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AF125376.2__AAD20628.2__X__00002
Bact-VirAF125376.2__AAD20628.2__X__00002
Identity
- Accession:
- AF125376 ↗
- Kingdom:
- phage
Quality
73.1
mean pLDDT
Taxonomy
TaxID: 2886926
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 240-308
Domain cluster:
representative
CATH (48)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yawB01 | 3.30.1330.10 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain | 0.74 | 55.0 | 4.40e-01 | 100.0% | 41.0% |
| 3cniA00 | 3.40.1710.10 | Alpha Beta › 3-Layer(aba) Sandwich › abc type-2 transporter like fold › abc type-2 transporter like domain | 0.73 | 56.0 | 4.42e-01 | 84.1% | 42.8% |
| 2bx2L02 | 3.40.1260.20 | Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Ychn; Chain: A, › Ribonuclease E, catalytic domain | 0.69 | 50.0 | 4.31e-01 | 100.0% | 49.1% |
| 2r75102 | 3.30.1330.20 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain | 0.68 | 52.0 | 4.47e-01 | 100.0% | 51.8% |
| 1ghhA00 | 3.30.910.10 | Alpha Beta › 2-Layer Sandwich › Protein Binding, DinI Protein; Chain A › DinI-like | 0.67 | 49.0 | 4.68e-01 | 100.0% | 66.7% |
| 2fgyA03 | 3.30.1330.140 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Carboxysome Shell Carbonic Anhydrase, C-terminal domain | 0.67 | 49.0 | 4.17e-01 | 85.5% | 47.0% |
| 7p8na01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.67 | 51.0 | 4.84e-01 | 98.6% | 69.9% |
| 4v1ag00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.66 | 48.0 | 3.76e-01 | 100.0% | 35.8% |
| 1otgA00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.66 | 52.0 | 4.27e-01 | 85.5% | 85.6% |
| 3mydA01 | 3.40.30.60 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › FHIPEP family, domain 1 | 0.65 | 57.0 | 4.54e-01 | 100.0% | 98.6% |
| 4wnyA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.64 | 58.0 | 4.62e-01 | 100.0% | 69.7% |
| 7vw6B02 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.63 | 45.0 | 4.55e-01 | 98.6% | 75.7% |
| 4o89A02 | 3.30.360.20 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › RNA 3'-terminal phosphate cyclase, insert domain | 0.62 | 48.0 | 4.39e-01 | 100.0% | 62.8% |
| 2ig8A00 | 3.30.1330.40 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like | 0.61 | 48.0 | 3.81e-01 | 100.0% | 41.5% |
| 4m1aA00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.61 | 49.0 | 4.24e-01 | 100.0% | 57.0% |
| 2yxzD01 | 3.30.1330.10 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain | 0.60 | 42.0 | 3.41e-01 | 100.0% | 35.9% |
| 3i3fB00 | 3.30.1330.40 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like | 0.60 | 43.0 | 3.63e-01 | 100.0% | 42.2% |
| 2x49A01 | 3.40.30.60 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › FHIPEP family, domain 1 | 0.60 | 53.0 | 4.75e-01 | 100.0% | 91.7% |
| 1q7sA00 | 3.40.1490.10 | Alpha Beta › 3-Layer(aba) Sandwich › Bit1 › Bit1 | 0.60 | 53.0 | 4.48e-01 | 100.0% | 90.6% |
| 2ywmA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.60 | 51.0 | 4.40e-01 | 100.0% | 59.1% |
| 2fltA00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.60 | 52.0 | 4.37e-01 | 97.1% | 92.3% |
| 4mp4A01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.59 | 40.0 | 3.74e-01 | 94.2% | 55.1% |
| 4u5pA00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.59 | 52.0 | 4.15e-01 | 100.0% | 77.1% |
| 1r5pB00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.58 | 51.0 | 4.69e-01 | 100.0% | 97.8% |
| 3ec3A02 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.58 | 51.0 | 4.28e-01 | 100.0% | 57.1% |
| 2npbA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.58 | 52.0 | 4.79e-01 | 100.0% | 98.9% |
| 3gnjA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.58 | 46.0 | 4.01e-01 | 100.0% | 55.9% |
| 4nwyA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.57 | 49.0 | 4.09e-01 | 100.0% | 53.9% |
| 1qu9A00 | 3.30.1330.40 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like | 0.57 | 40.0 | 3.37e-01 | 100.0% | 40.9% |
| 1pzxA03 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.57 | 46.0 | 3.83e-01 | 100.0% | 50.8% |
| 4a5pB01 | 3.40.30.60 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › FHIPEP family, domain 1 | 0.56 | 50.0 | 4.10e-01 | 100.0% | 95.2% |
| 5j7dC00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.56 | 46.0 | 4.05e-01 | 100.0% | 61.3% |
| 2wkbA01 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.56 | 49.0 | 4.40e-01 | 98.6% | 100.0% |
| 3hz4A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.55 | 45.0 | 3.86e-01 | 100.0% | 54.2% |
| 3t1iA02 | 3.30.110.110 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Mre11, capping domain | 0.55 | 46.0 | 4.20e-01 | 94.2% | 97.9% |
| 2g2qB01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.55 | 49.0 | 4.11e-01 | 98.6% | 68.4% |
| 5hy0A01 | 3.30.1330.170 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Cyanuric acid hydrolase/Barbiturase, RU A | 0.54 | 45.0 | 4.02e-01 | 100.0% | 63.0% |
| 5aykA04 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.54 | 43.0 | 3.79e-01 | 100.0% | 58.8% |
| 3c8lB00 | 3.30.1330.20 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain | 0.54 | 47.0 | 3.89e-01 | 100.0% | 55.5% |
| 7t85A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 46.0 | 3.53e-01 | 95.7% | 88.8% |
| 2ymbA00 | 3.30.870.30 | Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › MITD, C-terminal phospholipase D-like domain | 0.54 | 47.0 | 3.68e-01 | 100.0% | 54.2% |
| 2gm3A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.53 | 45.0 | 3.57e-01 | 97.1% | 87.6% |
| 3ewlB00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 46.0 | 3.75e-01 | 100.0% | 67.9% |
| 4nxiA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 45.0 | 3.32e-01 | 97.1% | 76.2% |
| 3erwF00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 45.0 | 3.75e-01 | 100.0% | 69.5% |
| 1nvmB02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.52 | 44.0 | 3.52e-01 | 100.0% | 77.9% |
| 1t1vA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.52 | 46.0 | 4.18e-01 | 98.6% | 73.1% |
| 3fovA00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.52 | 39.0 | 3.48e-01 | 92.8% | 55.9% |
ECOD (59)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4026782 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.81 | 75.0 | 5.75e-01 | 100.0% | 57.9% |
| 4449681 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.78 | 64.0 | 5.47e-01 | 94.2% | 57.1% |
| 3361675 | 301.7.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like › Ribonuc_L-PSP | 0.76 | 67.0 | 5.24e-01 | 100.0% | 48.0% |
| 3216774 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.75 | 68.0 | 4.91e-01 | 100.0% | 98.9% |
| 4030524 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.72 | 55.0 | 5.00e-01 | 100.0% | 60.0% |
| 4576632 | 2485.1.1.6 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › FHIPEP | 0.71 | 60.0 | 5.11e-01 | 100.0% | 58.2% |
| 3715164 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.70 | 60.0 | 4.73e-01 | 100.0% | 79.4% |
| 4969915 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.70 | 63.0 | 4.24e-01 | 100.0% | 45.9% |
| 3709544 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.69 | 59.0 | 5.24e-01 | 100.0% | 79.0% |
| 3470605 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.68 | 61.0 | 4.74e-01 | 100.0% | 68.0% |
| 3700570 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.68 | 60.0 | 4.58e-01 | 100.0% | 54.4% |
| 3221042 | 2485.1.1.108 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › PF29046 | 0.68 | 60.0 | 4.87e-01 | 100.0% | 56.2% |
| 3968393 | 2485.1.1.6 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › FHIPEP | 0.67 | 60.0 | 5.15e-01 | 100.0% | 88.2% |
| 3444321 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.67 | 60.0 | 4.49e-01 | 100.0% | 66.5% |
| 3466249 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.67 | 61.0 | 4.18e-01 | 100.0% | 31.6% |
| 3450582 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.66 | 60.0 | 4.83e-01 | 100.0% | 77.7% |
| 4952920 | 327.7.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like | 0.66 | 48.0 | 4.64e-01 | 85.5% | 67.5% |
| 3438608 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.66 | 59.0 | 4.35e-01 | 100.0% | 65.6% |
| 3433431 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.66 | 59.0 | 4.47e-01 | 100.0% | 43.6% |
| 3545098 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.65 | 51.0 | 3.62e-01 | 85.5% | 85.1% |
| 3460340 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.65 | 49.0 | 3.53e-01 | 82.6% | 53.3% |
| 5041441 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.64 | 57.0 | 4.40e-01 | 100.0% | 60.0% |
| 3263273 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.64 | 57.0 | 4.47e-01 | 100.0% | 48.0% |
| 3696014 | 2485.1.1.110 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › PF26958 | 0.64 | 55.0 | 3.97e-01 | 97.1% | 69.8% |
| 4426322 | 2485.1.1.6 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › FHIPEP | 0.63 | 52.0 | 4.50e-01 | 100.0% | 58.2% |
| 3469356 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.63 | 55.0 | 4.19e-01 | 100.0% | 63.0% |
| 4964713 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.63 | 56.0 | 4.45e-01 | 100.0% | 85.7% |
| 3280817 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.62 | 43.0 | 4.00e-01 | 72.5% | 60.0% |
| 3512946 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.62 | 55.0 | 4.11e-01 | 100.0% | 62.9% |
| 3996836 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.62 | 53.0 | 4.05e-01 | 100.0% | 42.9% |
| 5048562 | 2500.1.1.4 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › DUF711 | 0.62 | 53.0 | 3.30e-01 | 100.0% | 46.4% |
| 2701813 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.61 | 53.0 | 4.33e-01 | 95.7% | 78.0% |
| 3838560 | 2008.1.1.78 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_endonuc | 0.61 | 45.0 | 3.32e-01 | 81.2% | 32.8% |
| 3600245 | 2007.1.14.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Ferrochelatase | 0.61 | 55.0 | 3.94e-01 | 100.0% | 50.3% |
| 3021564 | 327.10.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › RBFA | 0.60 | 46.0 | 3.63e-01 | 85.5% | 69.1% |
| 4953990 | 4975.1.1.0 ↗ | a/b three-layered sandwiches › CbiG linker domain › CbiG linker domain › CbiG linker domain | 0.59 | 40.0 | 3.82e-01 | 95.7% | 57.6% |
| 4289827 | 327.10.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › RBFA | 0.59 | 45.0 | 3.90e-01 | 84.1% | 87.3% |
| 4973985 | 298.3.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › Serine dehydratase beta chain-like › Serine dehydratase beta chain-like | 0.59 | 51.0 | 4.19e-01 | 100.0% | 59.2% |
| 4957971 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.58 | 51.0 | 4.15e-01 | 100.0% | 64.4% |
| 2137592 | 315.1.1.6 ↗ | a+b two layers › Tautomerase/MIF-like › Tautomerase/MIF › Tautomerase/MIF › Tautomerase_3 | 0.58 | 50.0 | 4.27e-01 | 97.1% | 97.3% |
| 4368596 | 301.7.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like › Ribonuc_L-PSP | 0.57 | 40.0 | 3.40e-01 | 100.0% | 40.6% |
| 5028579 | 301.2.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS | 0.57 | 47.0 | 3.46e-01 | 100.0% | 33.3% |
| 5055724 | 301.7.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like | 0.57 | 49.0 | 3.89e-01 | 100.0% | 50.7% |
| 4946237 | 2501.1.1.1 ↗ | a/b three-layered sandwiches › Peptidyl-tRNA hydrolase II › Peptidyl-tRNA hydrolase II › Peptidyl-tRNA hydrolase II › PTH2 | 0.56 | 49.0 | 4.20e-01 | 100.0% | 91.3% |
| 4957325 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.56 | 48.0 | 4.15e-01 | 97.1% | 76.4% |
| 3932113 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.56 | 48.0 | 3.90e-01 | 100.0% | 51.4% |
| 3172618 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.56 | 48.0 | 4.31e-01 | 98.6% | 79.0% |
| 4947020 | 2501.1.1.1 ↗ | a/b three-layered sandwiches › Peptidyl-tRNA hydrolase II › Peptidyl-tRNA hydrolase II › Peptidyl-tRNA hydrolase II › PTH2 | 0.56 | 50.0 | 4.24e-01 | 100.0% | 93.0% |
| 6782 | 298.3.1.2 ↗ | a+b two layers › FwdE/GAPDH domain-like › Serine dehydratase beta chain-like › Serine dehydratase beta chain-like › PGDH_inter | 0.56 | 48.0 | 3.95e-01 | 100.0% | 57.0% |
| 5023403 | 327.11.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_2 | 0.56 | 42.0 | 4.14e-01 | 87.0% | 77.3% |
| 3277850 | 2501.1.1.1 ↗ | a/b three-layered sandwiches › Peptidyl-tRNA hydrolase II › Peptidyl-tRNA hydrolase II › Peptidyl-tRNA hydrolase II › PTH2 | 0.55 | 47.0 | 4.25e-01 | 97.1% | 98.9% |
| 5004699 | 298.3.1.2 ↗ | a+b two layers › FwdE/GAPDH domain-like › Serine dehydratase beta chain-like › Serine dehydratase beta chain-like › PGDH_inter | 0.54 | 46.0 | 3.81e-01 | 100.0% | 55.6% |
| 4982172 | 2485.1.1.37 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_2 | 0.54 | 47.0 | 4.16e-01 | 97.1% | 75.0% |
| 3788788 | 2485.1.1.51 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_14 | 0.53 | 46.0 | 3.22e-01 | 100.0% | 64.9% |
| 5083508 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.52 | 43.0 | 3.91e-01 | 95.7% | 69.0% |
| 4982246 | 3521.1.1.0 ↗ | a+b three layers › Polymerase basic protein 2 cap-binding domain › Polymerase basic protein 2 cap-binding domain › Polymerase basic protein 2 cap-binding domain | 0.52 | 40.0 | 3.62e-01 | 91.3% | 59.0% |
| 4968136 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.51 | 41.0 | 3.31e-01 | 97.1% | 71.2% |
| 5011133 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.50 | 41.0 | 3.53e-01 | 97.1% | 66.4% |
| 3674363 | 2004.1.1.44 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PRK | 0.50 | 36.0 | 2.99e-01 | 78.3% | 47.1% |
D2
medium
residues 18-67_327-404
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ev6A03 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.73 | 23.0 | 3.57e-01 | 71.9% | 65.5% |
| 7ztbB01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.59 | 34.0 | 3.12e-01 | 87.5% | 43.6% |
| 6yxr101 | 1.10.3460.10 | Mainly Alpha › Orthogonal Bundle › Chlorophyll a-b binding protein › Chlorophyll a/b binding protein domain | 0.51 | 34.0 | 3.12e-01 | 91.4% | 50.0% |
| 3ungC01 | 3.30.70.2220 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › CRISPR-Cas system, Cmr2 subunit, D1 domain, cysteine cluster | 0.51 | 38.0 | 3.09e-01 | 78.1% | 60.0% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5078462 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.58 | 46.0 | 3.65e-01 | 85.9% | 84.4% |
| 4164698 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.51 | 31.0 | 3.31e-01 | 74.2% | 70.0% |
D3
medium
residues 68-177_194-214
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kdrA02 | 3.40.140.120 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › | 0.68 | 46.0 | 4.69e-01 | 73.3% | 70.9% |
| 7bjkA02 | 3.55.40.20 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain | 0.53 | 33.0 | 3.54e-01 | 89.3% | 72.6% |
| 4ffkA02 | 3.55.40.20 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain | 0.51 | 33.0 | 3.45e-01 | 90.1% | 68.3% |
| 1xreA02 | 3.55.40.20 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain | 0.51 | 33.0 | 3.54e-01 | 89.3% | 75.9% |
| 1gn4A02 | 3.55.40.20 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain | 0.51 | 32.0 | 3.40e-01 | 93.1% | 70.4% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3260834 | 228.1.1.1 ↗ | a+b three layers › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Sod_Fe_C | 0.53 | 33.0 | 3.47e-01 | 87.0% | 68.7% |
| 4185540 | 228.1.1.1 ↗ | a+b three layers › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Sod_Fe_C | 0.52 | 35.0 | 3.53e-01 | 93.1% | 68.8% |
| 3893472 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.51 | 26.0 | 3.07e-01 | 80.9% | 70.6% |
D4
medium
residues 406-493
D5
medium
residues 505-561_597-614_635-650
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1g5gA02 | 1.10.287.2480 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.57 | 43.0 | 3.48e-01 | 79.1% | 100.0% |
| 3encA00 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.54 | 44.0 | 4.66e-01 | 92.3% | 98.7% |
| 3cx5A01 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.52 | 42.0 | 3.27e-01 | 87.9% | 73.8% |
| 1khmA00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.51 | 41.0 | 4.19e-01 | 96.7% | 89.9% |
| 3kepA00 | 3.30.1610.10 | Alpha Beta › 2-Layer Sandwich › c-terminal autoproteolytic domain of nucleoporin nup98 › Peptidase S59, nucleoporin | 0.51 | 36.0 | 3.09e-01 | 81.3% | 45.8% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3407270 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.53 | 41.0 | 4.39e-01 | 90.1% | 100.0% |
| 3722925 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.53 | 44.0 | 4.21e-01 | 93.4% | 80.0% |
| 3800751 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.50 | 40.0 | 4.10e-01 | 89.0% | 88.9% |
D6
medium
residues 615-634_651-709
D7
medium
residues 722-803
Domain cluster:
rep: MF356679.1__ASR76328.1__D6_21__00021__D233-298
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1mswD01 | 1.10.1320.10 | Mainly Alpha › Orthogonal Bundle › T7 RNA polymerase; domain 1 › DNA-directed RNA polymerase, N-terminal domain | 0.55 | 44.0 | 2.99e-01 | 87.8% | 57.7% |
ECOD (1)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| None | — | 0.73 | 55.0 | 3.83e-01 | 80.5% | 29.8% |