ACH96235.1_GrBNV_gp43-like_protein

Euk-Vir

Kallithea_virus

ACH96235.1_GrBNV_gp43-like_protein__YP_009345950__Kallithea_virus__1654582

Identity

61.7 mean pLDDT

Naldaviricetes› Lefavirales› Nudiviridae› Alphanudivirus› Kallithea_virus

TaxID: 1654582

Singleton — not in a non-trivial cluster

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 92-105_119-193_217-243_310-342

PDB

Domain cluster: representative

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3exmA01	2.40.380.10	Mainly Beta › Beta Barrel › FomD barrel-like fold › FomD-like	0.55	34.0	3.17e-01	85.9%	46.7%
1s3rA02	3.30.1040.20	Alpha Beta › 2-Layer Sandwich › Carboxypeptidase Inhibitor; Chain A ›	0.54	16.0	2.70e-01	79.2%	71.7%
4y6iA00	3.30.70.120	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.54	31.0	3.70e-01	79.2%	82.5%
4z9cB00	2.40.50.110	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) ›	0.50	28.0	3.12e-01	92.6%	67.8%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4955671	7089.1.1.0 ↗	a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD	0.53	25.0	3.23e-01	92.6%	78.8%
4929364	896.1.1.0 ↗	a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related	0.50	22.0	2.98e-01	90.6%	83.1%

D2 medium residues 194-216_244-309

PDB

Domain cluster: representative

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2ptfB02	1.20.58.290	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121.	0.59	30.0	3.69e-01	95.5%	77.2%
2pmeA01	3.30.930.10	Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2	0.58	45.0	3.11e-01	84.3%	91.4%
2cfoA04	1.10.8.70	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1	0.54	28.0	3.41e-01	91.0%	79.6%
2kgfA00	1.10.375.10	Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein	0.54	40.0	3.51e-01	79.8%	82.1%
2qgyB01	3.30.390.10	Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain	0.53	41.0	3.66e-01	100.0%	56.9%
5vbfA01	3.40.605.10	Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1	0.52	43.0	3.08e-01	93.3%	74.0%
4xchA00	3.30.1360.80	Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › S-ribosylhomocysteinase (LuxS)	0.51	44.0	3.79e-01	98.9%	92.6%
1m0wA02	3.30.470.20	Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain	0.51	31.0	2.98e-01	100.0%	50.9%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
None	—		0.58	45.0	3.05e-01	85.4%	88.9%
3593279	223.1.1.0 ↗	a+b three layers › Profilin-like › sensor domains › sensor domains	0.57	40.0	2.89e-01	73.0%	75.2%
3203646	323.1.1.3 ↗	a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding	0.54	42.0	3.04e-01	83.1%	69.8%
3601464	2004.1.1.0 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases	0.53	45.0	3.03e-01	98.9%	92.7%