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ACH96251.1_dnalig-like_protein
Euk-VirKallithea_virus
ACH96251.1_dnalig-like_protein__YP_009345935__Kallithea_virus__1654582
Identity
- Accession:
- YP_009345935 ↗
- Protein ID:
- ACH96251.1_dnalig-like_protein
- Kingdom:
- euk
Quality
76.5
mean pLDDT
Cluster
View cluster (52 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 57-239
Domain cluster:
rep: Salt_Pond_R1_B_H2O_MG_scaffold_1_prodigal-single.1__X__X__00295__D161-347
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01068.27 best | DNA_ligase_A_M | 86.2 | 3.60e-24 | 97.3% | 94.1% |
| PF09414.16 | RNA_ligase | 29.2 | 1.40e-06 | 90.2% | 99.4% |
D2
high
residues 242-371
Domain cluster:
rep: MK256384.1__QBA85097.1__X__00002__D37-130
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6nhxA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.71 | 60.0 | 6.33e-01 | 99.2% | 99.1% |
| 2k5nA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 36.0 | 4.69e-01 | 92.3% | 90.5% |
| 4pqxA01 | 2.40.50.500 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain | 0.68 | 39.0 | 4.92e-01 | 92.3% | 100.0% |
| 1a0iA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 49.0 | 5.54e-01 | 91.5% | 99.0% |
| 3k6oA01 | 2.40.50.500 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain | 0.66 | 37.0 | 4.75e-01 | 93.8% | 98.6% |
| 2hqlA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 44.0 | 5.12e-01 | 91.5% | 97.8% |
| 1v1pB02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.65 | 38.0 | 4.76e-01 | 94.6% | 100.0% |
| 1an8A02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.65 | 38.0 | 4.77e-01 | 92.3% | 100.0% |
| 3w1gA03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 60.0 | 5.85e-01 | 100.0% | 96.5% |
| 2q2tA03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 50.0 | 5.49e-01 | 91.5% | 98.1% |
| 2ba0A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 39.0 | 4.60e-01 | 93.1% | 90.8% |
| 4pmwA02 | 2.40.50.700 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.63 | 38.0 | 4.70e-01 | 95.4% | 98.7% |
| 2ja9A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 40.0 | 4.85e-01 | 92.3% | 100.0% |
| 1ue6D00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 44.0 | 4.85e-01 | 94.6% | 92.3% |
| 3ntkB01 | 2.40.50.790 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.60 | 36.0 | 4.27e-01 | 92.3% | 88.4% |
| 1kxlA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 52.0 | 4.62e-01 | 96.2% | 84.0% |
| 3fhwA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 42.0 | 4.71e-01 | 94.6% | 94.9% |
| 4qclA01 | 2.40.50.730 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.57 | 37.0 | 4.47e-01 | 96.2% | 100.0% |
| 1iowA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.56 | 36.0 | 3.52e-01 | 90.0% | 57.0% |
| 2pn1A03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.53 | 31.0 | 3.29e-01 | 90.8% | 62.5% |
| 6dgiA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.52 | 36.0 | 3.51e-01 | 90.0% | 63.9% |
| 1e4eB01 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.51 | 35.0 | 3.38e-01 | 90.0% | 60.3% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3386087 | 2.1.1.65 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB_2 | 0.84 | 51.0 | 6.54e-01 | 93.1% | 100.0% |
| 4645509 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.81 | 52.0 | 6.43e-01 | 91.5% | 100.0% |
| 1406655 | 2.1.1.65 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB_2 | 0.80 | 50.0 | 6.22e-01 | 94.6% | 100.0% |
| 3717380 | 2.1.1.13 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-5a | 0.77 | 47.0 | 5.86e-01 | 94.6% | 98.8% |
| 3598808 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.76 | 52.0 | 6.01e-01 | 96.2% | 94.7% |
| 3944434 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.75 | 50.0 | 5.78e-01 | 93.1% | 92.6% |
| 4947393 | 2.1.1.31 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_A_C | 0.73 | 62.0 | 6.59e-01 | 97.7% | 100.0% |
| 5076594 | 2.1.1.31 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_A_C | 0.72 | 63.0 | 6.47e-01 | 98.5% | 95.2% |
| 2759388 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.71 | 38.0 | 5.07e-01 | 94.6% | 95.8% |
| 3701347 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.71 | 50.0 | 3.59e-01 | 100.0% | 27.4% |
| 4992393 | 2.1.1.31 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_A_C | 0.71 | 63.0 | 6.41e-01 | 100.0% | 95.3% |
| 1170324 | 2.1.1.31 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_A_C | 0.70 | 58.0 | 6.20e-01 | 98.5% | 100.0% |
| 3968581 | 2.1.1.31 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_A_C | 0.70 | 63.0 | 6.44e-01 | 100.0% | 99.2% |
| 3595472 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 50.0 | 4.92e-01 | 100.0% | 69.3% |
| 3228963 | 2.1.1.311 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF31223 | 0.69 | 44.0 | 4.92e-01 | 94.6% | 82.0% |
| 3621122 | 2.1.1.31 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_A_C | 0.68 | 64.0 | 6.30e-01 | 100.0% | 94.8% |
| 4509258 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 61.0 | 5.60e-01 | 98.5% | 98.8% |
| 3487242 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 32.0 | 4.46e-01 | 87.7% | 93.7% |
| 3397967 | 2.1.1.31 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_A_C | 0.67 | 62.0 | 5.81e-01 | 98.5% | 91.0% |
| 372 | 2.1.1.91 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_C | 0.66 | 49.0 | 5.54e-01 | 91.5% | 99.0% |
| 4401930 | 2.1.1.31 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_A_C | 0.66 | 58.0 | 5.85e-01 | 98.5% | 93.0% |
| 4113274 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 38.0 | 4.81e-01 | 91.5% | 97.3% |
| 4180017 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 62.0 | 5.57e-01 | 100.0% | 91.8% |
| 4001812 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 62.0 | 6.03e-01 | 100.0% | 94.3% |
| 4101945 | 2.1.1.31 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_A_C | 0.65 | 61.0 | 5.39e-01 | 100.0% | 91.1% |
| 3281892 | 2.1.1.31 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_A_C | 0.64 | 60.0 | 5.70e-01 | 99.2% | 94.7% |
| 2831772 | 2.1.1.65 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB_2 | 0.61 | 50.0 | 5.34e-01 | 93.1% | 99.1% |
| 3606816 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 37.0 | 3.95e-01 | 92.3% | 70.9% |
| 3612950 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 52.0 | 5.40e-01 | 94.6% | 100.0% |
| 3614083 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 44.0 | 4.43e-01 | 93.8% | 76.7% |
| 3506791 | 2.1.1.69 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RMI2 | 0.59 | 44.0 | 4.27e-01 | 99.2% | 69.7% |
| 3275390 | 2.1.1.105 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › NMD3_OB | 0.58 | 41.0 | 4.29e-01 | 94.6% | 79.2% |
| 3936025 | 2.1.1.25 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_pol_B_exo1 | 0.56 | 40.0 | 4.48e-01 | 92.3% | 97.0% |
| 3484545 | 2.3.1.0 ↗ | beta barrels › OB-fold › TIMP-like › TIMP-like | 0.55 | 40.0 | 4.25e-01 | 96.9% | 86.1% |
| 3701262 | 2.1.1.225 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30388 | 0.54 | 46.0 | 4.62e-01 | 94.6% | 90.0% |