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AF254763.1__AAF82483.1__X__00001
Bact-VirAF254763.1__AAF82483.1__X__00001
Identity
- Accession:
- AF254763 ↗
- Kingdom:
- phage
Quality
81.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-130
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1lqlA01 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.78 | 18.0 | 3.88e-01 | 90.6% | 100.0% |
| 3cxbA01 | 3.30.2440.10 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein SifA fold › Secreted effector protein SifA | 0.70 | 57.0 | 6.04e-01 | 88.3% | 94.8% |
| 5dikA00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.57 | 30.0 | 3.23e-01 | 80.5% | 56.2% |
| 3k2tA01 | 3.30.505.50 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain | 0.55 | 22.0 | 3.50e-01 | 93.0% | 100.0% |
| 3qokA02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.53 | 29.0 | 3.29e-01 | 75.8% | 69.1% |
| 2chnB03 | 1.20.58.460 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like | 0.53 | 41.0 | 3.72e-01 | 83.6% | 91.1% |
| 6iikB00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.52 | 41.0 | 3.05e-01 | 85.2% | 89.2% |
| 2fbnA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.51 | 36.0 | 3.46e-01 | 72.7% | 77.8% |
| 5mi7A03 | 1.20.58.460 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like | 0.51 | 40.0 | 3.23e-01 | 85.2% | 61.0% |
| 1t9kA01 | 1.20.120.420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 | 0.50 | 40.0 | 3.96e-01 | 86.7% | 87.1% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3975056 | 241.13.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › N-terminal domain of secreted effector protein sifA › N-terminal domain of secreted effector protein sifA | 0.99 | 97.0 | 9.71e-01 | 100.0% | 98.5% |
| 3976197 | 241.13.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › N-terminal domain of secreted effector protein sifA › N-terminal domain of secreted effector protein sifA › Sif | 0.92 | 77.0 | 8.19e-01 | 86.7% | 98.3% |
| 185328 | 241.13.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › N-terminal domain of secreted effector protein sifA › N-terminal domain of secreted effector protein sifA › Sif | 0.70 | 57.0 | 6.02e-01 | 88.3% | 94.8% |
| 3844118 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 42.0 | 3.52e-01 | 83.6% | 58.3% |
| 2705299 | 4266.1.1.4 ↗ | alpha bundles › Hyaluronidase domain-like › Hyaluronidase post-catalytic domain-like › Hyaluronidase post-catalytic domain-like › Glyco_hydro_84_hel | 0.52 | 40.0 | 3.79e-01 | 82.0% | 93.0% |
| 4090147 | 633.21.1.22 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › COPI_assoc | 0.52 | 38.0 | 3.65e-01 | 75.8% | 85.3% |
| 54358 | 4266.1.1.0 ↗ | alpha bundles › Hyaluronidase domain-like › Hyaluronidase post-catalytic domain-like › Hyaluronidase post-catalytic domain-like | 0.52 | 40.0 | 3.79e-01 | 81.2% | 94.8% |
| 4124063 | 9.7.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Metalloprotease inhibitor › Metalloprotease inhibitor › Inh | 0.51 | 31.0 | 3.62e-01 | 86.7% | 85.6% |
| 4518121 | 9.7.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Metalloprotease inhibitor › Metalloprotease inhibitor › Inh | 0.51 | 31.0 | 3.43e-01 | 84.4% | 76.0% |
| 3236014 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.51 | 40.0 | 3.00e-01 | 82.8% | 91.7% |
D2
high
residues 154-320
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF15645.14 best | Tox-PLDMTX | 156.5 | 5.50e-46 | 81.4% | 100.0% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4g29A00 | 3.10.670.10 | Alpha Beta › Roll › Secreted effector protein ssei fold › Secreted effector protein ssei. | 0.99 | 91.0 | 9.21e-01 | 95.8% | 94.6% |
| 2ebfX01 | 3.10.670.10 | Alpha Beta › Roll › Secreted effector protein ssei fold › Secreted effector protein ssei. | 0.75 | 60.0 | 5.71e-01 | 98.2% | 72.5% |
| 2qsdA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.56 | 25.0 | 3.67e-01 | 90.4% | 98.5% |
| 3isrA01 | 3.10.620.30 | Alpha Beta › Roll › C8orf32 fold › | 0.56 | 42.0 | 4.04e-01 | 89.2% | 69.2% |
| 6pfzD02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 40.0 | 3.50e-01 | 81.4% | 71.2% |
| 1cv8A00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.51 | 37.0 | 3.69e-01 | 74.9% | 99.4% |
| 3kenA00 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.50 | 35.0 | 2.80e-01 | 70.1% | 85.6% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 185758 | 219.1.1.55 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Tox-PLDMTX | 0.99 | 93.0 | 9.29e-01 | 95.8% | 94.7% |
| 7410 | 219.1.1.64 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › PMT_C3 | 0.75 | 60.0 | 5.72e-01 | 98.2% | 72.9% |
| 3972374 | 219.1.1.96 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_i_TM | 0.67 | 40.0 | 4.60e-01 | 77.2% | 79.2% |
| 3947087 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.63 | 42.0 | 4.37e-01 | 77.8% | 70.6% |
| 5029261 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.63 | 48.0 | 5.09e-01 | 79.0% | 98.7% |
| 5030191 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.63 | 40.0 | 4.83e-01 | 74.3% | 93.9% |
| 4989205 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.61 | 46.0 | 4.50e-01 | 86.8% | 72.2% |
| 2532980 | 219.1.1.53 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Vasohibin | 0.61 | 52.0 | 4.49e-01 | 91.0% | 66.1% |
| 5064712 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.60 | 44.0 | 4.39e-01 | 86.8% | 73.1% |
| 4676513 | 219.1.1.76 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 | 0.57 | 48.0 | 4.66e-01 | 89.2% | 80.6% |
| 5077834 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.57 | 48.0 | 4.03e-01 | 92.2% | 53.9% |