←Back to structures
AF323671.1__AAK08422.1__X__00018
Bact-VirAF323671.1__AAK08422.1__X__00018
Identity
- Accession:
- AF323671 ↗
- Kingdom:
- phage
Quality
88.7
mean pLDDT
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 41-87
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4r24B00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.78 | 65.0 | 5.44e-01 | 100.0% | 54.1% |
| 3qaoA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.77 | 65.0 | 4.69e-01 | 100.0% | 34.3% |
| 3gpvA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.74 | 63.0 | 4.84e-01 | 100.0% | 45.1% |
| 6hn7B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 62.0 | 5.54e-01 | 100.0% | 66.7% |
| 2dk5A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 57.0 | 5.19e-01 | 93.6% | 72.7% |
| 3ez2A01 | 1.10.1660.30 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.70 | 58.0 | 5.26e-01 | 100.0% | 74.3% |
| 1z4hA01 | 1.10.238.160 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › | 0.69 | 57.0 | 5.43e-01 | 100.0% | 79.3% |
| 5eriA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 57.0 | 4.05e-01 | 100.0% | 33.3% |
| 1zarA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 56.0 | 4.62e-01 | 100.0% | 57.3% |
| 2nyxB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 54.0 | 3.97e-01 | 100.0% | 38.0% |
| 6qpqB00 | 1.10.10.580 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E | 0.65 | 55.0 | 4.66e-01 | 100.0% | 72.8% |
| 2lsoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 54.0 | 4.61e-01 | 100.0% | 67.5% |
| 2qlzA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 49.0 | 4.53e-01 | 89.4% | 65.1% |
| 2f2eA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 54.0 | 4.47e-01 | 100.0% | 59.3% |
| 1aroP05 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.57 | 42.0 | 2.84e-01 | 87.2% | 67.9% |
| 2w82A03 | 1.10.10.1190 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Antirestriction protein ArdA, domain 3 | 0.53 | 43.0 | 4.06e-01 | 100.0% | 96.8% |
| 2dulA02 | 3.30.56.70 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › N2,N2-dimethylguanosine tRNA methyltransferase, C-terminal domain | 0.52 | 41.0 | 3.94e-01 | 100.0% | 84.7% |
| 3a0rA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 40.0 | 3.31e-01 | 100.0% | 84.9% |
| 5znqA00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 36.0 | 2.52e-01 | 78.7% | 92.3% |
| 4by6D02 | 1.25.40.800 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.50 | 36.0 | 2.39e-01 | 80.9% | 22.7% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3281621 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.79 | 69.0 | 6.56e-01 | 100.0% | 87.3% |
| 2832710 | 101.1.9.11 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Phage_Nu1 | 0.77 | 66.0 | 6.30e-01 | 100.0% | 85.7% |
| 3587304 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.75 | 59.0 | 5.02e-01 | 100.0% | 51.8% |
| 5049563 | 109.4.1.198 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 | 0.71 | 62.0 | 3.45e-01 | 100.0% | 8.5% |
| 4941357 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 62.0 | 5.21e-01 | 100.0% | 66.3% |
| 5047052 | 101.1.2.673 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N | 0.70 | 58.0 | 3.98e-01 | 93.6% | 26.8% |
| 3952885 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.68 | 56.0 | 5.59e-01 | 97.9% | 92.0% |
| 3798605 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 52.0 | 4.78e-01 | 100.0% | 67.7% |
| 3404482 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.64 | 52.0 | 4.64e-01 | 100.0% | 70.7% |
| 3626029 | 4351.1.1.1 ↗ | alpha arrays › ATP12-like › ATP12-like › ATP12-like › ATP12 | 0.61 | 44.0 | 2.84e-01 | 78.7% | 72.0% |
| 3961156 | 7581.1.1.19 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Thiolase_N+Thiolase_C | 0.61 | 43.0 | 2.73e-01 | 76.6% | 85.0% |
| 5012277 | 101.1.2.904 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_38 | 0.61 | 51.0 | 4.48e-01 | 100.0% | 70.7% |
| 3675805 | 101.1.2.245 ↗ | alpha arrays › HTH › HTH › winged helix domain › PORR | 0.61 | 50.0 | 3.92e-01 | 100.0% | 67.8% |
| 3641521 | 101.1.2.79 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_I_A49 | 0.60 | 45.0 | 4.05e-01 | 93.6% | 56.0% |
| 4022000 | 101.1.2.79 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_I_A49 | 0.59 | 46.0 | 4.07e-01 | 87.2% | 67.1% |
| 3262891 | 101.1.2.79 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_I_A49 | 0.55 | 39.0 | 3.73e-01 | 93.6% | 63.1% |
| 3935655 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.54 | 39.0 | 3.36e-01 | 80.9% | 77.5% |
| 3700654 | 6110.1.1.1 ↗ | alpha superhelices › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › DHC_N2 | 0.52 | 35.0 | 2.07e-01 | 72.3% | 8.6% |
| 3921187 | 320.4.1.7 ↗ | a+b two layers › R3H domain-like › PUB domain › PUB domain › PF26117 | 0.52 | 41.0 | 2.82e-01 | 100.0% | 22.7% |
| 4408929 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.50 | 37.0 | 2.44e-01 | 83.0% | 24.1% |