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ACH96236.1_vp91-like_protein

Euk-Vir

Kallithea_virus

ACH96236.1_vp91-like_protein__YP_009345949__Kallithea_virus__1654582

Identity

Accession:
YP_009345949 ↗
Protein ID:
ACH96236.1_vp91-like_protein
Kingdom:
euk

Quality

65.9 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Nudiviridae› Alphanudivirus› Kallithea_virus

TaxID: 1654582

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 31-106
PDB
D2 high residues 624-691
PDB
D3 medium residues 281-336
PDB
Domain cluster: representative
CATH (33)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1w1hD00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.72 49.0 3.68e-01 71.4% 34.3%
2gzaA01 3.30.450.90 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.65 50.0 3.98e-01 82.1% 76.9%
4khbC00 2.30.29.210 Mainly Beta › Roll › PH-domain like › FACT complex subunit Spt16p/Cdc68p 0.62 48.0 3.99e-01 100.0% 46.2%
6ro0B01 3.10.40.10 Alpha Beta › Roll › Pertussis Toxin; Chain B, domain 1 › Aerolysin/Pertussis toxin (APT), N-terminal domain 0.62 44.0 3.89e-01 94.6% 50.0%
3kihC01 2.20.25.510 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.61 34.0 3.88e-01 89.3% 82.4%
6d92A01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.61 47.0 3.20e-01 89.3% 48.4%
5mmiG01 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.60 42.0 3.82e-01 91.1% 51.2%
1xovA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 41.0 3.91e-01 85.7% 59.7%
4ifdI01 2.40.50.880 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 43.0 3.86e-01 82.1% 94.2%
1nr0A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 44.0 2.85e-01 85.7% 67.1%
3igfA02 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 45.0 4.17e-01 91.1% 66.2%
3d3rA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 41.0 3.60e-01 85.7% 50.6%
1cukA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 45.0 4.28e-01 87.5% 87.9%
2dn8A01 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.57 44.0 4.14e-01 89.3% 83.3%
1bvsA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 44.0 4.27e-01 87.5% 87.7%
5gaeG01 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.56 45.0 4.06e-01 91.1% 70.4%
2z1cB00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 40.0 3.75e-01 87.5% 59.5%
1ixrA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 44.0 4.22e-01 87.5% 90.5%
2k8qA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 43.0 3.38e-01 92.9% 38.8%
2rdgA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 42.0 3.91e-01 85.7% 85.9%
7wrgB01 3.40.850.10 Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain 0.54 43.0 2.65e-01 87.5% 93.5%
2edgA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.54 36.0 2.90e-01 71.4% 88.5%
1ynjJ02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.53 42.0 4.12e-01 89.3% 80.6%
1z6hA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.53 42.0 3.89e-01 89.3% 83.3%
2z0lA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.53 40.0 2.55e-01 83.9% 30.2%
3go5A01 2.40.50.330 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 41.0 3.83e-01 85.7% 71.8%
3n6rA04 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.53 42.0 3.95e-01 89.3% 88.4%
3tzuA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.53 42.0 3.30e-01 91.1% 52.0%
4rcnB02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.52 40.0 3.71e-01 89.3% 77.9%
3hslX00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.51 39.0 2.58e-01 87.5% 31.7%
3fssA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 42.0 3.79e-01 98.2% 65.1%
7qu9A01 3.60.120.10 Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase 0.51 42.0 2.57e-01 100.0% 85.0%
1l1oF01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 38.0 3.04e-01 87.5% 62.6%
ECOD (35)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3391229 394.1.1.1 ↗ few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.77 60.0 6.29e-01 98.2% 94.0%
3408155 394.1.1.1 ↗ few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.75 57.0 5.61e-01 92.9% 76.7%
3618014 394.1.1.0 ↗ few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins 0.75 51.0 5.49e-01 96.4% 88.9%
3407263 394.1.1.1 ↗ few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.74 57.0 5.85e-01 98.2% 88.7%
3938491 394.1.1.0 ↗ few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins 0.73 52.0 5.69e-01 94.6% 97.7%
3394222 394.1.1.1 ↗ few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.73 53.0 5.61e-01 92.9% 88.0%
2568928 394.1.1.1 ↗ few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.72 56.0 5.60e-01 100.0% 84.2%
3395116 394.1.1.1 ↗ few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.72 55.0 5.63e-01 100.0% 85.5%
3501593 394.1.1.1 ↗ few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.70 51.0 5.33e-01 92.9% 88.0%
4269668 7000.1.1.0 ↗ alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS 0.66 38.0 3.87e-01 87.5% 58.2%
3872231 391.1.2.11 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC2L_2nd 0.64 41.0 4.20e-01 100.0% 67.3%
4015672 394.1.1.0 ↗ few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins 0.64 45.0 4.83e-01 100.0% 95.6%
4570827 12.3.1.68 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › PF25841 0.61 49.0 3.23e-01 91.1% 21.8%
4862778 1.1.2.1 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › RNA_pol_Rpb2_6 0.61 45.0 3.60e-01 89.3% 38.8%
None — 0.60 49.0 3.02e-01 91.1% 87.9%
4353811 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.59 47.0 4.44e-01 89.3% 81.4%
3514123 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.59 48.0 3.73e-01 91.1% 82.4%
3589916 325.1.7.1 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Biotin_lipoyl 0.58 47.0 4.17e-01 89.3% 80.7%
5011550 4.7.1.1 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.56 40.0 3.81e-01 87.5% 62.3%
4069150 2.1.1.14 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.56 44.0 4.24e-01 87.5% 87.7%
4241499 274.1.1.0 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.55 44.0 3.69e-01 91.1% 54.4%
4316390 2.1.1.14 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.55 43.0 4.17e-01 87.5% 92.3%
3949336 220.1.1.216 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Helicase_IV_N 0.54 44.0 3.68e-01 98.2% 81.8%
4666911 3239.1.1.1 ↗ alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 0.54 44.0 2.70e-01 89.3% 16.6%
4097524 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 42.0 3.99e-01 89.3% 88.6%
3847839 6129.1.1.0 ↗ beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family 0.53 43.0 2.90e-01 96.4% 67.9%
3879797 391.1.2.1 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC 0.52 44.0 4.51e-01 100.0% 94.5%
3465888 325.1.7.1 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Biotin_lipoyl 0.52 41.0 3.62e-01 89.3% 71.8%
3871990 391.1.2.1 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC 0.52 46.0 4.63e-01 100.0% 98.2%
4949986 220.1.1.219 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch 0.52 40.0 3.46e-01 98.2% 92.7%
3251857 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.51 40.0 3.26e-01 98.2% 68.1%
3872745 319.1.1.5 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PIH1_CS 0.51 41.0 3.39e-01 91.1% 48.6%
1318709 59.1.4.1 ↗ beta complex topology › triple barrel › triple barrel › TFIID subunits TAF1-TAF7 › TAFII55_N 0.51 42.0 2.72e-01 89.3% 23.6%
3908573 356.1.1.3 ↗ few secondary structure elements › PMP inhibitors › PMP inhibitors › PMP inhibitors › VWC2L_2nd 0.50 43.0 4.35e-01 100.0% 96.4%
3380051 325.1.7.4 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › GCV_H 0.50 38.0 3.07e-01 91.1% 49.3%
D4 medium residues 343-474
PDB
Domain cluster: rep: vp91_protein__YP_007250490__Thysanoplusia_orichalcea_nucleopolyhedrovirus__101850__D328-447
D5 medium residues 477-613
PDB