ACSJ01000017.1EES90327.1CLG_B2283__00015

Bact-Vir

ACSJ01000017.1__EES90327.1__CLG_B2283__00015

Identity

83.7 mean pLDDT

Clostridium_phage_D-1873

TaxID: 658056

View cluster (11 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-139

PDB

Domain cluster: rep: SRR1747065_scaffold_28_prodigal-single.1__X__X__00021__D5-141

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1p6rA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.53	33.0	3.89e-01	84.3%	95.1%
3ihuA02	1.20.120.530	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like	0.53	40.0	3.93e-01	87.4%	74.1%
4fqgB03	1.10.10.440	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain	0.51	28.0	3.57e-01	87.4%	100.0%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5028765	601.7.1.0 ↗	alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain	0.56	41.0	3.93e-01	77.2%	94.0%
3859783	5001.1.1.0 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like	0.50	38.0	2.91e-01	79.5%	81.6%

D2 high residues 155-231

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF27211.1 best	YomV_2nd	61.6	7.20e-17	77.9%	74.3%

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2cqnA00	1.10.10.440	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain	0.64	40.0	4.02e-01	87.0%	63.6%
2a3qA00	1.10.287.1080	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like	0.61	40.0	3.53e-01	85.7%	45.1%
3vkgA15	1.10.8.1220	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 ›	0.58	41.0	3.94e-01	100.0%	61.7%
4i0xG00	1.10.287.1060	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like	0.55	38.0	4.04e-01	97.4%	80.9%
4qiwB04	3.90.1110.10	Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2	0.54	45.0	3.59e-01	94.8%	50.9%
2hujA00	1.20.120.440	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like	0.53	39.0	3.36e-01	79.2%	100.0%
4aihF00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.50	42.0	3.72e-01	93.5%	94.8%

ECOD (7)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4540864	603.1.1.0 ↗	alpha bundles › STAT-like › t-snare proteins › t-snare proteins	0.65	44.0	3.08e-01	70.1%	44.7%
5007853	101.1.2.192 ↗	alpha arrays › HTH › HTH › winged helix domain › B_lactamase-like_C	0.64	38.0	4.07e-01	80.5%	68.1%
3627947	190.1.1.2 ↗	alpha arrays › HMG-box-like › HMG-box › HMG-box › CHDNT	0.62	38.0	3.91e-01	87.0%	64.0%
3471257	190.1.1.1 ↗	alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box	0.61	54.0	4.81e-01	100.0%	80.0%
5030587	101.1.10.0 ↗	alpha arrays › HTH › HTH › Cyclin-like	0.57	37.0	3.43e-01	98.7%	51.0%
4580634	3922.1.1.147 ↗	alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › TPR	0.52	45.0	3.46e-01	94.8%	65.7%
2337282	6170.1.1.1 ↗	alpha bundles › Kv7 proximal C-terminal Domain › Kv7 proximal C-terminal Domain › Kv7 proximal C-terminal Domain › KCNQ_channel	0.52	42.0	4.07e-01	100.0%	78.7%