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ACH96247.1_GrBNV_gp34-like_protein
Euk-VirKallithea_virus
ACH96247.1_GrBNV_gp34-like_protein__YP_009345939__Kallithea_virus__1654582
Identity
- Accession:
- YP_009345939 ↗
- Protein ID:
- ACH96247.1_GrBNV_gp34-like_protein
- Kingdom:
- euk
Quality
73.2
mean pLDDT
Cluster
View cluster (16 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 57-222
Domain cluster:
rep: orf32_gene_product__YP_004956780__Helicoverpa_zea_nudivirus_2__1128424__D56-285
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5uivA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 58.0 | 5.21e-01 | 93.4% | 72.0% |
| 6ln3A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 53.0 | 4.92e-01 | 93.4% | 72.3% |
| 3a4lB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 45.0 | 4.42e-01 | 93.4% | 69.7% |
| 4ttrA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 47.0 | 4.44e-01 | 92.8% | 75.1% |
| 2lndA00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 30.0 | 3.55e-01 | 83.1% | 79.5% |
| 5b51A01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.53 | 35.0 | 3.88e-01 | 87.3% | 83.3% |
| 5gizA01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.52 | 33.0 | 3.64e-01 | 83.1% | 80.6% |
| 4m7oA01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.52 | 32.0 | 3.59e-01 | 83.1% | 80.0% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4281154 | 2004.1.1.191 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_17 | 0.64 | 49.0 | 4.74e-01 | 95.2% | 71.4% |
| 4214511 | 2004.1.1.106 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RapZ-like_N | 0.63 | 43.0 | 4.36e-01 | 93.4% | 69.1% |
| 5057727 | 2004.1.1.202 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_28 | 0.63 | 50.0 | 4.83e-01 | 92.2% | 74.6% |
| 3681103 | 2004.1.1.192 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_18 | 0.60 | 53.0 | 4.58e-01 | 93.4% | 62.8% |
| 3489994 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 40.0 | 3.96e-01 | 92.8% | 68.0% |
| 4956540 | 7597.1.1.0 ↗ | a/b three-layered sandwiches › Endolysin C-terminal domain › Endolysin C-terminal domain › Endolysin C-terminal domain | 0.55 | 27.0 | 3.63e-01 | 78.9% | 88.2% |
| 3928709 | 7529.1.1.1 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro | 0.53 | 36.0 | 3.63e-01 | 84.9% | 65.7% |
| 4000367 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 41.0 | 3.72e-01 | 81.9% | 74.8% |
| 3875685 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 46.0 | 3.85e-01 | 93.4% | 75.6% |
| 3392437 | 109.4.1.81 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › eIF-3c_N | 0.52 | 33.0 | 3.28e-01 | 73.5% | 57.8% |
| 3387874 | 2007.1.14.5 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Peripla_BP_2 | 0.51 | 31.0 | 3.47e-01 | 82.5% | 76.2% |
| 3589002 | 2007.1.2.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ABC_sub_bind | 0.51 | 35.0 | 3.57e-01 | 85.5% | 71.9% |
| 3997843 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.51 | 44.0 | 3.78e-01 | 94.6% | 72.1% |
| 5000894 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.50 | 45.0 | 3.43e-01 | 97.6% | 94.4% |
| 3926272 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.50 | 39.0 | 3.89e-01 | 80.7% | 87.6% |
D2
medium
residues 223-278
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1qsmD00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.64 | 45.0 | 3.29e-01 | 73.2% | 38.8% |
| 3draA00 | 1.25.40.120 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Protein prenylyltransferase | 0.60 | 42.0 | 2.68e-01 | 75.0% | 23.5% |
| 2reoA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 46.0 | 3.24e-01 | 96.4% | 63.3% |