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AF195902.3__ABY26970.1__LJ771_008__00008

Bact-Vir

AF195902.3__ABY26970.1__LJ771_008__00008

Identity

Accession:
AF195902 ↗
Kingdom:
phage

Quality

90.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Lactobacillus_prophage_Lj771

TaxID: 139871

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 26-118
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF07083.17 best DUF1351 61.2 1.70e-16 98.9% 42.9%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4081848 7013.1.1.1 ↗ alpha bundles › Ribosome assembly factor Efg1-like › Ribosome assembly factor Efg1-like › Ribosome assembly factor Efg1-like › Efg1 0.67 52.0 3.93e-01 81.7% 38.6%
D2 medium residues 119-253
PDB
Domain cluster: rep: MK448746.1__QBX17886.1__Javan383_0041__00018__D127-227
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF07083.17 best DUF1351 50.6 3.00e-13 77.0% 49.5%
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1xvhB00 1.20.120.1850 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Ebh helix bundles repeating unit (S and A modules) 0.53 37.0 3.97e-01 71.9% 95.8%
3caxA01 1.20.120.520 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nmb1532 protein domain like 0.52 37.0 3.20e-01 74.1% 71.0%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3654060 3722.1.1.1 ↗ alpha bundles › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › MAP65_ASE1 0.65 48.0 4.01e-01 77.0% 55.9%
3272278 3722.1.1.0 ↗ alpha bundles › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain 0.61 47.0 3.73e-01 81.5% 70.7%
3949328 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.58 35.0 3.86e-01 83.0% 73.6%
3407094 4323.1.1.0 ↗ alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C 0.57 38.0 3.67e-01 80.0% 60.0%