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AF133242.2__AAF18321.1__X__00012
Bact-VirAF133242.2__AAF18321.1__X__00012
Identity
- Accession:
- AF133242 ↗
- Kingdom:
- phage
Quality
84.4
mean pLDDT
Taxonomy
Loebvirae›
Hofneiviricota›
Faserviricetes›
Tubulavirales›
Plectroviridae›
Suturavirus›
Spiroplasma_phage_SVTS2
TaxID: 93224
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-51
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1cpcB00 | 1.10.490.20 | Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins | 0.73 | 61.0 | 4.12e-01 | 91.7% | 28.5% |
| 3b0dB00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.73 | 61.0 | 5.05e-01 | 100.0% | 50.5% |
| 1j8yF01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.67 | 49.0 | 4.01e-01 | 83.3% | 43.0% |
| 1vzsA01 | 1.10.246.110 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Mitochondrial ATP synthase-coupling factor 6 | 0.63 | 45.0 | 4.19e-01 | 85.4% | 60.3% |
| 4wj3C01 | 1.10.20.60 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Glu-tRNAGln amidotransferase C subunit, N-terminal domain | 0.61 | 48.0 | 4.97e-01 | 97.9% | 93.3% |
| 2w43A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.61 | 42.0 | 4.07e-01 | 75.0% | 63.2% |
| 3eabG00 | 6.10.250.440 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.60 | 46.0 | 5.05e-01 | 85.4% | 97.5% |
| 1af7A01 | 1.10.155.10 | Mainly Alpha › Orthogonal Bundle › Chemotaxis Receptor Methyltransferase Cher; domain 1 › Chemotaxis receptor methyltransferase CheR, N-terminal domain | 0.59 | 41.0 | 3.64e-01 | 77.1% | 51.2% |
| 3kfuG01 | 1.10.20.60 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Glu-tRNAGln amidotransferase C subunit, N-terminal domain | 0.58 | 41.0 | 4.41e-01 | 83.3% | 100.0% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3960907 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.82 | 72.0 | 4.28e-01 | 100.0% | 14.5% |
| 2559826 | 2004.1.1.85 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ArsA_ATPase | 0.80 | 69.0 | 4.12e-01 | 100.0% | 14.2% |
| 3739516 | 103.12.1.0 ↗ | alpha arrays › RuvA-C › ANTAR domain › ANTAR domain | 0.74 | 48.0 | 4.77e-01 | 70.8% | 64.0% |
| 4221251 | 1128.1.1.8 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › PF29574 | 0.67 | 52.0 | 4.23e-01 | 83.3% | 80.0% |
| 3585834 | 103.11.1.1 ↗ | alpha arrays › RuvA-C › RMI1 N-terminal helical domain-related › RMI1 N-terminal helical domain-related › RMI1_N_N | 0.63 | 42.0 | 4.12e-01 | 70.8% | 61.8% |