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AF151674.1__AAF63038.1__X__00005
Bact-VirAF151674.1__AAF63038.1__X__00005
Identity
- Accession:
- AF151674 ↗
- Kingdom:
- phage
Quality
86.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 176-307
Domain cluster:
rep: IMGVR_UViG_3300005520_000196-3300005520-Ga0066864_100047611__D25-128
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02395.23 best | Peptidase_S6 | 117.5 | 1.10e-33 | 95.5% | 46.9% |
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wxrA01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.98 | 96.0 | 7.34e-01 | 100.0% | 52.5% |
| 3h09A01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.90 | 87.0 | 6.31e-01 | 100.0% | 49.0% |
| 3szeA01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.81 | 76.0 | 5.65e-01 | 100.0% | 44.8% |
| 2ey4D00 | 2.40.10.230 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain | 0.78 | 36.0 | 4.82e-01 | 78.8% | 80.0% |
| 3cp7B02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.75 | 57.0 | 6.34e-01 | 100.0% | 98.1% |
| 1a1rA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.74 | 47.0 | 5.79e-01 | 99.2% | 100.0% |
| 3k6yA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.71 | 55.0 | 6.12e-01 | 100.0% | 99.1% |
| 4i86A00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.71 | 45.0 | 5.08e-01 | 93.9% | 82.4% |
| 4f4oC02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.70 | 66.0 | 6.25e-01 | 100.0% | 89.6% |
| 5jpmH01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.69 | 61.0 | 6.05e-01 | 93.9% | 90.4% |
| 5hmaA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.67 | 51.0 | 5.69e-01 | 100.0% | 100.0% |
| 4rt0A00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.65 | 44.0 | 4.80e-01 | 93.2% | 83.5% |
| 2sfaA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.64 | 37.0 | 4.36e-01 | 87.1% | 82.4% |
| 3nxpA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.62 | 54.0 | 4.81e-01 | 93.9% | 67.0% |
| 4r8oA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.59 | 28.0 | 3.21e-01 | 87.1% | 58.2% |
| 1loxA02 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.54 | 37.0 | 3.97e-01 | 91.7% | 82.0% |
| 3mswA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 29.0 | 2.88e-01 | 87.1% | 49.6% |
| 4r03A00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 29.0 | 3.12e-01 | 87.1% | 62.4% |
| 1u5kA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 27.0 | 3.23e-01 | 97.0% | 76.8% |
| 2qz5A00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.50 | 40.0 | 3.81e-01 | 90.9% | 73.0% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2060704 | 1.1.5.13 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_S6 | 0.93 | 90.0 | 6.90e-01 | 100.0% | 51.0% |
| 3964570 | 1.1.5.13 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_S6 | 0.93 | 90.0 | 6.75e-01 | 100.0% | 50.5% |
| 3165269 | 1.1.5.13 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_S6 | 0.93 | 90.0 | 6.75e-01 | 100.0% | 50.5% |
| 185293 | 1.1.5.13 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_S6 | 0.90 | 87.0 | 6.32e-01 | 100.0% | 49.2% |
| 1096951 | 1.1.5.13 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_S6 | 0.81 | 76.0 | 5.97e-01 | 100.0% | 53.5% |
| 5063379 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.80 | 56.0 | 5.02e-01 | 100.0% | 52.8% |
| 1309427 | 1.1.5.13 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_S6 | 0.78 | 73.0 | 5.78e-01 | 100.0% | 54.4% |
| 3399946 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.77 | 66.0 | 5.25e-01 | 100.0% | 48.8% |
| 3950458 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.76 | 53.0 | 4.72e-01 | 100.0% | 52.2% |
| 3798415 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.76 | 68.0 | 5.21e-01 | 100.0% | 46.4% |
| 3416167 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.76 | 66.0 | 5.22e-01 | 100.0% | 48.4% |
| 3798540 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.76 | 67.0 | 5.17e-01 | 100.0% | 45.7% |
| 3568406 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.75 | 67.0 | 5.19e-01 | 100.0% | 46.8% |
| 3513910 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.75 | 67.0 | 5.20e-01 | 100.0% | 47.1% |
| 3409619 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.75 | 68.0 | 5.32e-01 | 100.0% | 48.8% |
| 3561778 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.75 | 68.0 | 5.28e-01 | 100.0% | 49.0% |
| 3398452 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.75 | 68.0 | 5.29e-01 | 100.0% | 48.6% |
| 4241887 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.75 | 66.0 | 5.12e-01 | 100.0% | 46.4% |
| 3776585 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.74 | 67.0 | 5.26e-01 | 100.0% | 49.0% |
| 3246847 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.74 | 51.0 | 4.39e-01 | 100.0% | 47.2% |
| 3415802 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.74 | 64.0 | 4.89e-01 | 100.0% | 42.9% |
| 3398931 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.74 | 66.0 | 5.18e-01 | 100.0% | 48.6% |
| 1680525 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.74 | 56.0 | 4.69e-01 | 100.0% | 47.9% |
| 3527303 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.73 | 67.0 | 5.18e-01 | 100.0% | 47.9% |
| 3390369 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.73 | 67.0 | 5.21e-01 | 100.0% | 48.8% |
| 3413093 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.73 | 65.0 | 5.08e-01 | 100.0% | 48.6% |
| 3390498 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.72 | 65.0 | 5.07e-01 | 100.0% | 48.1% |
| 3392656 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.72 | 63.0 | 4.88e-01 | 100.0% | 45.7% |
| 3879740 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.72 | 66.0 | 5.09e-01 | 100.0% | 47.4% |
| None | — | 0.72 | 67.0 | 5.25e-01 | 100.0% | 51.0% | |
| 3230604 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.71 | 68.0 | 5.19e-01 | 100.0% | 51.9% |
| 2526842 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.71 | 61.0 | 4.85e-01 | 100.0% | 48.4% |
| 3411245 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.71 | 65.0 | 5.01e-01 | 100.0% | 47.0% |
| 3843200 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.71 | 63.0 | 4.92e-01 | 100.0% | 47.5% |
| 3409888 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.71 | 63.0 | 4.91e-01 | 100.0% | 47.3% |
| 3233235 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.71 | 65.0 | 4.91e-01 | 100.0% | 44.7% |
| 3219729 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.71 | 67.0 | 5.14e-01 | 100.0% | 48.9% |
| 3406777 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.71 | 62.0 | 4.86e-01 | 100.0% | 46.9% |
| 3235083 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.71 | 67.0 | 5.03e-01 | 100.0% | 45.8% |
| 3754903 | 1.1.17.13 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin, Thrombin_light | 0.70 | 66.0 | 4.92e-01 | 100.0% | 43.9% |
| 3559927 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.70 | 61.0 | 4.78e-01 | 100.0% | 47.1% |
| 2137682 | 1.1.5.32 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZNR | 0.70 | 49.0 | 5.46e-01 | 92.4% | 93.1% |
| 3576746 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.68 | 61.0 | 5.36e-01 | 100.0% | 67.6% |
| 4485576 | 1.1.17.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Peptidase_S64 | 0.67 | 55.0 | 4.15e-01 | 100.0% | 38.6% |
| 3409540 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.67 | 59.0 | 4.75e-01 | 100.0% | 51.0% |
| 4137973 | 1.1.5.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZN | 0.66 | 51.0 | 5.51e-01 | 95.5% | 95.5% |
| 3789008 | 1.1.5.85 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_S64 | 0.65 | 55.0 | 4.07e-01 | 100.0% | 37.5% |
| 3400560 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.65 | 54.0 | 4.36e-01 | 100.0% | 47.2% |
| 3390505 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.64 | 56.0 | 4.51e-01 | 100.0% | 50.8% |
| 4331397 | 1.1.8.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › YgfZ_barrel | 0.62 | 31.0 | 3.88e-01 | 90.9% | 77.5% |
| 3276050 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.62 | 41.0 | 3.42e-01 | 85.6% | 37.7% |
| 1273 | 10.10.1.1 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT | 0.54 | 37.0 | 3.94e-01 | 91.7% | 82.0% |
| 3560854 | 10.10.1.1 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT | 0.51 | 37.0 | 3.60e-01 | 93.9% | 68.3% |
D2
medium
residues 326-427
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ak5D02 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.99 | 97.0 | 5.59e-01 | 100.0% | 14.9% |
| 3h09B02 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.96 | 93.0 | 5.70e-01 | 100.0% | 21.8% |
| 3syjA02 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.91 | 84.0 | 4.96e-01 | 100.0% | 15.4% |
| 3bxpB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.60 | 49.0 | 3.67e-01 | 90.2% | 59.9% |
| 5jlvC00 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.59 | 49.0 | 5.05e-01 | 98.0% | 96.9% |
| 2cttA01 | 2.10.230.10 | Mainly Beta › Ribbon › Chaperone, DNAj Protein; Chain A › Heat shock protein DnaJ, cysteine-rich domain | 0.56 | 23.0 | 2.71e-01 | 93.1% | 52.2% |
| 1orvA02 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 48.0 | 3.65e-01 | 100.0% | 71.3% |
| 1nthA00 | 3.20.20.460 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Monomethylamine methyltransferase MtmB | 0.54 | 45.0 | 3.06e-01 | 95.1% | 79.6% |
| 1g8mA02 | 3.40.140.20 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › AICAR transformylase, duplication domain | 0.51 | 41.0 | 3.50e-01 | 90.2% | 70.5% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4377115 | 5084.3.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter | 0.99 | 97.0 | 5.37e-01 | 100.0% | 9.7% |
| 1396451 | 207.2.1.60 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta-sol_PIC_HAP1_IgA0_2nd | 0.99 | 97.0 | 5.51e-01 | 100.0% | 13.2% |
| 3165709 | 207.2.1.75 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pertactin, Beta-sol_PIC_HAP1_IgA0_2nd | 0.96 | 93.0 | 5.56e-01 | 100.0% | 18.6% |
| 3964571 | 207.2.1.75 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pertactin, Beta-sol_PIC_HAP1_IgA0_2nd | 0.96 | 93.0 | 5.37e-01 | 100.0% | 18.5% |
| 3165271 | 207.2.1.60 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta-sol_PIC_HAP1_IgA0_2nd | 0.96 | 93.0 | 5.68e-01 | 100.0% | 27.3% |
| 4588882 | 207.2.1.60 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta-sol_PIC_HAP1_IgA0_2nd | 0.89 | 78.0 | 4.56e-01 | 100.0% | 13.1% |
| 1395410 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.88 | 74.0 | 4.36e-01 | 100.0% | 13.1% |
| 2516583 | 207.14.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › Bactofilin | 0.74 | 46.0 | 4.84e-01 | 100.0% | 70.0% |
| 5041137 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.73 | 47.0 | 5.51e-01 | 100.0% | 95.7% |
| 3289663 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.67 | 60.0 | 4.75e-01 | 100.0% | 59.8% |
| 4965696 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.66 | 60.0 | 4.32e-01 | 100.0% | 47.6% |
| 4210922 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.66 | 59.0 | 4.36e-01 | 100.0% | 53.7% |
| 4041561 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.66 | 59.0 | 4.43e-01 | 100.0% | 54.5% |
| 4101649 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.65 | 58.0 | 4.34e-01 | 100.0% | 50.4% |
| 5006685 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.63 | 49.0 | 4.40e-01 | 100.0% | 60.0% |
| 5020282 | 208.1.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep | 0.63 | 49.0 | 5.09e-01 | 100.0% | 89.5% |
| 4927282 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.62 | 55.0 | 4.10e-01 | 100.0% | 50.2% |
| 3741632 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.61 | 44.0 | 4.49e-01 | 100.0% | 77.0% |
| 3769689 | 207.14.1.3 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › DUF5585 | 0.61 | 40.0 | 4.53e-01 | 100.0% | 90.7% |
| 3572525 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.60 | 42.0 | 4.61e-01 | 100.0% | 91.3% |
| 5020283 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.60 | 46.0 | 4.33e-01 | 100.0% | 67.2% |
| 3391275 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.60 | 43.0 | 4.33e-01 | 100.0% | 74.3% |
| 3625269 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.60 | 53.0 | 3.83e-01 | 100.0% | 39.3% |
| 4015360 | 7579.1.1.18 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_2 | 0.59 | 51.0 | 3.85e-01 | 96.1% | 87.6% |
| 3425129 | 207.1.1.60 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRRNT_2,LRR_8 | 0.56 | 48.0 | 3.21e-01 | 98.0% | 26.4% |
| 4965634 | 207.14.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › Bactofilin | 0.56 | 50.0 | 4.64e-01 | 100.0% | 80.0% |
| 3175357 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.55 | 50.0 | 4.45e-01 | 100.0% | 79.3% |
| 4025775 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.55 | 49.0 | 4.72e-01 | 99.0% | 86.1% |
| 5006686 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.54 | 45.0 | 4.35e-01 | 99.0% | 82.6% |
| 2156967 | 207.5.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C | 0.51 | 42.0 | 4.11e-01 | 98.0% | 83.8% |
D3
medium
residues 522-584_622-645_691-705
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3szeA02 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.91 | 88.0 | 5.16e-01 | 100.0% | 23.5% |
| 1rwrA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.75 | 66.0 | 4.69e-01 | 96.1% | 71.0% |
| 1hg8A00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.75 | 68.0 | 4.64e-01 | 100.0% | 50.4% |
| 4i84A00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.73 | 66.0 | 4.73e-01 | 100.0% | 55.4% |
| 4oj5C04 | 2.160.20.130 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.73 | 66.0 | 5.40e-01 | 100.0% | 61.6% |
| 1k4zA00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.72 | 62.0 | 5.32e-01 | 92.2% | 68.2% |
| 4mxnB00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.72 | 65.0 | 5.03e-01 | 100.0% | 82.3% |
| 3riqA00 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.70 | 63.0 | 3.95e-01 | 100.0% | 30.1% |
| 2b0rB00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.70 | 62.0 | 5.33e-01 | 97.1% | 72.8% |
| 1k8fA00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.69 | 61.0 | 5.24e-01 | 97.1% | 69.4% |
| 3p4gD00 | 2.160.20.160 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.68 | 62.0 | 4.37e-01 | 100.0% | 43.3% |
| 7ax1A01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.64 | 51.0 | 4.61e-01 | 87.3% | 89.4% |
| 2qyuA01 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.63 | 55.0 | 4.86e-01 | 99.0% | 82.8% |
| 1af0A01 | 2.150.10.10 | Mainly Beta › 2 Solenoid › Alkaline Protease, subunit P, domain 1 › Serralysin-like metalloprotease, C-terminal | 0.63 | 57.0 | 4.37e-01 | 100.0% | 77.5% |
| 1h6uA02 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.62 | 55.0 | 4.72e-01 | 98.0% | 87.7% |
| 4nimA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 42.0 | 3.22e-01 | 73.5% | 90.8% |
| 1hf2A02 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.58 | 49.0 | 4.90e-01 | 92.2% | 95.3% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3997590 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.77 | 45.0 | 5.65e-01 | 71.6% | 100.0% |
| 7226 | 207.2.1.15 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › TPS | 0.75 | 66.0 | 4.69e-01 | 96.1% | 71.0% |
| 3915156 | 1160.1.1.0 ↗ | beta duplicates or obligate multimers › Endoglin orphan region (OR) domain › Endoglin orphan region (OR) domain › Endoglin orphan region (OR) domain | 0.71 | 47.0 | 4.22e-01 | 75.5% | 50.4% |
| 4020264 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.71 | 62.0 | 6.22e-01 | 94.1% | 92.4% |
| 3722181 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.70 | 62.0 | 6.15e-01 | 94.1% | 92.4% |
| 3769689 | 207.14.1.3 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › DUF5585 | 0.70 | 45.0 | 5.12e-01 | 97.1% | 89.3% |
| 3781698 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.69 | 63.0 | 4.57e-01 | 100.0% | 43.6% |
| 3961601 | 207.8.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD,SufBD_N | 0.68 | 61.0 | 4.01e-01 | 100.0% | 49.3% |
| 4562874 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.67 | 58.0 | 4.41e-01 | 97.1% | 84.3% |
| 2132861 | 207.10.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Arctic yeast antifreeze protein › Arctic yeast antifreeze protein › Ice_binding | 0.66 | 57.0 | 4.49e-01 | 96.1% | 55.3% |
| 4591904 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.66 | 57.0 | 4.43e-01 | 97.1% | 87.7% |
| 3798319 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.66 | 60.0 | 5.40e-01 | 100.0% | 73.6% |
| 5033306 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.65 | 52.0 | 4.75e-01 | 89.2% | 64.4% |
| 5006685 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.64 | 57.0 | 5.10e-01 | 98.0% | 77.1% |
| 3175357 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.62 | 55.0 | 4.87e-01 | 97.1% | 93.1% |
| 4041561 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.62 | 56.0 | 4.18e-01 | 100.0% | 68.6% |
| 4968617 | 208.7.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Grass antifreeze protein › Grass antifreeze protein | 0.57 | 40.0 | 4.12e-01 | 100.0% | 76.0% |
D4
medium
residues 706-780
Domain cluster:
rep: IMGVR_UViG_3300003630_000209-3300003630-lovalP4_1001755__D47-102
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3szeA02 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.94 | 90.0 | 5.11e-01 | 100.0% | 18.9% |
| 4kh3A00 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.84 | 76.0 | 4.55e-01 | 100.0% | 15.9% |
| 1idjA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.80 | 71.0 | 4.54e-01 | 100.0% | 29.8% |
| 5olpA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.75 | 67.0 | 4.16e-01 | 100.0% | 38.9% |
| 4w8qA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.74 | 66.0 | 4.65e-01 | 100.0% | 43.6% |
| 5z9tA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.74 | 65.0 | 3.96e-01 | 100.0% | 22.5% |
| 2bm5B00 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.73 | 64.0 | 4.90e-01 | 100.0% | 43.3% |
| 5gkdA02 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.73 | 64.0 | 4.33e-01 | 100.0% | 41.4% |
| 2f3lA00 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.73 | 64.0 | 5.35e-01 | 100.0% | 58.3% |
| 2xt2B00 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.71 | 62.0 | 4.66e-01 | 100.0% | 43.3% |
| 1k8fA00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.69 | 61.0 | 4.85e-01 | 100.0% | 49.7% |
| 2yuhA01 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.68 | 58.0 | 4.48e-01 | 100.0% | 41.9% |
| 4v02C00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.67 | 56.0 | 4.82e-01 | 97.3% | 58.2% |
| 1hf2A02 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.66 | 58.0 | 5.20e-01 | 100.0% | 82.1% |
| 6dqoA00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.62 | 47.0 | 3.68e-01 | 82.7% | 77.5% |
| 2r8bA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.61 | 50.0 | 3.74e-01 | 93.3% | 50.5% |
| 3ha2A00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.60 | 46.0 | 3.62e-01 | 82.7% | 82.6% |
| 1vq8O00 | 3.100.10.10 | Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › | 0.58 | 42.0 | 3.71e-01 | 77.3% | 58.3% |
| 2xyqA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 42.0 | 2.90e-01 | 84.0% | 49.5% |
| 4c76A00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.54 | 42.0 | 3.33e-01 | 89.3% | 77.5% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1395410 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.94 | 90.0 | 5.07e-01 | 100.0% | 17.5% |
| 3265874 | 207.2.1.72 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › PF29671 | 0.90 | 84.0 | 4.77e-01 | 100.0% | 11.8% |
| 2429370 | 207.13.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix | 0.87 | 81.0 | 5.07e-01 | 100.0% | 23.7% |
| 4929387 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.86 | 73.0 | 7.53e-01 | 98.7% | 97.1% |
| 4025775 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.82 | 73.0 | 6.26e-01 | 100.0% | 62.6% |
| 3255404 | 207.2.1.72 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › PF29671 | 0.80 | 73.0 | 4.40e-01 | 100.0% | 18.9% |
| 5041137 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.79 | 64.0 | 6.65e-01 | 96.0% | 95.7% |
| 4024424 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.78 | 69.0 | 5.82e-01 | 100.0% | 60.0% |
| 3963707 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.78 | 61.0 | 6.03e-01 | 100.0% | 80.0% |
| 2410150 | 207.10.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Arctic yeast antifreeze protein › Arctic yeast antifreeze protein › Ice_binding | 0.75 | 67.0 | 4.64e-01 | 100.0% | 36.1% |
| 3598843 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.72 | 63.0 | 4.79e-01 | 100.0% | 41.6% |
| 3769689 | 207.14.1.3 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › DUF5585 | 0.72 | 52.0 | 5.22e-01 | 100.0% | 76.0% |
| 3614850 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.69 | 62.0 | 3.73e-01 | 100.0% | 15.8% |
| 3803729 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.69 | 46.0 | 4.82e-01 | 98.7% | 78.5% |
| 3708280 | 207.3.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Insect cysteine-rich antifreeze protein › Insect cysteine-rich antifreeze protein | 0.69 | 45.0 | 4.32e-01 | 100.0% | 58.8% |
| 4498099 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.68 | 56.0 | 3.90e-01 | 92.0% | 75.7% |
| 4643528 | 208.2.1.11 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain › Ice_nucleation | 0.65 | 50.0 | 4.48e-01 | 100.0% | 58.2% |
| 3684090 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.62 | 52.0 | 5.21e-01 | 96.0% | 96.0% |
| 7233 | 207.5.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C | 0.59 | 51.0 | 4.61e-01 | 100.0% | 76.6% |
D5
medium
residues 1035-1082_1129-1313
Domain cluster:
rep: ALT_09252017_20_scaffold_206_prodigal-single.1__X__X__00129__D707-949
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03797.26 best | Autotransporter | 108.1 | 8.80e-31 | 83.3% | 76.1% |
CATH (50)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kvnA02 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.86 | 78.0 | 6.99e-01 | 94.0% | 93.8% |
| 3qq2B00 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.85 | 70.0 | 6.80e-01 | 84.1% | 91.2% |
| 2qomB00 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.84 | 74.0 | 6.99e-01 | 90.1% | 91.4% |
| 1uynX00 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.80 | 75.0 | 6.98e-01 | 98.3% | 92.5% |
| 1t16A00 | 2.40.160.60 | Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) | 0.70 | 61.0 | 4.99e-01 | 93.1% | 90.6% |
| 3dwoX00 | 2.40.160.60 | Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) | 0.70 | 61.0 | 4.93e-01 | 93.1% | 90.8% |
| 4fqeA00 | 2.40.160.40 | Mainly Beta › Beta Barrel › Porin › monomeric porin ompg | 0.67 | 44.0 | 5.18e-01 | 84.1% | 90.0% |
| 4rlcA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.67 | 33.0 | 4.40e-01 | 70.8% | 83.0% |
| 2vdfA00 | 2.40.128.100 | Mainly Beta › Beta Barrel › Lipocalin › OPCA outer membrane adhesin/invasin | 0.66 | 52.0 | 5.29e-01 | 87.1% | 84.4% |
| 1i78B00 | 2.40.128.90 | Mainly Beta › Beta Barrel › Lipocalin › OMPT-like | 0.65 | 54.0 | 5.02e-01 | 86.3% | 84.0% |
| 3cslA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.65 | 49.0 | 3.56e-01 | 76.8% | 51.0% |
| 1qj8A00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.65 | 38.0 | 4.66e-01 | 94.4% | 89.9% |
| 2f1cX00 | 2.40.160.40 | Mainly Beta › Beta Barrel › Porin › monomeric porin ompg | 0.63 | 51.0 | 5.02e-01 | 84.1% | 90.5% |
| 2wjqA00 | 2.40.160.40 | Mainly Beta › Beta Barrel › Porin › monomeric porin ompg | 0.61 | 49.0 | 5.24e-01 | 88.0% | 94.1% |
| 1fepA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.60 | 46.0 | 3.44e-01 | 77.7% | 42.1% |
| 6wilA01 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.60 | 54.0 | 4.69e-01 | 94.8% | 65.8% |
| 5fokA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.60 | 48.0 | 3.62e-01 | 82.0% | 57.3% |
| 6wimA01 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.60 | 54.0 | 4.57e-01 | 94.4% | 66.1% |
| 2hdiA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.60 | 45.0 | 3.55e-01 | 76.8% | 53.2% |
| 3fidA00 | 2.40.128.140 | Mainly Beta › Beta Barrel › Lipocalin › Outer membrane protein | 0.60 | 53.0 | 4.86e-01 | 93.1% | 81.1% |
| 4c4vB02 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.60 | 43.0 | 3.64e-01 | 83.7% | 46.2% |
| 3aa0B02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.59 | 39.0 | 4.63e-01 | 74.7% | 97.4% |
| 1nqfA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.59 | 45.0 | 3.61e-01 | 76.8% | 47.1% |
| 3njtA01 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.59 | 51.0 | 4.60e-01 | 95.7% | 68.8% |
| 4epaA00 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.59 | 49.0 | 3.60e-01 | 88.4% | 60.8% |
| 3qlbA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.59 | 48.0 | 3.63e-01 | 84.5% | 54.6% |
| 1p4tA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.58 | 34.0 | 4.12e-01 | 90.1% | 85.8% |
| 5dl5A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.57 | 46.0 | 3.70e-01 | 82.0% | 63.0% |
| 2w16A03 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.57 | 44.0 | 3.35e-01 | 79.8% | 52.7% |
| 4akrA02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.57 | 35.0 | 4.29e-01 | 75.1% | 94.6% |
| 1xkwA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.57 | 45.0 | 3.42e-01 | 81.1% | 64.8% |
| 3v89A02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.57 | 44.0 | 3.23e-01 | 79.4% | 48.8% |
| 1kmoA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.57 | 46.0 | 3.53e-01 | 84.5% | 50.9% |
| 4e1sA00 | 2.40.160.160 | Mainly Beta › Beta Barrel › Porin › Inverse autotransporter, beta-domain | 0.57 | 48.0 | 4.75e-01 | 96.6% | 84.3% |
| 1by5A02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.56 | 47.0 | 3.51e-01 | 86.3% | 51.4% |
| 2f1vA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.56 | 42.0 | 4.67e-01 | 82.8% | 98.4% |
| 1af6A00 | 2.40.170.10 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › Porin, LamB type | 0.55 | 49.0 | 3.94e-01 | 93.6% | 94.8% |
| 4k3bA06 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.54 | 44.0 | 3.75e-01 | 84.1% | 91.9% |
| 2rckA01 | 3.15.10.30 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › TULIP domain | 0.54 | 38.0 | 3.98e-01 | 70.0% | 96.8% |
| 1bxwA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.54 | 38.0 | 4.35e-01 | 80.7% | 97.1% |
| 1bt9A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.53 | 46.0 | 3.99e-01 | 89.7% | 91.5% |
| 4afkA00 | 2.40.160.100 | Mainly Beta › Beta Barrel › Porin › | 0.53 | 46.0 | 3.70e-01 | 89.7% | 67.9% |
| 2ichA01 | 2.40.370.10 | Mainly Beta › Beta Barrel › AttH-like fold › AttH-like domain | 0.52 | 35.0 | 3.93e-01 | 94.8% | 86.0% |
| 2f86B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 27.0 | 3.51e-01 | 88.8% | 87.6% |
| 6wulB01 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.52 | 42.0 | 3.64e-01 | 83.7% | 89.7% |
| 8p97A01 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.52 | 47.0 | 3.42e-01 | 96.1% | 73.0% |
| 1a0sP00 | 2.40.170.10 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › Porin, LamB type | 0.52 | 47.0 | 3.85e-01 | 96.6% | 93.7% |
| 1fw3A00 | 2.40.230.10 | Mainly Beta › Beta Barrel › Outer membrane phospholipase (ompla); Chain C › Phospholipase A1 | 0.51 | 43.0 | 4.19e-01 | 87.1% | 98.8% |
| 2porA00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.51 | 41.0 | 3.72e-01 | 83.3% | 63.8% |
| 3dzmB00 | 2.40.160.70 | Mainly Beta › Beta Barrel › Porin › outer membrane protein from Thermus thermophilus HB27. | 0.50 | 40.0 | 4.21e-01 | 81.5% | 97.5% |
ECOD (81)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4377115 | 5084.3.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter | 0.98 | 96.0 | 5.93e-01 | 100.0% | 26.3% |
| 3979319 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.90 | 84.0 | 7.61e-01 | 95.3% | 92.5% |
| 4009884 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.90 | 87.0 | 7.80e-01 | 100.0% | 92.7% |
| 4669999 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.89 | 87.0 | 7.76e-01 | 100.0% | 92.8% |
| 4234836 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.89 | 86.0 | 7.68e-01 | 100.0% | 93.4% |
| 4547630 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.89 | 81.0 | 7.43e-01 | 94.4% | 92.4% |
| 4010029 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.89 | 86.0 | 7.67e-01 | 100.0% | 93.1% |
| 3386238 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.88 | 85.0 | 7.49e-01 | 100.0% | 93.8% |
| 4521584 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.88 | 85.0 | 7.45e-01 | 100.0% | 93.4% |
| 4450761 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.87 | 84.0 | 7.22e-01 | 100.0% | 91.0% |
| 3979621 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.87 | 82.0 | 7.33e-01 | 97.0% | 93.1% |
| 3978611 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.87 | 85.0 | 7.43e-01 | 100.0% | 92.2% |
| 4136508 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.87 | 82.0 | 7.17e-01 | 98.7% | 94.2% |
| 3971932 | 5084.3.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter | 0.86 | 82.0 | 5.83e-01 | 100.0% | 49.4% |
| 4217278 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.86 | 79.0 | 6.95e-01 | 96.1% | 93.8% |
| 4419134 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.85 | 82.0 | 7.49e-01 | 100.0% | 97.6% |
| 4345340 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.85 | 77.0 | 7.02e-01 | 94.4% | 93.0% |
| 4278291 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.85 | 80.0 | 7.16e-01 | 99.1% | 93.3% |
| 4356082 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.85 | 80.0 | 7.01e-01 | 99.1% | 93.3% |
| 4191031 | 5084.3.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter | 0.85 | 81.0 | 7.23e-01 | 100.0% | 92.9% |
| 4339003 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.84 | 78.0 | 7.04e-01 | 96.1% | 93.3% |
| 4162922 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.84 | 81.0 | 7.21e-01 | 100.0% | 93.2% |
| 4304754 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.84 | 81.0 | 7.26e-01 | 100.0% | 93.1% |
| 4602917 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.83 | 80.0 | 6.96e-01 | 100.0% | 87.3% |
| 4195943 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.83 | 78.0 | 6.88e-01 | 99.1% | 93.6% |
| 139764 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.81 | 79.0 | 7.39e-01 | 100.0% | 91.9% |
| 3964572 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.81 | 77.0 | 7.08e-01 | 100.0% | 89.4% |
| 885 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.80 | 75.0 | 6.98e-01 | 98.3% | 92.5% |
| 4490044 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.78 | 74.0 | 6.78e-01 | 97.0% | 93.0% |
| 3965061 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.75 | 71.0 | 6.84e-01 | 100.0% | 91.5% |
| 2103480 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.74 | 63.0 | 5.76e-01 | 88.4% | 73.2% |
| 3973062 | 5084.5.4.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein | 0.73 | 63.0 | 5.24e-01 | 91.8% | 90.7% |
| 4618904 | 5084.5.1.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB | 0.65 | 60.0 | 5.06e-01 | 98.7% | 67.6% |
| 4417262 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.64 | 41.0 | 4.76e-01 | 94.8% | 87.4% |
| 4622073 | 5084.5.4.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM | 0.64 | 57.0 | 5.05e-01 | 92.7% | 99.7% |
| 4571005 | 5084.5.1.66 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › DUF2490 | 0.64 | 53.0 | 5.67e-01 | 89.7% | 97.0% |
| 4135567 | 5084.5.1.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB | 0.64 | 59.0 | 4.93e-01 | 98.7% | 67.6% |
| 3980016 | 5084.1.1.10 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl | 0.63 | 36.0 | 4.46e-01 | 88.0% | 90.0% |
| 3967762 | 5084.5.1.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB | 0.63 | 57.0 | 4.81e-01 | 96.1% | 66.3% |
| 4130771 | 5084.1.1.10 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl | 0.62 | 39.0 | 4.34e-01 | 93.1% | 77.3% |
| 4393174 | 5084.5.1.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB | 0.62 | 57.0 | 4.79e-01 | 97.4% | 68.4% |
| 4581432 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.62 | 45.0 | 5.07e-01 | 85.0% | 96.7% |
| 3388060 | 5084.1.1.10 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl | 0.61 | 43.0 | 4.73e-01 | 94.0% | 87.3% |
| 1758278 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.61 | 46.0 | 3.46e-01 | 77.7% | 50.5% |
| 3837948 | 5084.1.1.15 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP | 0.60 | 41.0 | 4.54e-01 | 99.6% | 84.7% |
| 3964794 | 5084.5.4.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM | 0.60 | 48.0 | 4.83e-01 | 83.7% | 96.7% |
| 200993 | 5084.9.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Lipid A deacylase LpxR › Lipid A deacylase LpxR › LpxR | 0.60 | 53.0 | 4.86e-01 | 93.1% | 81.1% |
| 4662377 | 5084.5.4.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM | 0.60 | 53.0 | 4.83e-01 | 92.7% | 90.6% |
| 1760802 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.59 | 45.0 | 3.50e-01 | 76.4% | 52.2% |
| 3965708 | 5084.5.4.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM | 0.59 | 48.0 | 4.80e-01 | 84.1% | 91.7% |
| 4546669 | 5084.5.1.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB | 0.59 | 55.0 | 4.56e-01 | 99.1% | 68.5% |
| 3964588 | 5084.5.1.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB | 0.59 | 47.0 | 4.23e-01 | 87.6% | 60.8% |
| 1883909 | 5084.5.3.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel | 0.59 | 45.0 | 3.22e-01 | 77.7% | 46.1% |
| 3971477 | 5084.5.3.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel | 0.59 | 48.0 | 3.51e-01 | 85.0% | 89.1% |
| 1828692 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.58 | 45.0 | 3.34e-01 | 78.5% | 50.7% |
| 4870099 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.58 | 48.0 | 3.57e-01 | 85.4% | 96.9% |
| 4197411 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.58 | 43.0 | 4.63e-01 | 96.6% | 87.5% |
| None | — | 0.58 | 51.0 | 5.13e-01 | 94.0% | 95.4% | |
| 4683047 | 5084.1.1.29 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PF27340 | 0.57 | 35.0 | 4.13e-01 | 96.6% | 84.2% |
| 4301927 | 5084.1.1.10 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl | 0.57 | 46.0 | 4.67e-01 | 95.3% | 84.7% |
| 4591311 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.57 | 46.0 | 3.25e-01 | 85.0% | 41.6% |
| 1760440 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.57 | 46.0 | 3.59e-01 | 84.5% | 45.6% |
| 3838975 | 5084.1.1.15 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP | 0.57 | 39.0 | 4.38e-01 | 96.1% | 88.1% |
| 4655968 | 5084.1.1.10 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl | 0.56 | 39.0 | 4.26e-01 | 70.8% | 84.2% |
| 4591679 | 5084.5.1.18 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › BCSC_C | 0.56 | 50.0 | 4.33e-01 | 95.7% | 86.4% |
| 4371754 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.55 | 47.0 | 3.45e-01 | 88.4% | 88.7% |
| 3838382 | 5084.1.1.15 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP | 0.55 | 43.0 | 4.19e-01 | 97.9% | 73.4% |
| 2321077 | 5084.5.1.11 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 | 0.55 | 47.0 | 4.19e-01 | 89.7% | 67.1% |
| 4501883 | 5084.5.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 | 0.55 | 44.0 | 3.68e-01 | 82.4% | 92.5% |
| 4339571 | 5084.5.4.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein | 0.54 | 49.0 | 3.91e-01 | 94.8% | 60.7% |
| 3972370 | 5084.5.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 | 0.54 | 44.0 | 3.69e-01 | 84.1% | 53.6% |
| 2724175 | 5084.5.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 | 0.54 | 43.0 | 4.24e-01 | 83.7% | 82.0% |
| 3838622 | 5084.1.1.15 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP | 0.54 | 43.0 | 4.49e-01 | 97.4% | 90.1% |
| 4299005 | 5084.1.1.21 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › TSA | 0.53 | 37.0 | 4.11e-01 | 83.3% | 86.8% |
| 3716267 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.52 | 34.0 | 3.01e-01 | 89.7% | 44.5% |
| 200662 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.52 | 41.0 | 4.30e-01 | 81.5% | 97.6% |
| 3839188 | 5084.1.1.15 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP | 0.52 | 42.0 | 4.22e-01 | 85.0% | 98.7% |
| 3840004 | 5084.1.1.15 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP | 0.51 | 42.0 | 4.45e-01 | 95.7% | 93.4% |
| 3839919 | 5084.1.1.15 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP | 0.51 | 41.0 | 4.30e-01 | 97.4% | 90.0% |
| 3964096 | 5084.1.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Opacity | 0.51 | 37.0 | 4.26e-01 | 88.0% | 98.3% |
| 3838398 | 5084.1.1.15 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP | 0.50 | 36.0 | 4.01e-01 | 85.4% | 93.9% |
D6
medium
residues 1083-1128_1314-1335
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qomB00 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.96 | 93.0 | 5.88e-01 | 100.0% | 91.8% |
| 6lofA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.69 | 62.0 | 4.57e-01 | 95.6% | 58.6% |
| 6wimA01 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.69 | 51.0 | 3.17e-01 | 77.9% | 45.6% |
| 6qwrA01 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.55 | 46.0 | 3.49e-01 | 100.0% | 92.6% |
| 4tw1B00 | 2.70.240.10 | Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA | 0.53 | 39.0 | 2.69e-01 | 82.4% | 86.2% |
| 1zvfB01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 31.0 | 2.36e-01 | 95.6% | 23.8% |
| 2hevF00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 38.0 | 3.13e-01 | 85.3% | 42.1% |
| 2w3sB04 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.51 | 45.0 | 3.19e-01 | 100.0% | 65.7% |
| 1m6uA00 | 2.60.40.1390 | Mainly Beta › Sandwich › Immunoglobulin-like › NDT80 DNA-binding domain | 0.50 | 42.0 | 2.93e-01 | 100.0% | 94.3% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 139764 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.98 | 94.0 | 5.97e-01 | 100.0% | 81.6% |
| 3785861 | 5.1.2.20 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › BMT | 0.66 | 48.0 | 2.89e-01 | 79.4% | 32.9% |
| 3268685 | 11.1.1.9 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N | 0.60 | 49.0 | 3.81e-01 | 92.6% | 94.2% |
| 3397147 | 11.1.1.9 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N | 0.58 | 44.0 | 3.41e-01 | 80.9% | 73.8% |
| 4886985 | 7523.1.1.16 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › DctP | 0.56 | 37.0 | 3.03e-01 | 89.7% | 36.8% |
| 3654114 | 2484.1.1.26 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi | 0.54 | 39.0 | 2.77e-01 | 76.5% | 67.1% |
| 5074082 | 11.1.1.9 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N | 0.53 | 40.0 | 3.22e-01 | 83.8% | 98.6% |
| 3717787 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.52 | 40.0 | 2.58e-01 | 88.2% | 32.1% |
| 3434245 | 9.3.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › DUF2921_N | 0.52 | 43.0 | 3.31e-01 | 94.1% | 91.8% |
| 3223309 | 11.1.1.934 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N, Arrestin_C | 0.52 | 42.0 | 2.95e-01 | 98.5% | 49.1% |
| 4991099 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.50 | 28.0 | 2.63e-01 | 100.0% | 40.0% |