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AF148566.1__AAF24757.1__X__00001
Bact-VirAF148566.1__AAF24757.1__X__00001
Identity
- Accession:
- AF148566 ↗
- Kingdom:
- phage
Quality
85.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 76-182
Domain cluster:
rep: KU981050.1__ANU78869.1__X__00026__D198-310
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF16775.11 best | ZoocinA_TRD | 97.1 | 9.00e-28 | 100.0% | 96.2% |
D2
medium
residues 1-57
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05382.20 best | Amidase_5 | 24.9 | 2.40e-05 | 100.0% | 35.2% |
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bbjA00 | 2.40.160.210 | Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain | 0.58 | 42.0 | 2.70e-01 | 77.2% | 69.7% |
| 7zoiA01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.58 | 44.0 | 3.52e-01 | 86.0% | 89.3% |
| 1y2mD01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.56 | 45.0 | 3.02e-01 | 87.7% | 34.5% |
| 2crfA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 41.0 | 3.37e-01 | 86.0% | 43.2% |
| 2v6eA03 | 1.10.443.30 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Telomere resolvase | 0.55 | 44.0 | 2.96e-01 | 89.5% | 22.2% |
| 4b1bA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 39.0 | 2.34e-01 | 75.4% | 16.7% |
| 2v8qA01 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.54 | 38.0 | 3.30e-01 | 75.4% | 74.2% |
| 3dlbA04 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.54 | 42.0 | 3.12e-01 | 93.0% | 61.1% |
| 3h7oA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.54 | 45.0 | 3.62e-01 | 93.0% | 80.4% |
| 5ylyA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 40.0 | 3.35e-01 | 86.0% | 82.1% |
| 4zfvB01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 40.0 | 2.92e-01 | 87.7% | 93.0% |
| 3kf8B00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 42.0 | 3.37e-01 | 91.2% | 79.2% |
| 3fb9B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 42.0 | 3.75e-01 | 89.5% | 64.3% |
| 2lc4A00 | 2.30.30.830 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 38.0 | 3.05e-01 | 77.2% | 84.7% |
| 4zglD00 | 3.30.428.10 | Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like | 0.52 | 35.0 | 2.98e-01 | 71.9% | 83.3% |
| 1jssA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 38.0 | 2.68e-01 | 80.7% | 63.3% |
| 2ec1A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 42.0 | 3.37e-01 | 93.0% | 52.5% |
| 3gjyA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 37.0 | 2.48e-01 | 86.0% | 31.2% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3798234 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.64 | 46.0 | 3.82e-01 | 75.4% | 82.0% |
| 3628199 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.64 | 45.0 | 3.81e-01 | 75.4% | 82.0% |
| 4649158 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.64 | 53.0 | 5.17e-01 | 96.5% | 100.0% |
| 3938415 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.62 | 43.0 | 4.15e-01 | 82.5% | 64.6% |
| 4014194 | 4075.1.1.0 ↗ | a+b complex topology › RGC domain › RGC domain › RGC domain | 0.57 | 46.0 | 3.90e-01 | 93.0% | 93.0% |
| 3742908 | 4075.1.1.2 ↗ | a+b complex topology › RGC domain › RGC domain › RGC domain › PF29130 | 0.56 | 45.0 | 3.91e-01 | 93.0% | 94.7% |
| 4570188 | 4263.2.1.1 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext | 0.55 | 39.0 | 3.70e-01 | 77.2% | 64.3% |
| 4357660 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 45.0 | 2.81e-01 | 96.5% | 97.1% |
| 4385298 | 3421.1.1.1 ↗ | a+b complex topology › Yos9 dimerization domain › Yos9 dimerization domain › Yos9 dimerization domain › Yos9_DD | 0.54 | 37.0 | 2.89e-01 | 71.9% | 75.2% |
| 3721465 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.54 | 44.0 | 3.40e-01 | 98.2% | 75.3% |
| 4202667 | 4263.2.1.1 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext | 0.54 | 38.0 | 3.74e-01 | 77.2% | 69.2% |
| 3739384 | 4075.1.1.2 ↗ | a+b complex topology › RGC domain › RGC domain › RGC domain › PF29130 | 0.54 | 43.0 | 3.71e-01 | 93.0% | 91.9% |
| 4270579 | 220.1.1.121 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SLA1 | 0.53 | 40.0 | 3.35e-01 | 82.5% | 48.6% |
| 4193599 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 40.0 | 3.34e-01 | 82.5% | 58.1% |
| 3236987 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 44.0 | 3.56e-01 | 94.7% | 56.5% |
| 5022747 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.53 | 38.0 | 2.51e-01 | 75.4% | 77.8% |
| 3231154 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 41.0 | 3.71e-01 | 86.0% | 77.5% |
| 4024063 | 101.1.2.28 ↗ | alpha arrays › HTH › HTH › winged helix domain › eIF-5_eIF-2B | 0.53 | 37.0 | 3.22e-01 | 75.4% | 70.5% |
| 3718078 | 243.6.1.0 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain | 0.52 | 38.0 | 2.98e-01 | 80.7% | 57.8% |
| 3605414 | 243.6.1.10 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › Pre-PUA_NSUN2 | 0.52 | 37.0 | 3.11e-01 | 78.9% | 54.1% |
| 4626774 | 4263.2.1.0 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain | 0.51 | 36.0 | 3.53e-01 | 77.2% | 69.2% |
| 3923845 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.51 | 39.0 | 3.13e-01 | 89.5% | 64.4% |
| 5048901 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.50 | 38.0 | 2.56e-01 | 89.5% | 23.6% |
| 3333660 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.50 | 39.0 | 2.92e-01 | 87.7% | 48.8% |