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AF323672.1__AAK08452.1__X__00020

Bact-Vir

AF323672.1__AAK08452.1__X__00020

Identity

Accession:
AF323672 ↗
Kingdom:
phage

Quality

89.2 mean pLDDT

Taxonomy

TaxID: 151534

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-95
PDB
Domain cluster: representative
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3hi2B00 3.30.2310.40 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › 0.83 77.0 7.43e-01 98.9% 94.8%
3u97A00 3.10.450.530 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 0.67 52.0 5.55e-01 89.9% 96.1%
2gu3A02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 44.0 4.93e-01 100.0% 95.2%
2gu3A01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 43.0 4.90e-01 100.0% 95.4%
2otrA00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.64 53.0 5.32e-01 89.9% 94.4%
4kcaA02 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.64 57.0 3.74e-01 100.0% 31.8%
1ospO01 2.40.128.160 Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) 0.64 35.0 3.33e-01 96.6% 43.8%
2m7oA00 3.10.450.400 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Uncharacterised protein PF15513, DUF4651 0.64 40.0 4.39e-01 100.0% 80.0%
7vd7A01 3.10.450.530 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 0.63 52.0 5.16e-01 89.9% 88.0%
3nqzA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 48.0 4.95e-01 100.0% 89.3%
3kh8A02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.59 41.0 3.60e-01 71.9% 92.5%
2kc8A00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.59 49.0 4.79e-01 91.0% 84.2%
4mp8A01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.58 41.0 3.46e-01 75.3% 62.7%
5hp6A01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.58 50.0 3.48e-01 100.0% 37.3%
4hz9B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 50.0 4.59e-01 100.0% 94.3%
1wmiA00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.58 47.0 4.82e-01 91.0% 95.5%
3g5oC00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.57 49.0 5.00e-01 97.8% 96.6%
4xrtA01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 40.0 3.47e-01 100.0% 45.8%
3kztA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 49.0 4.37e-01 97.8% 89.4%
8gq6A01 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.57 46.0 3.19e-01 100.0% 26.3%
3sreA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.56 49.0 3.38e-01 100.0% 29.2%
2kheA00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.55 46.0 4.67e-01 93.3% 93.3%
4ebgA00 3.10.450.560 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 42.0 4.15e-01 96.6% 77.3%
5tgnA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 48.0 4.55e-01 100.0% 93.6%
4fczA00 3.10.450.710 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Tgt2/MlaC 0.55 47.0 3.83e-01 100.0% 76.5%
2xepB01 3.10.450.280 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 47.0 4.40e-01 100.0% 83.3%
2il5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 38.0 3.15e-01 96.6% 40.7%
4xq7A01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.54 41.0 3.48e-01 83.1% 73.7%
2jq5A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 45.0 4.08e-01 97.8% 94.5%
2x6hA02 3.30.1010.10 Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 0.52 44.0 3.65e-01 93.3% 91.1%
7arcC01 3.30.460.80 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit 0.52 38.0 3.35e-01 77.5% 68.1%
4xrtA02 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 36.0 3.06e-01 96.6% 41.2%
4pj2A00 2.40.128.460 Mainly Beta › Beta Barrel › Lipocalin › Periplasmic lysozyme inhibitor of I-type lysozyme 0.52 45.0 4.13e-01 100.0% 86.0%
3fgbA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 40.0 2.73e-01 100.0% 22.1%
1pjxA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.51 41.0 2.83e-01 87.6% 85.0%
2kgtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 33.0 3.52e-01 92.1% 80.6%
1xxmC01 3.30.1450.10 Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › 0.51 36.0 3.89e-01 91.0% 89.2%
4r2xD00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.51 40.0 3.00e-01 87.6% 90.8%
1wv4B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.50 35.0 3.02e-01 73.0% 76.0%
6igbA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 45.0 2.98e-01 100.0% 25.6%
ECOD (57)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
137757 4312.1.1.9 a+b two layers › RelE-like › RelE-like › RelE-like › MqsR_toxin 0.83 77.0 7.43e-01 98.9% 94.8%
4968686 4312.1.1.15 a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 0.81 74.0 7.10e-01 100.0% 87.0%
4987659 4312.1.1.15 a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 0.78 72.0 7.23e-01 100.0% 98.9%
4968653 4312.1.1.15 a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 0.77 68.0 6.65e-01 96.6% 89.5%
5030536 4312.1.1.15 a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 0.73 64.0 6.18e-01 97.8% 85.0%
4993827 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.72 59.0 6.22e-01 97.8% 98.8%
3432730 5.1.4.277 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_EIPR1 0.71 46.0 3.00e-01 94.4% 16.1%
3797604 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.68 42.0 2.82e-01 97.8% 15.7%
5030390 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.68 53.0 5.36e-01 97.8% 84.3%
1146563 4312.1.1.1 a+b two layers › RelE-like › RelE-like › RelE-like › BrnT_toxin 0.67 52.0 5.56e-01 88.8% 96.1%
4937945 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.67 55.0 5.24e-01 88.8% 83.5%
3988706 243.3.1.13 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF5590 0.66 43.0 4.71e-01 100.0% 84.3%
3219435 243.1.1.75 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26530 0.66 58.0 4.57e-01 100.0% 54.6%
4114694 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.64 55.0 4.72e-01 93.3% 97.1%
3219433 243.1.1.75 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26530 0.64 56.0 5.08e-01 100.0% 84.0%
2057235 4312.1.1.5 a+b two layers › RelE-like › RelE-like › RelE-like › RelE 0.63 50.0 4.74e-01 85.4% 73.1%
3240258 243.1.1.75 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26530 0.63 56.0 5.09e-01 100.0% 89.2%
2060430 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.63 50.0 5.30e-01 85.4% 97.5%
3440597 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.62 52.0 5.23e-01 98.9% 93.3%
3291720 243.5.1.0 a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region 0.61 42.0 4.47e-01 100.0% 84.0%
4948982 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.61 51.0 5.18e-01 93.3% 93.3%
3811228 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.60 48.0 3.30e-01 100.0% 25.7%
3245356 5.1.3.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylesterase 0.60 54.0 3.55e-01 100.0% 29.0%
4950220 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.59 49.0 4.97e-01 93.3% 92.2%
4596146 243.1.1.104 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Imm-NTF2 0.58 52.0 4.59e-01 100.0% 90.8%
3286756 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.58 49.0 4.60e-01 97.8% 93.0%
3343550 243.1.1.53 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › WI12 0.58 52.0 4.41e-01 100.0% 69.0%
1094910 243.1.1.21 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF3828 0.58 50.0 4.59e-01 100.0% 94.3%
3628642 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 51.0 3.39e-01 100.0% 27.1%
4994192 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.57 47.0 4.89e-01 93.3% 98.8%
4937462 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.57 48.0 4.74e-01 93.3% 92.6%
5013467 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.56 46.0 3.12e-01 100.0% 25.2%
5032565 4312.1.1.10 a+b two layers › RelE-like › RelE-like › RelE-like › YafQ_toxin 0.56 46.0 4.76e-01 91.0% 96.5%
3586933 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.56 43.0 4.27e-01 83.1% 96.8%
3438347 5.1.5.63 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DUF1618 0.56 51.0 4.34e-01 100.0% 77.9%
3780836 5.1.4.257 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP, FG-GAP_3 0.56 50.0 3.22e-01 100.0% 23.4%
3321190 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.55 44.0 2.98e-01 100.0% 23.3%
5062498 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.55 45.0 4.65e-01 89.9% 95.3%
4888761 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.55 49.0 3.87e-01 100.0% 46.8%
1907494 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.55 48.0 4.55e-01 100.0% 93.6%
3794471 5.1.3.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylesterase 0.55 48.0 3.25e-01 100.0% 29.3%
3829068 5.1.3.65 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 0.55 44.0 3.31e-01 97.8% 34.3%
4937915 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.55 45.0 4.38e-01 93.3% 85.9%
4013508 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.54 49.0 3.28e-01 100.0% 28.8%
3604507 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.54 44.0 4.39e-01 89.9% 86.2%
5027871 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.54 44.0 4.38e-01 89.9% 92.5%
3394329 5.1.4.45 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_3 0.54 47.0 3.15e-01 100.0% 24.3%
4030001 5.1.4.621 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Mcl1_mid 0.54 47.0 2.81e-01 100.0% 14.0%
3744121 5.1.4.36 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N 0.53 47.0 3.09e-01 100.0% 26.2%
3711018 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.52 46.0 3.07e-01 100.0% 42.0%
3392825 59.1.3.0 beta complex topology › triple barrel › triple barrel › RNA polymerase I subunits A49/A34.5 dimerization domains 0.52 42.0 4.05e-01 100.0% 79.0%
4026002 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 45.0 3.00e-01 100.0% 24.8%
3702931 331.10.2.0 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.51 36.0 3.09e-01 76.4% 56.9%
4249355 5.1.2.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_32N 0.51 44.0 3.07e-01 100.0% 33.8%
1318584 5.1.4.418 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Lactonase 0.51 42.0 2.81e-01 97.8% 23.5%
3926118 4.1.1.223 beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.50 32.0 3.66e-01 92.1% 96.7%
3230015 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.50 44.0 2.82e-01 100.0% 23.7%