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AF323670.1__AAK08380.1__X__00032

Bact-Vir

AF323670.1__AAK08380.1__X__00032

Identity

Accession:
AF323670 ↗
Kingdom:
phage

Quality

88.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-67
PDB
Domain cluster: representative
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF13560.13 HTH_31 29.2 1.30e-06 96.8% 82.8%
PF01381.29 best HTH_3 33.4 5.30e-08 96.8% 98.2%
CATH (38)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3op9A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.92 78.0 7.61e-01 100.0% 83.8%
2r1jL00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.92 78.0 7.68e-01 100.0% 86.4%
3bs3A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.90 76.0 7.83e-01 100.0% 95.0%
2kpjA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.90 76.0 7.32e-01 100.0% 81.4%
3f51C00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.89 75.0 6.61e-01 100.0% 63.3%
3u3wA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.89 74.0 7.15e-01 100.0% 81.2%
2bnmA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.89 76.0 7.19e-01 100.0% 78.4%
1r69A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.88 73.0 7.36e-01 100.0% 88.9%
1b0nA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.88 75.0 6.28e-01 100.0% 56.3%
1y7yA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.87 72.0 7.01e-01 100.0% 82.6%
6rnzA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.86 72.0 7.16e-01 100.0% 86.4%
4jcyA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.85 75.0 6.57e-01 100.0% 66.3%
2awiA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.85 69.0 6.81e-01 100.0% 83.6%
3kxaA02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.84 70.0 6.91e-01 100.0% 86.4%
1y9qA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.83 69.0 6.21e-01 100.0% 67.1%
3zhiA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.83 74.0 7.06e-01 100.0% 90.4%
3qf3D00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.82 73.0 5.77e-01 100.0% 53.9%
2ofyA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.82 67.0 6.47e-01 100.0% 80.0%
6b9sB02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.82 66.0 6.31e-01 98.4% 76.7%
8dtqA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.82 73.0 6.60e-01 100.0% 74.4%
2ewtA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.81 69.0 6.65e-01 100.0% 83.1%
1lliA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.81 72.0 6.34e-01 100.0% 68.5%
1au7A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.80 65.0 6.23e-01 88.9% 84.7%
3pxpA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.78 71.0 6.22e-01 100.0% 75.3%
2wusS00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.76 68.0 6.23e-01 100.0% 79.3%
3fymA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 67.0 6.15e-01 100.0% 80.5%
2ef8A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 67.0 6.07e-01 100.0% 81.0%
3b7hA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 61.0 5.78e-01 100.0% 76.3%
1dw9A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 62.0 5.62e-01 100.0% 70.1%
1g3nC01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.62 50.0 4.08e-01 88.9% 78.3%
3sdgA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.62 37.0 4.30e-01 93.7% 88.1%
3s6jE02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.61 45.0 4.42e-01 79.4% 82.6%
3kbbA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.59 44.0 4.31e-01 82.5% 91.4%
3h4cA02 1.10.472.110 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › 0.55 42.0 3.67e-01 90.5% 80.9%
8e9gE01 1.10.10.1590 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E 0.55 38.0 3.80e-01 92.1% 71.4%
1aisB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.54 44.0 3.96e-01 96.8% 81.9%
2mgqA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.52 37.0 3.68e-01 96.8% 72.1%
1pjrA02 1.10.10.160 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.50 38.0 3.75e-01 88.9% 98.6%
ECOD (56)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3953562 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.95 82.0 7.90e-01 100.0% 81.4%
3282671 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.95 81.0 7.69e-01 100.0% 78.1%
3587619 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.93 82.0 7.88e-01 100.0% 84.3%
4425759 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.93 79.0 6.41e-01 100.0% 51.8%
4380868 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.93 79.0 6.38e-01 100.0% 51.8%
3588760 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.92 79.0 6.49e-01 100.0% 54.3%
3588754 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.92 80.0 5.43e-01 100.0% 29.7%
4038777 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.91 77.0 6.63e-01 100.0% 60.0%
5003294 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.91 77.0 7.23e-01 100.0% 76.0%
3976255 101.1.4.17 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.91 77.0 7.22e-01 100.0% 76.0%
4034513 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.90 76.0 7.81e-01 100.0% 95.0%
4031838 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.90 84.0 7.64e-01 100.0% 78.8%
4678741 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.90 77.0 7.26e-01 100.0% 77.3%
3972208 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.90 76.0 7.14e-01 100.0% 76.0%
3965549 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.90 76.0 7.14e-01 100.0% 76.0%
3283427 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.90 83.0 6.39e-01 100.0% 53.1%
5083215 101.1.4.18 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.90 76.0 7.53e-01 100.0% 87.7%
4061717 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.89 77.0 6.32e-01 100.0% 55.2%
1181610 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.89 74.0 7.11e-01 100.0% 80.0%
3944738 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.88 74.0 6.95e-01 100.0% 76.0%
4585952 101.1.4.17 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.88 75.0 7.23e-01 100.0% 82.9%
3277653 101.1.4.18 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.88 76.0 6.83e-01 100.0% 69.4%
3978391 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.88 73.0 7.09e-01 100.0% 81.4%
2888862 101.1.4.18 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.88 75.0 7.40e-01 100.0% 87.9%
3967226 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.87 72.0 6.98e-01 100.0% 80.0%
3283172 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.87 80.0 5.17e-01 100.0% 27.1%
140568 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.87 73.0 7.10e-01 100.0% 83.8%
3972740 101.1.4.17 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.87 74.0 7.36e-01 100.0% 89.2%
2581392 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.87 73.0 6.98e-01 100.0% 80.3%
4952242 101.1.4.17 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.87 72.0 6.98e-01 100.0% 81.4%
3588965 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.86 70.0 5.51e-01 100.0% 44.4%
1145736 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.86 78.0 6.50e-01 100.0% 60.4%
3587807 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.86 71.0 7.07e-01 100.0% 86.2%
4031703 101.1.4.17 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.86 73.0 7.02e-01 100.0% 82.9%
3973014 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.86 72.0 7.20e-01 100.0% 89.2%
3278834 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.86 72.0 6.93e-01 100.0% 81.4%
3591055 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.85 68.0 5.72e-01 100.0% 52.4%
3590480 101.1.4.17 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.84 68.0 5.70e-01 100.0% 52.4%
1185984 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.84 76.0 6.72e-01 100.0% 76.7%
3603069 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.84 72.0 6.97e-01 96.8% 82.9%
381796 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.84 70.0 5.43e-01 100.0% 43.5%
4034164 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.84 75.0 5.95e-01 100.0% 52.8%
3985012 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.84 67.0 6.35e-01 100.0% 73.3%
4075146 101.1.4.18 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.83 73.0 5.67e-01 100.0% 46.2%
1867991 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.83 74.0 6.85e-01 100.0% 82.5%
3059487 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.82 73.0 6.48e-01 100.0% 70.9%
428838 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.81 72.0 5.65e-01 100.0% 52.7%
3284483 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.81 67.0 5.30e-01 90.5% 50.4%
4946761 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.79 64.0 6.23e-01 88.9% 82.9%
5030212 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.79 72.0 6.95e-01 100.0% 90.0%
4234863 101.1.4.17 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.78 69.0 6.48e-01 100.0% 81.3%
410670 101.1.4.18 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.78 71.0 6.34e-01 100.0% 81.4%
3987782 101.1.4.16 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_25 0.75 68.0 5.79e-01 100.0% 65.0%
3743197 101.1.1.94 alpha arrays › HTH › HTH › Three-helical HTH › Reb1_MybAD 0.73 43.0 3.96e-01 100.0% 46.3%
5028710 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.72 64.0 6.01e-01 100.0% 82.7%
4999897 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.70 61.0 5.81e-01 100.0% 84.0%