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AF323672.1__AAK08440.1__X__00008

Bact-Vir

AF323672.1__AAK08440.1__X__00008

Identity

Accession:
AF323672 ↗
Kingdom:
phage

Quality

92.7 mean pLDDT

Taxonomy

TaxID: 151534

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 36-88
PDB
Domain cluster: representative
CATH (50)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3gpvA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.75 64.0 5.06e-01 100.0% 50.4%
2zhgA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.69 59.0 4.63e-01 100.0% 43.8%
3gp4B00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.69 58.0 4.45e-01 100.0% 41.5%
5i41B00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.68 56.0 5.34e-01 98.1% 97.0%
2dk5A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 54.0 5.09e-01 88.7% 74.2%
3hh0A01 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.68 57.0 5.24e-01 100.0% 93.1%
2pg4A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 59.0 4.99e-01 100.0% 62.6%
4xrfA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 58.0 4.32e-01 100.0% 40.8%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 56.0 4.59e-01 94.3% 58.0%
3l09A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 53.0 4.61e-01 88.7% 60.7%
4rs8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 58.0 5.04e-01 100.0% 65.5%
5d8cA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.67 55.0 4.34e-01 100.0% 42.9%
4hqeA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 55.0 4.46e-01 94.3% 56.2%
4hw0C00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 57.0 4.81e-01 100.0% 59.1%
1p4xA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 56.0 4.37e-01 100.0% 48.0%
2nyxB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 57.0 4.25e-01 100.0% 40.8%
6qpqB00 1.10.10.580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E 0.66 56.0 4.98e-01 100.0% 77.8%
2hoeA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 51.0 4.95e-01 84.9% 81.0%
4rayA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 52.0 4.51e-01 88.7% 61.2%
4esbA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 58.0 4.67e-01 100.0% 64.1%
3ez2A01 1.10.1660.30 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.66 53.0 5.02e-01 100.0% 82.9%
3l9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 56.0 4.81e-01 100.0% 76.4%
1p4xA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 57.0 4.38e-01 100.0% 50.4%
3aafA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 55.0 4.50e-01 100.0% 78.9%
3m8eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 56.0 4.61e-01 100.0% 54.5%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 56.0 4.18e-01 100.0% 39.3%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 55.0 4.14e-01 100.0% 42.3%
2qlzA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 46.0 4.38e-01 83.0% 66.7%
7xc2A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 56.0 4.47e-01 100.0% 66.0%
2obpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 52.0 4.68e-01 100.0% 69.1%
1lnwF01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 53.0 4.08e-01 100.0% 41.1%
3broD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 53.0 4.04e-01 100.0% 43.3%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 51.0 4.24e-01 98.1% 54.8%
2f2eA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 53.0 4.49e-01 100.0% 62.6%
3qyfA03 1.10.10.1690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Uncharacterised CRISPR-associated protein family, UPF0236 0.62 46.0 4.47e-01 100.0% 72.1%
5dcaA11 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 53.0 4.31e-01 100.0% 81.0%
2fxaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 51.0 3.73e-01 100.0% 33.3%
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.61 32.0 2.52e-01 100.0% 25.7%
6uvuA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 50.0 4.14e-01 100.0% 51.0%
2wteA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 51.0 4.67e-01 100.0% 73.6%
2pexA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 50.0 3.71e-01 94.3% 37.5%
2gqfA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 51.0 3.32e-01 100.0% 28.1%
2x49A02 3.40.5.40 Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › FHIPEP family, domain 2 0.59 40.0 4.18e-01 92.5% 79.2%
5zyrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 50.0 3.61e-01 100.0% 33.8%
3euhC02 1.10.10.2260 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MukE-like family, C-terminal domain 0.55 45.0 3.71e-01 96.2% 72.2%
4qbuA03 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.53 46.0 4.31e-01 100.0% 86.4%
2ganA02 6.20.300.10 Special › Other non-globular › CbiD-like › 0.52 33.0 3.52e-01 73.6% 84.6%
1i6aA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.50 43.0 3.49e-01 100.0% 97.2%
2mkyA00 3.30.70.1530 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 0.50 41.0 4.09e-01 100.0% 100.0%
6ui4A01 1.20.120.720 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain 0.50 43.0 3.69e-01 100.0% 72.7%
ECOD (63)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2832710 101.1.9.11 alpha arrays › HTH › HTH › Putative DNA-binding domain › Phage_Nu1 0.76 65.0 6.47e-01 100.0% 94.6%
3281621 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.72 61.0 6.12e-01 100.0% 94.5%
3589820 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.71 60.0 4.63e-01 98.1% 42.4%
2701215 1166.1.1.1 alpha arrays › Potassium-transporting ATPase KdpC subunit › Potassium-transporting ATPase KdpC subunit › Potassium-transporting ATPase KdpC subunit › KdpC 0.71 63.0 4.25e-01 100.0% 31.1%
5058806 101.1.2.111 alpha arrays › HTH › HTH › winged helix domain › RQC 0.70 60.0 4.82e-01 100.0% 74.5%
3426878 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.70 61.0 4.98e-01 100.0% 69.0%
4470278 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.70 58.0 4.63e-01 98.1% 46.1%
3842720 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 56.0 4.87e-01 88.7% 61.3%
5031727 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.70 61.0 5.04e-01 100.0% 58.9%
5070584 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.69 61.0 5.13e-01 100.0% 66.7%
4666975 1166.1.1.0 alpha arrays › Potassium-transporting ATPase KdpC subunit › Potassium-transporting ATPase KdpC subunit › Potassium-transporting ATPase KdpC subunit 0.69 60.0 4.10e-01 98.1% 30.5%
4045825 1166.1.1.1 alpha arrays › Potassium-transporting ATPase KdpC subunit › Potassium-transporting ATPase KdpC subunit › Potassium-transporting ATPase KdpC subunit › KdpC 0.69 61.0 4.21e-01 100.0% 32.8%
3670673 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.69 60.0 4.78e-01 100.0% 59.1%
3524337 101.1.2.288 alpha arrays › HTH › HTH › winged helix domain › Stk19 0.68 54.0 4.78e-01 88.7% 61.3%
3954861 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.68 57.0 5.70e-01 100.0% 96.4%
3310294 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.68 55.0 3.94e-01 94.3% 40.6%
2775358 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.67 55.0 4.49e-01 98.1% 48.2%
5025922 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.67 59.0 5.19e-01 100.0% 75.0%
5066770 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.67 56.0 4.63e-01 94.3% 57.9%
4564454 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.66 56.0 4.62e-01 100.0% 53.3%
5049162 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.66 57.0 4.04e-01 100.0% 37.6%
4093685 1166.1.1.1 alpha arrays › Potassium-transporting ATPase KdpC subunit › Potassium-transporting ATPase KdpC subunit › Potassium-transporting ATPase KdpC subunit › KdpC 0.66 59.0 3.98e-01 100.0% 30.6%
5001357 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 58.0 4.70e-01 100.0% 75.0%
5031483 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 55.0 4.06e-01 100.0% 36.8%
5028561 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.65 56.0 4.49e-01 100.0% 50.9%
4937876 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.65 56.0 4.31e-01 100.0% 49.6%
4251909 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.65 55.0 4.83e-01 100.0% 72.9%
3282985 101.1.2.508 alpha arrays › HTH › HTH › winged helix domain › PF25872 0.65 56.0 4.85e-01 100.0% 65.9%
3434870 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.65 56.0 4.94e-01 100.0% 85.0%
3960412 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 55.0 4.15e-01 100.0% 45.7%
3351739 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.64 56.0 3.98e-01 100.0% 40.0%
5013440 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 53.0 3.98e-01 96.2% 42.1%
3951258 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.64 55.0 4.03e-01 100.0% 42.7%
3273469 101.1.2.281 alpha arrays › HTH › HTH › winged helix domain › Tfb2 0.63 53.0 4.58e-01 94.3% 65.1%
2725 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 52.0 4.68e-01 100.0% 69.1%
4971669 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 54.0 4.00e-01 100.0% 41.4%
3381258 101.1.2.245 alpha arrays › HTH › HTH › winged helix domain › PORR 0.62 53.0 3.71e-01 100.0% 82.2%
4971296 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 53.0 4.68e-01 100.0% 70.0%
4973627 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.62 51.0 4.04e-01 100.0% 53.6%
4968989 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 47.0 4.15e-01 88.7% 57.6%
4968041 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.61 52.0 3.86e-01 100.0% 85.5%
3287283 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 49.0 3.97e-01 94.3% 51.8%
5046626 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.60 49.0 3.61e-01 94.3% 41.9%
3491348 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 50.0 4.42e-01 100.0% 76.5%
5012277 101.1.2.904 alpha arrays › HTH › HTH › winged helix domain › HTH_38 0.60 48.0 4.46e-01 100.0% 74.7%
5030617 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 50.0 4.19e-01 100.0% 57.0%
5019306 101.1.2.672 alpha arrays › HTH › HTH › winged helix domain › PF28603 0.60 50.0 4.39e-01 100.0% 67.1%
3364232 101.1.2.65 alpha arrays › HTH › HTH › winged helix domain › Rad21_Rec8 0.59 50.0 4.35e-01 100.0% 67.1%
3710532 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.59 32.0 2.55e-01 100.0% 26.7%
3946321 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 44.0 4.25e-01 96.2% 70.8%
5003399 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 49.0 4.30e-01 100.0% 67.1%
3641521 101.1.2.79 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_I_A49 0.58 44.0 4.07e-01 90.6% 61.3%
4959047 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 47.0 4.30e-01 94.3% 74.7%
5020992 101.1.2.728 alpha arrays › HTH › HTH › winged helix domain › PF31122 0.58 50.0 4.00e-01 100.0% 50.0%
4027679 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.58 32.0 2.53e-01 100.0% 26.7%
3229643 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.58 32.0 2.46e-01 100.0% 23.3%
3691686 3860.1.1.0 alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm 0.57 48.0 3.63e-01 100.0% 40.0%
5075009 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 48.0 4.09e-01 100.0% 64.2%
3921187 320.4.1.7 a+b two layers › R3H domain-like › PUB domain › PUB domain › PF26117 0.55 44.0 3.10e-01 100.0% 25.0%
4557681 101.1.2.92 alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.55 44.0 4.06e-01 100.0% 77.5%
4881814 5104.1.1.2 a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › CDC45 0.55 39.0 3.97e-01 75.5% 78.4%
3626029 4351.1.1.1 alpha arrays › ATP12-like › ATP12-like › ATP12-like › ATP12 0.52 42.0 2.89e-01 100.0% 46.9%
3464717 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.51 42.0 2.69e-01 100.0% 17.1%