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AF155037.1__AAD43542.1__X__00006

Bact-Vir

AF155037.1__AAD43542.1__X__00006

Identity

Accession:
AF155037 ↗
Kingdom:
phage

Quality

91.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-79
PDB
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3edvA02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.81 73.0 5.46e-01 100.0% 58.5%
2odvA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.81 73.0 6.39e-01 100.0% 97.3%
5vjcA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.81 66.0 4.46e-01 90.8% 25.6%
2oduA02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.79 70.0 6.30e-01 100.0% 96.2%
4hwdD00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.78 67.0 6.41e-01 97.4% 100.0%
2b0hA01 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.78 69.0 5.82e-01 100.0% 71.9%
4dloB02 1.25.40.610 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.78 67.0 5.82e-01 96.1% 70.1%
3k3oA02 1.20.58.1360 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.78 68.0 6.62e-01 96.1% 100.0%
4hwhE00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.77 68.0 6.53e-01 98.7% 98.9%
1owaA02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.76 68.0 6.11e-01 100.0% 97.2%
1j1jA02 1.20.58.200 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 0.76 66.0 6.43e-01 97.4% 95.3%
2hroA02 1.10.274.10 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › PtsI, HPr-binding domain 0.76 53.0 4.38e-01 72.4% 78.9%
1hciA03 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.75 67.0 5.78e-01 100.0% 95.0%
2e9xD01 1.20.58.1030 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.75 58.0 4.77e-01 82.9% 52.6%
1s35A01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.75 62.0 5.72e-01 93.4% 100.0%
2h7oA01 1.20.120.1330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Rac1-binding domain, N-terminal GTPase binding subdomain 0.74 62.0 5.38e-01 94.7% 60.2%
1lvfB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.74 63.0 5.77e-01 97.4% 100.0%
1yg2A02 6.10.140.190 Special › Helix non-globular › Helix Hairpins › 0.73 53.0 5.04e-01 76.3% 95.6%
1j5wA02 1.20.58.180 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Class II aaRS and biotin synthetases; domain 2 0.73 61.0 6.09e-01 90.8% 93.5%
1m62A00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.73 65.0 6.22e-01 98.7% 93.1%
4ofzA01 1.20.58.1800 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.73 62.0 5.50e-01 96.1% 75.2%
3anwB00 1.20.58.2050 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.73 66.0 5.11e-01 100.0% 64.2%
1ugoA00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.72 62.0 5.72e-01 96.1% 84.8%
5figA00 1.20.1270.360 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.72 60.0 5.52e-01 93.4% 75.0%
1s35A02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.72 61.0 5.46e-01 96.1% 92.7%
4rngC00 1.20.1280.290 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.71 58.0 5.71e-01 89.5% 92.8%
1zymA02 1.10.274.10 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › PtsI, HPr-binding domain 0.69 52.0 4.32e-01 78.9% 56.3%
8ek4A01 1.20.120.20 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein 0.68 60.0 5.06e-01 100.0% 94.0%
5dqqA01 1.20.120.350 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C 0.67 57.0 4.74e-01 92.1% 77.3%
4qndA00 1.20.1280.290 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.67 55.0 5.10e-01 92.1% 82.5%
1yo7A00 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.67 56.0 4.95e-01 98.7% 75.0%
2yfaA02 1.20.1440.210 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.66 55.0 4.88e-01 96.1% 70.7%
4l8iB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.66 55.0 4.87e-01 93.4% 95.5%
2x6hA01 1.25.40.70 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Phosphatidylinositol 3-kinase, accessory domain (PIK) 0.62 49.0 3.69e-01 85.5% 41.4%
1dliA03 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.62 49.0 4.68e-01 88.2% 100.0%
4bpxD00 1.20.930.80 Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › 0.62 55.0 4.03e-01 100.0% 80.8%
4kb2A01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.61 53.0 4.75e-01 100.0% 100.0%
2j9wB00 1.20.120.1130 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Vps28 C-terminal domain 0.60 51.0 4.75e-01 97.4% 76.8%
4nooB00 1.10.8.1160 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.58 53.0 4.90e-01 100.0% 94.7%
1f5oA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.58 46.0 3.76e-01 88.2% 85.9%
2jifA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.58 50.0 4.02e-01 97.4% 63.0%
7dswA01 1.20.1530.20 Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › 0.58 51.0 3.21e-01 98.7% 21.0%
1zcdA00 1.20.1530.10 Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › Na+/H+ antiporter like domain 0.57 48.0 3.13e-01 96.1% 52.1%
1ashA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.57 44.0 3.65e-01 85.5% 93.9%
2wzkA03 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.56 45.0 4.08e-01 90.8% 75.5%
5jc3A02 1.20.1320.30 Mainly Alpha › Up-down Bundle › phosphoenolpyruvate carboxylase, domain 3 › 0.55 46.0 4.00e-01 97.4% 65.1%
5jajA03 1.20.1320.30 Mainly Alpha › Up-down Bundle › phosphoenolpyruvate carboxylase, domain 3 › 0.55 43.0 3.85e-01 97.4% 58.6%
5u9nB00 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.54 49.0 4.17e-01 100.0% 67.5%
2h4pA01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.54 46.0 3.22e-01 93.4% 80.2%
1zc6A02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.54 46.0 3.65e-01 94.7% 62.8%
7e5aB02 1.20.1000.10 Mainly Alpha › Up-down Bundle › Signaling Protein - Interferon-induced Guanylate-binding Protein 1; Chain A, domain 1 › Guanylate-binding protein, C-terminal domain 0.52 46.0 3.65e-01 100.0% 82.9%
2no4A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.51 39.0 3.98e-01 80.3% 88.0%
3cxbA03 1.10.1740.30 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › Secreted effector protein SifA helical domain 0.50 45.0 4.46e-01 98.7% 96.3%
ECOD (52)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3738283 109.4.1.356 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans 0.89 82.0 4.90e-01 98.7% 17.0%
2485668 7025.1.1.2 alpha bundles › LIN9-LIN52 heterodimer › LIN9-LIN52 heterodimer › LIN9-LIN52 heterodimer › LIN9_C 0.87 60.0 5.81e-01 71.1% 67.9%
3929469 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.84 72.0 5.19e-01 96.1% 35.4%
3776654 109.4.1.33 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT 0.83 65.0 3.67e-01 84.2% 8.7%
4355519 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.82 73.0 4.90e-01 96.1% 28.0%
3639020 109.4.1.170 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CLASP_N 0.82 72.0 4.22e-01 96.1% 13.0%
3462100 604.1.1.102 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › DUF8324 0.82 75.0 6.35e-01 100.0% 93.3%
3764093 6171.1.1.1 alpha bundles › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases › JHD 0.81 73.0 6.71e-01 97.4% 92.6%
3341807 604.3.1.1 alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG 0.81 72.0 6.39e-01 100.0% 80.0%
3216372 109.4.1.933 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_Trm732 0.80 70.0 4.15e-01 96.1% 14.1%
3784566 604.1.1.191 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PF29057 0.78 67.0 6.12e-01 93.4% 94.0%
3497418 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.78 69.0 6.32e-01 100.0% 92.0%
3233740 604.29.1.1 alpha bundles › Spectrin repeat-like › Trehalose-6-phosphate phosphatase N-terminal helical bundle › Trehalose-6-phosphate phosphatase N-terminal helical bundle › T6PP_N 0.78 67.0 6.02e-01 96.1% 87.6%
5011187 4163.1.1.1 alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 0.78 62.0 5.36e-01 85.5% 60.9%
3952930 604.6.1.28 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › PF30641 0.78 69.0 6.29e-01 98.7% 92.0%
3483996 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.77 70.0 6.15e-01 100.0% 95.5%
3530149 6171.1.1.1 alpha bundles › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases › JHD 0.77 70.0 6.06e-01 100.0% 80.0%
4032384 604.3.1.0 alpha bundles › Spectrin repeat-like › BAG domain › BAG domain 0.76 65.0 6.47e-01 96.1% 100.0%
4236831 604.6.1.50 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › DUF2524 0.76 62.0 6.09e-01 86.8% 100.0%
3284612 604.10.1.10 alpha bundles › Spectrin repeat-like › Enzyme IIa from lactose specific PTS, IIa-lac › Enzyme IIa from lactose specific PTS, IIa-lac › PF30641 0.76 67.0 6.16e-01 100.0% 94.0%
5067623 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.76 65.0 5.83e-01 97.4% 98.2%
4227779 604.5.1.0 alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) 0.75 66.0 4.79e-01 97.4% 49.3%
3585432 604.1.1.98 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_Anc-1 0.75 66.0 5.81e-01 100.0% 90.4%
3253938 601.1.1.0 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.75 64.0 5.55e-01 93.4% 75.7%
3269731 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.75 62.0 5.43e-01 90.8% 93.9%
4267497 604.5.1.0 alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) 0.75 65.0 4.74e-01 97.4% 48.6%
2992201 6171.1.1.1 alpha bundles › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases › JHD 0.75 68.0 5.96e-01 100.0% 83.6%
3467430 109.4.1.843 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › EFR3_ARM 0.75 62.0 3.86e-01 93.4% 26.7%
3484031 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.75 66.0 5.49e-01 100.0% 80.0%
4998508 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.74 64.0 4.77e-01 96.1% 42.1%
5077201 3281.1.1.1 alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M 0.74 66.0 4.04e-01 100.0% 34.6%
3431415 6155.1.1.6 alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › DUF2921 0.74 65.0 6.34e-01 100.0% 94.1%
3960319 4121.1.1.1 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.73 64.0 5.00e-01 100.0% 68.8%
4169660 604.27.1.0 alpha bundles › Spectrin repeat-like › Triple-helical domain in insecticidal protein Cry1Ac › Triple-helical domain in insecticidal protein Cry1Ac 0.73 59.0 6.13e-01 89.5% 97.1%
5077923 5082.1.1.1 alpha bundles › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation_efflux 0.72 63.0 4.75e-01 97.4% 78.9%
3760336 5054.1.1.2 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans 0.72 66.0 5.01e-01 100.0% 58.2%
4056158 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.72 61.0 5.50e-01 97.4% 84.5%
5082279 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.72 63.0 5.44e-01 98.7% 73.3%
5070202 109.4.1.210 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19 0.70 61.0 4.74e-01 100.0% 44.1%
3212957 109.3.1.393 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29588 0.69 60.0 4.70e-01 100.0% 77.6%
3560925 604.1.1.20 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › AKNA 0.69 60.0 5.36e-01 100.0% 99.1%
4345155 604.27.1.1 alpha bundles › Spectrin repeat-like › Triple-helical domain in insecticidal protein Cry1Ac › Triple-helical domain in insecticidal protein Cry1Ac › Endotoxin_C2 0.69 60.0 6.11e-01 98.7% 100.0%
4999121 3281.1.1.1 alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M 0.68 60.0 3.84e-01 100.0% 44.5%
3719674 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.67 57.0 4.28e-01 98.7% 64.4%
4927629 3684.1.1.0 alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like 0.67 58.0 5.07e-01 100.0% 76.7%
3470962 6155.1.1.2 alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop 0.67 56.0 5.47e-01 93.4% 94.1%
4959463 6155.1.1.2 alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop 0.65 56.0 5.57e-01 96.1% 100.0%
5055960 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.64 52.0 4.55e-01 92.1% 79.2%
4227989 604.9.1.1 alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p 0.62 55.0 5.24e-01 100.0% 87.6%
3931393 632.1.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain 0.59 52.0 4.37e-01 97.4% 64.8%
4938672 632.11.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.55 46.0 4.81e-01 92.1% 100.0%
5060017 632.11.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.53 42.0 4.55e-01 92.1% 100.0%