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AF069308.1__AUM59811.1__HK022_35__00033

Bact-Vir

AF069308.1__AUM59811.1__HK022_35__00033

Identity

Accession:
AF069308 ↗
Kingdom:
phage

Quality

83.0 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 53-110
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04448.18 best DUF551 59.3 7.80e-16 100.0% 88.2%
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6euaA01 3.90.215.10 Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 0.66 58.0 4.38e-01 100.0% 68.3%
4cshA00 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.64 56.0 4.10e-01 100.0% 42.7%
4lduA03 2.30.30.1040 Mainly Beta › Roll › SH3 type barrels. › 0.64 49.0 4.74e-01 86.2% 100.0%
2avwD01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.64 55.0 4.20e-01 100.0% 73.0%
2imlA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.63 54.0 4.31e-01 93.1% 58.4%
2gefA01 2.30.42.30 Mainly Beta › Roll › Pdz3 Domain › 0.63 48.0 3.93e-01 84.5% 85.7%
4qv2A02 2.40.30.120 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses 0.63 54.0 4.37e-01 100.0% 89.8%
3m9qA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 53.0 4.96e-01 94.8% 94.4%
2gpjA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.62 54.0 4.59e-01 100.0% 99.0%
4qqgG00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 50.0 4.69e-01 91.4% 86.1%
4yhbA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.61 52.0 4.13e-01 100.0% 87.6%
6wo0A01 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.61 46.0 3.19e-01 84.5% 34.7%
2lccA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 48.0 4.46e-01 87.9% 76.3%
5zwzA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 53.0 5.01e-01 98.3% 100.0%
2d9xA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 46.0 3.82e-01 86.2% 77.3%
1wv4B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 49.0 3.61e-01 91.4% 48.1%
5hmaA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.59 49.0 4.16e-01 98.3% 65.4%
2vrsA03 2.60.90.40 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › 0.59 47.0 3.57e-01 86.2% 46.2%
4odbA00 2.60.90.20 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Virus attachment protein , globular domain 0.59 45.0 3.31e-01 84.5% 36.4%
4ic5A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.59 48.0 4.12e-01 98.3% 66.3%
2mc2A00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.58 45.0 3.23e-01 91.4% 100.0%
2kcjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 44.0 3.67e-01 84.5% 75.9%
3lq6A02 2.40.30.120 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses 0.58 49.0 4.07e-01 100.0% 98.2%
3otpA01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.58 48.0 3.43e-01 100.0% 72.4%
6mv2A02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.58 47.0 4.07e-01 100.0% 100.0%
4kbxA01 2.40.37.30 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › 0.58 49.0 3.37e-01 100.0% 79.5%
1ci0B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 48.0 3.31e-01 93.1% 37.7%
2bhgA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.57 48.0 4.07e-01 98.3% 64.7%
7oc3A01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 50.0 4.34e-01 100.0% 77.2%
3ef2A02 3.30.460.70 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › 0.57 48.0 3.75e-01 100.0% 84.8%
2as9B01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.57 48.0 4.13e-01 100.0% 57.4%
4kktA02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.57 48.0 4.06e-01 100.0% 91.4%
5cxxB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.56 40.0 2.64e-01 75.9% 42.3%
2jeuA02 2.170.200.10 Mainly Beta › Beta Complex › Regulatory Protein E2; Chain: A; Domain 2 › Papillomavirus E2 early protein domain 0.56 41.0 3.44e-01 79.3% 79.2%
1wczA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.55 47.0 3.84e-01 100.0% 53.0%
2rceA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.55 45.0 3.87e-01 100.0% 58.5%
7ylrA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.55 46.0 3.86e-01 98.3% 100.0%
3e1sA04 2.30.30.940 Mainly Beta › Roll › SH3 type barrels. › 0.55 46.0 4.43e-01 98.3% 89.9%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 41.0 4.06e-01 89.7% 79.7%
1cqxA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.54 44.0 3.77e-01 100.0% 92.8%
4r8tB02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.54 42.0 3.99e-01 93.1% 78.1%
3cp7A01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.54 39.0 3.26e-01 81.0% 48.6%
1oxxK02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 32.0 3.57e-01 94.8% 75.6%
1wi1A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 39.0 3.32e-01 84.5% 76.6%
4k4kA01 2.60.40.2620 Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrillin-like 0.53 42.0 3.45e-01 96.6% 52.8%
5dl8A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.53 40.0 2.44e-01 84.5% 95.9%
2g2sA00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.51 37.0 3.63e-01 79.3% 92.2%
4qfwA00 2.40.160.210 Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain 0.51 38.0 2.57e-01 84.5% 73.8%
1z94B00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.50 38.0 3.04e-01 89.7% 74.8%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4949773 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.67 56.0 4.15e-01 91.4% 39.3%
3411714 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 53.0 5.01e-01 87.9% 74.3%
3593607 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 52.0 5.34e-01 86.2% 100.0%
5034832 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 54.0 5.08e-01 91.4% 97.1%
3689576 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 57.0 4.20e-01 100.0% 57.4%
3185321 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.64 54.0 4.96e-01 93.1% 90.7%
4969376 4.1.1.30 beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.64 52.0 4.17e-01 91.4% 80.5%
5006014 1.1.5.17 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.64 54.0 4.17e-01 93.1% 50.8%
3954254 4.1.1.387 beta barrels › SH3 › SH3 › SH3 › SH3_Rv0428c 0.64 53.0 5.14e-01 94.8% 93.8%
3334322 4.25.1.1 beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › Auxin_resp 0.64 53.0 4.97e-01 96.6% 100.0%
3342814 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.63 53.0 4.53e-01 93.1% 83.2%
4930890 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.63 54.0 4.97e-01 96.6% 82.7%
5062749 4.1.1.30 beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.63 50.0 4.09e-01 89.7% 80.7%
4929875 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.63 51.0 4.27e-01 89.7% 54.0%
3925069 4.1.1.319 beta barrels › SH3 › SH3 › SH3 › SH3_Hsr9 0.63 55.0 4.18e-01 100.0% 70.7%
3636075 4.1.1.221 beta barrels › SH3 › SH3 › SH3 › DUF6914 0.63 54.0 3.93e-01 98.3% 43.3%
3922426 4.1.1.363 beta barrels › SH3 › SH3 › SH3 › Agenet, Tudor_FRX1 0.63 50.0 4.00e-01 89.7% 47.5%
3828371 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.62 55.0 4.86e-01 100.0% 87.1%
3550699 4.8.1.10 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like 0.62 51.0 4.38e-01 91.4% 69.5%
3841414 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.62 50.0 4.71e-01 87.9% 80.0%
3606476 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.62 46.0 4.77e-01 81.0% 85.5%
3826751 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.62 52.0 4.70e-01 93.1% 81.2%
3597002 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 52.0 4.24e-01 93.1% 61.8%
3403363 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.62 53.0 3.50e-01 100.0% 71.7%
3236689 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 53.0 5.41e-01 100.0% 100.0%
3464886 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.61 50.0 4.98e-01 91.4% 95.0%
3414063 4.1.1.233 beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.61 49.0 5.03e-01 89.7% 100.0%
3774692 4.1.1.31 beta barrels › SH3 › SH3 › SH3 › Spin-Ssty 0.61 52.0 4.73e-01 100.0% 90.0%
3373583 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.61 53.0 5.02e-01 100.0% 95.7%
4295399 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.61 50.0 4.18e-01 91.4% 84.0%
3275615 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.60 52.0 4.05e-01 98.3% 48.8%
3710913 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 53.0 4.20e-01 100.0% 73.3%
4085589 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.60 51.0 4.67e-01 100.0% 95.0%
3520654 4.1.1.187 beta barrels › SH3 › SH3 › SH3 › DIRP 0.60 53.0 3.93e-01 100.0% 69.3%
3719639 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 52.0 4.11e-01 100.0% 76.0%
3247934 1.1.7.41 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › UPF1_1B_dom 0.60 50.0 4.39e-01 100.0% 94.7%
3434219 4.25.1.2 beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › BRWD_AD 0.60 48.0 4.23e-01 96.6% 85.3%
3931783 1.1.7.41 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › UPF1_1B_dom 0.59 50.0 4.35e-01 100.0% 95.8%
3448643 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.59 44.0 3.09e-01 82.8% 26.3%
4864011 1.1.7.41 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › UPF1_1B_dom 0.59 51.0 4.26e-01 100.0% 87.6%
3665882 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.59 47.0 3.63e-01 89.7% 41.5%
3591693 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.59 48.0 3.86e-01 98.3% 76.2%
3241817 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 50.0 5.04e-01 100.0% 96.7%
3457163 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.58 48.0 4.39e-01 94.8% 86.3%
3605922 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 51.0 4.30e-01 100.0% 68.0%
3615787 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.58 50.0 3.40e-01 100.0% 74.2%
3815495 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.58 46.0 4.40e-01 89.7% 87.1%
3713571 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 51.0 4.21e-01 100.0% 72.4%
3514556 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 47.0 4.50e-01 93.1% 82.9%
5027789 4.1.1.30 beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.57 45.0 3.85e-01 89.7% 78.0%
3959825 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.57 48.0 4.03e-01 100.0% 97.3%
3754551 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.57 48.0 3.93e-01 100.0% 95.0%
3713672 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 49.0 3.96e-01 100.0% 65.2%
3699247 4.18.1.1 beta barrels › SH3 › Plus3 › Plus3 › Plus-3 0.57 47.0 3.74e-01 100.0% 83.5%
3703933 4.1.1.237 beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.56 50.0 4.83e-01 100.0% 96.9%
3619619 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 49.0 4.63e-01 100.0% 84.3%
5081098 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.56 44.0 2.83e-01 89.7% 40.3%
4028467 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.56 47.0 3.13e-01 100.0% 58.9%
4982570 3604.1.1.1 a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion 0.56 41.0 3.90e-01 81.0% 92.9%
3594578 4.18.1.0 beta barrels › SH3 › Plus3 › Plus3 0.55 45.0 3.76e-01 100.0% 89.2%
3813762 4.25.1.2 beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › BRWD_AD 0.55 46.0 4.52e-01 96.6% 100.0%
3512548 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.55 45.0 3.16e-01 98.3% 79.5%
3428386 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.54 44.0 3.04e-01 100.0% 61.6%
5074282 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.54 37.0 3.84e-01 72.4% 85.5%
1503651 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.54 44.0 4.08e-01 100.0% 77.5%
5051220 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.54 44.0 3.97e-01 100.0% 92.2%
3277196 1.1.8.0 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.53 42.0 3.77e-01 89.7% 64.7%
3056322 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.52 42.0 3.58e-01 100.0% 96.4%
3611425 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.51 43.0 3.88e-01 98.3% 87.1%
3965887 11.1.1.457 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › FixH 0.51 39.0 3.31e-01 87.9% 56.2%
4444537 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.50 34.0 2.82e-01 89.7% 36.7%