 95.5% | 69.2% |
| 3273410 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.78 | 70.0 | 4.97e-01 | 97.0% | 34.6% |
| 3704753 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.78 | 71.0 | 4.76e-01 | 100.0% | 55.0% |
| 3360262 | 4051.1.1.2 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A | 0.78 | 69.0 | 4.92e-01 | 98.5% | 36.8% |
| 3980456 | 5084.8.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher | 0.77 | 69.0 | 4.15e-01 | 100.0% | 16.0% |
| 5035736 | 71.1.1.26 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › DUF3108 | 0.77 | 66.0 | 4.75e-01 | 90.9% | 36.5% |
| 3534691 | 4051.1.1.2 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A | 0.77 | 69.0 | 5.06e-01 | 98.5% | 39.4% |
| 3056279 | 4051.1.1.2 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A | 0.77 | 68.0 | 5.07e-01 | 98.5% | 39.9% |
| 3584211 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.76 | 68.0 | 5.24e-01 | 98.5% | 51.0% |
| 3236032 | 5084.5.3.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel | 0.75 | 66.0 | 3.83e-01 | 97.0% | 17.3% |
| 3782223 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.75 | 66.0 | 4.48e-01 | 97.0% | 28.0% |
| 3996943 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.75 | 69.0 | 5.25e-01 | 100.0% | 45.5% |
| 4367390 | 5084.8.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher | 0.75 | 66.0 | 3.98e-01 | 100.0% | 15.2% |
| 4642457 | 12.3.1.50 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › PF28395 | 0.74 | 67.0 | 4.25e-01 | 100.0% | 62.5% |
| 4158607 | 71.1.1.5 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › DUF576 | 0.74 | 63.0 | 4.31e-01 | 98.5% | 26.8% |
| 3598717 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.74 | 56.0 | 4.50e-01 | 78.8% | 65.8% |
| 4505397 | 5087.1.1.0 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-2 › Lipovitellin LV-2 | 0.73 | 66.0 | 4.44e-01 | 100.0% | 29.6% |
| 3981844 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.73 | 65.0 | 3.91e-01 | 100.0% | 17.8% |
| 3163625 | 7503.1.1.4 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › LptE | 0.73 | 59.0 | 4.58e-01 | 89.4% | 61.4% |
| 1760411 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.73 | 63.0 | 5.89e-01 | 97.0% | 77.8% |
| 4296505 | 5084.5.1.52 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › SlpA_C | 0.72 | 61.0 | 3.87e-01 | 95.5% | 20.0% |
| 4445572 | 4099.1.1.22 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › CENP-P | 0.72 | 62.0 | 4.99e-01 | 97.0% | 52.3% |
| 1720136 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.71 | 49.0 | 5.28e-01 | 71.2% | 92.6% |
| 4934746 | 512.1.1.2 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd | 0.70 | 59.0 | 4.71e-01 | 93.9% | 65.2% |
| 5079051 | 512.1.1.2 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd | 0.70 | 60.0 | 4.91e-01 | 93.9% | 71.7% |
| 3100974 | 5084.5.3.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel | 0.70 | 62.0 | 4.39e-01 | 100.0% | 45.2% |
| 5011691 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.70 | 57.0 | 4.74e-01 | 89.4% | 65.2% |
| 4960416 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.70 | 49.0 | 4.46e-01 | 74.2% | 87.6% |
| 3809120 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.69 | 58.0 | 4.61e-01 | 92.4% | 46.2% |
| 5043857 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.69 | 58.0 | 4.51e-01 | 90.9% | 75.0% |
| 3965708 | 5084.5.4.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM | 0.69 | 58.0 | 4.04e-01 | 98.5% | 32.1% |
| 3199282 | 2004.1.1.26 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin | 0.69 | 61.0 | 3.69e-01 | 98.5% | 53.0% |
| 3635453 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.69 | 53.0 | 4.24e-01 | 83.3% | 66.2% |
| 4180622 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.68 | 58.0 | 3.74e-01 | 95.5% | 21.5% |
| 3415714 | 79.1.1.23 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Chitin_bind_4 | 0.68 | 54.0 | 5.16e-01 | 90.9% | 74.7% |
| 2799871 | 5089.1.1.2 ↗ | beta complex topology › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › MACPF | 0.68 | 59.0 | 3.84e-01 | 100.0% | 68.7% |
| 3808862 | 243.1.1.2 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 | 0.67 | 58.0 | 4.52e-01 | 93.9% | 47.1% |
| 3964265 | 5084.1.1.43 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Autotransporter | 0.67 | 57.0 | 4.56e-01 | 100.0% | 68.3% |
| 3840054 | 5084.1.1.15 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP | 0.66 | 59.0 | 4.57e-01 | 97.0% | 56.4% |
| 3385471 | 4998.1.1.0 ↗ | beta sandwiches › Flagellar hook protein flgE D2 domain-like › Flagellar hook protein flgE D2 domain › Flagellar hook protein flgE D2 domain | 0.66 | 56.0 | 4.38e-01 | 95.5% | 43.4% |
| 4020443 | 243.1.1.2 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 | 0.65 | 54.0 | 4.42e-01 | 92.4% | 48.8% |
| 4966638 | 881.1.1.44 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF6517 | 0.65 | 59.0 | 4.16e-01 | 100.0% | 80.0% |
| 3838060 | 7503.1.1.4 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › LptE | 0.65 | 54.0 | 4.16e-01 | 97.0% | 55.2% |
| 3307679 | 243.1.1.2 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 | 0.64 | 58.0 | 4.53e-01 | 100.0% | 47.1% |
| 3957467 | 222.1.1.7 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › FcoT | 0.64 | 53.0 | 3.88e-01 | 90.9% | 74.3% |
| 4093339 | 5085.1.1.1 ↗ | a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP | 0.63 | 52.0 | 3.22e-01 | 92.4% | 59.1% |
| 6758 | 298.1.1.15 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Sacchrp_dh_C | 0.63 | 51.0 | 3.50e-01 | 92.4% | 97.0% |
| 3686127 | 298.1.1.15 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Sacchrp_dh_C | 0.63 | 51.0 | 3.45e-01 | 92.4% | 98.5% |
| 5054967 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 51.0 | 4.03e-01 | 97.0% | 51.3% |
| 3177367 | 330.1.1.4 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Rad52_Rad22 | 0.60 | 51.0 | 4.02e-01 | 100.0% | 63.9% |
| 3786132 | 330.1.1.4 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Rad52_Rad22 | 0.60 | 50.0 | 4.07e-01 | 100.0% | 55.9% |
| 3972404 | 327.16.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin | 0.59 | 49.0 | 3.64e-01 | 95.5% | 43.6% |
| 3181662 | 868.1.1.2 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA_triPase | 0.59 | 49.0 | 3.24e-01 | 97.0% | 55.9% |
| 3675696 | 5.1.4.288 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › APEH_N | 0.58 | 46.0 | 2.87e-01 | 93.9% | 13.5% |
| 3203571 | 9.13.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › DUF3237 | 0.57 | 47.0 | 3.78e-01 | 95.5% | 46.4% |
| 3317574 | 11.1.1.51 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LEA_2 | 0.55 | 47.0 | 3.73e-01 | 100.0% | 52.0% |
| 4929693 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 40.0 | 3.52e-01 | 90.9% | 78.3% |
| 3215506 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 41.0 | 3.49e-01 | 97.0% | 85.6% |
D3
medium
residues 132-263
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ybvA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.58 | 32.0 | 3.39e-01 | 73.5% | 59.5% |
| 3pquA02 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.55 | 41.0 | 3.74e-01 | 77.3% | 94.9% |
| 3holA02 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.54 | 40.0 | 3.74e-01 | 78.0% | 94.0% |
| 5bp3B00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.53 | 37.0 | 2.91e-01 | 70.5% | 82.3% |
| 3fssA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 29.0 | 3.49e-01 | 75.0% | 82.6% |
| 3v8uA02 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.51 | 37.0 | 3.40e-01 | 77.3% | 96.6% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3964905 | 5084.1.1.13 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HpuA | 0.55 | 41.0 | 3.19e-01 | 77.3% | 49.5% |
| 3506925 | 9.1.1.12 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › THAP4_heme-bd | 0.55 | 42.0 | 3.82e-01 | 80.3% | 98.3% |
| 3875861 | 5.1.4.146 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 38.0 | 2.59e-01 | 75.0% | 89.5% |